RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 CDH15P55291 814 aa11.59□□□□□ -0.55
VPS9D1-204ENST00000565023 TMEM33P57088 247 aa11.59□□□□□ -0.55
VPS9D1-204ENST00000565023 CDK5Q00535 292 aa11.59□□□□□ -0.55
VPS9D1-204ENST00000565023 TEKQ02763 1124 aa11.59□□□□□ -0.55
VPS9D1-204ENST00000565023 PSG7Q13046 419 aa11.59□□□□□ -0.55
VPS9D1-204ENST00000565023 GINS1Q14691 196 aa11.59□□□□□ -0.55
VPS9D1-204ENST00000565023 HFEQ30201 348 aa11.59□□□□□ -0.55
VPS9D1-204ENST00000565023 ACSM5Q6NUN0 579 aa11.59□□□□□ -0.55
VPS9D1-204ENST00000565023 SLC27A4Q6P1M0 643 aa11.59□□□□□ -0.55
VPS9D1-204ENST00000565023 IQCF1Q8N6M8 205 aa11.59□□□□□ -0.55
VPS9D1-204ENST00000565023 SLC37A3Q8NCC5 494 aa11.59□□□□□ -0.55
VPS9D1-204ENST00000565023 CCL17Q92583 94 aa11.59□□□□□ -0.55
VPS9D1-204ENST00000565023 HPS1Q92902 700 aa11.59□□□□□ -0.55
VPS9D1-204ENST00000565023 CMBLQ96DG6 245 aa11.59□□□□□ -0.55
VPS9D1-204ENST00000565023 RBM4Q9BWF3 364 aaKnown RBP11.59□□□□□ -0.55
VPS9D1-204ENST00000565023 SEMA6AQ9H2E6 1030 aa11.59□□□□□ -0.55
VPS9D1-204ENST00000565023 S100A14Q9HCY8 104 aa11.59□□□□□ -0.55
VPS9D1-204ENST00000565023 CMC2Q9NRP2 79 aa11.59□□□□□ -0.55
VPS9D1-204ENST00000565023 TMEM160Q9NX00 188 aa11.59□□□□□ -0.55
VPS9D1-204ENST00000565023 KIF17Q9P2E2 1029 aa11.59□□□□□ -0.55
VPS9D1-204ENST00000565023 KLHL21Q9UJP4 597 aa11.59□□□□□ -0.55
VPS9D1-204ENST00000565023 OAZ3Q9UMX2 235 aa11.59□□□□□ -0.55
VPS9D1-204ENST00000565023 LHFPL6Q9Y693 200 aa11.59□□□□□ -0.55
VPS9D1-204ENST00000565023 TANC2Q9HCD6 1990 aa11.59□□□□□ -0.55
VPS9D1-204ENST00000565023 ISPDA4D126 451 aa11.58□□□□□ -0.56
VPS9D1-204ENST00000565023 TVP23AA6NH52 213 aa11.58□□□□□ -0.56
VPS9D1-204ENST00000565023 RNF212BA8MTL3 300 aa11.58□□□□□ -0.56
VPS9D1-204ENST00000565023 CLDN25C9JDP6 229 aa11.58□□□□□ -0.56
VPS9D1-204ENST00000565023 IFNGP01579 166 aa11.58□□□□□ -0.56
VPS9D1-204ENST00000565023 TFP02787 698 aa11.58□□□□□ -0.56
VPS9D1-204ENST00000565023 POU1F1P28069 291 aa11.58□□□□□ -0.56
VPS9D1-204ENST00000565023 CRYBB2P43320 205 aa11.58□□□□□ -0.56
VPS9D1-204ENST00000565023 SLC25A1P53007 311 aa11.58□□□□□ -0.56
VPS9D1-204ENST00000565023 PRSS12P56730 875 aa11.58□□□□□ -0.56
VPS9D1-204ENST00000565023 TNFAIP6P98066 277 aaPredicted RBP11.58□□□□□ -0.56
VPS9D1-204ENST00000565023 SRSF2Q01130 221 aaKnown RBP11.58□□□□□ -0.56
VPS9D1-204ENST00000565023 CRMP1Q14194 572 aa11.58□□□□□ -0.56
VPS9D1-204ENST00000565023 KDM4DQ6B0I6 523 aa11.58□□□□□ -0.56
VPS9D1-204ENST00000565023 GJC3Q8NFK1 279 aa11.58□□□□□ -0.56
VPS9D1-204ENST00000565023 SLC26A10Q8NG04 563 aa11.58□□□□□ -0.56
VPS9D1-204ENST00000565023 OR51L1Q8NGJ5 315 aa11.58□□□□□ -0.56
VPS9D1-204ENST00000565023 OR9Q1Q8NGQ5 310 aa11.58□□□□□ -0.56
VPS9D1-204ENST00000565023 OR2T4Q8NH00 348 aa11.58□□□□□ -0.56
VPS9D1-204ENST00000565023 ELMOD3Q96FG2 381 aa11.58□□□□□ -0.56
VPS9D1-204ENST00000565023 DCLRE1CQ96SD1 692 aaKnown RBP11.58□□□□□ -0.56
VPS9D1-204ENST00000565023 CDADC1Q9BWV3 514 aa11.58□□□□□ -0.56
VPS9D1-204ENST00000565023 NMNAT2Q9BZQ4 307 aa11.58□□□□□ -0.56
VPS9D1-204ENST00000565023 WDR76Q9H967 626 aa11.58□□□□□ -0.56
VPS9D1-204ENST00000565023 SLC25A19Q9HC21 320 aa11.58□□□□□ -0.56
VPS9D1-204ENST00000565023 TBCCD1Q9NVR7 557 aa11.58□□□□□ -0.56
VPS9D1-204ENST00000565023 NKIRAS2Q9NYR9 191 aa11.58□□□□□ -0.56
VPS9D1-204ENST00000565023 PURGQ9UJV8 347 aaKnown RBP11.58□□□□□ -0.56
VPS9D1-204ENST00000565023 OR6C6A6NF89 314 aa11.57□□□□□ -0.56
VPS9D1-204ENST00000565023 RIIAD1A6NNX1 92 aa11.57□□□□□ -0.56
VPS9D1-204ENST00000565023 ZNF3P17036 446 aa11.57□□□□□ -0.56
VPS9D1-204ENST00000565023 SRP14P37108 136 aaKnown RBP11.57□□□□□ -0.56
VPS9D1-204ENST00000565023 RPS27P42677 84 aaKnown RBP11.57□□□□□ -0.56
VPS9D1-204ENST00000565023 CRISP1P54107 249 aa11.57□□□□□ -0.56
VPS9D1-204ENST00000565023 ESRRGP62508 458 aa11.57□□□□□ -0.56
VPS9D1-204ENST00000565023 MRPS11P82912 194 aaKnown RBP11.57□□□□□ -0.56
VPS9D1-204ENST00000565023 HLXQ14774 488 aaPredicted RBP11.57□□□□□ -0.56
VPS9D1-204ENST00000565023 FAM209AQ5JX71 171 aa11.57□□□□□ -0.56
VPS9D1-204ENST00000565023 LYPD4Q6UWN0 246 aa11.57□□□□□ -0.56
VPS9D1-204ENST00000565023 CFAP77Q6ZQR2 320 aa11.57□□□□□ -0.56
VPS9D1-204ENST00000565023 PROKR2Q8NFJ6 384 aa11.57□□□□□ -0.56
VPS9D1-204ENST00000565023 OR2Z1Q8NG97 314 aa11.57□□□□□ -0.56
VPS9D1-204ENST00000565023 OR2AJ1Q8NGZ0 328 aa11.57□□□□□ -0.56
VPS9D1-204ENST00000565023 PITX2Q99697 317 aa11.57□□□□□ -0.56
VPS9D1-204ENST00000565023 OSBPL10Q9BXB5 764 aa11.57□□□□□ -0.56
VPS9D1-204ENST00000565023 EGLN1Q9GZT9 426 aa11.57□□□□□ -0.56
VPS9D1-204ENST00000565023 CYSLTR2Q9NS75 346 aa11.57□□□□□ -0.56
VPS9D1-204ENST00000565023 KRT84Q9NSB2 600 aa11.57□□□□□ -0.56
VPS9D1-204ENST00000565023 DCAF16Q9NXF7 216 aa11.57□□□□□ -0.56
VPS9D1-204ENST00000565023 TMEFF2Q9UIK5 374 aaPredicted RBP11.57□□□□□ -0.56
VPS9D1-204ENST00000565023 WIPI2Q9Y4P8 454 aa11.57□□□□□ -0.56
VPS9D1-204ENST00000565023 ARHGAP32A7KAX9 2087 aa11.56□□□□□ -0.56
VPS9D1-204ENST00000565023 SAC3D1A6NKF1 404 aa11.56□□□□□ -0.56
VPS9D1-204ENST00000565023 B4DSR2 109 aa11.56□□□□□ -0.56
VPS9D1-204ENST00000565023 F5H5K5 113 aa11.56□□□□□ -0.56
VPS9D1-204ENST00000565023 H3BSA7 217 aa11.56□□□□□ -0.56
VPS9D1-204ENST00000565023 SURF4O15260 269 aa11.56□□□□□ -0.56
VPS9D1-204ENST00000565023 ICMTO60725 284 aa11.56□□□□□ -0.56
VPS9D1-204ENST00000565023 MITFO75030 526 aaPredicted RBP11.56□□□□□ -0.56
VPS9D1-204ENST00000565023 HMGN1P05114 100 aa11.56□□□□□ -0.56
VPS9D1-204ENST00000565023 GYPBP06028 91 aa11.56□□□□□ -0.56
VPS9D1-204ENST00000565023 ZNF823P16415 610 aa11.56□□□□□ -0.56
VPS9D1-204ENST00000565023 ZMAT1Q5H9K5 638 aa11.56□□□□□ -0.56
VPS9D1-204ENST00000565023 TMEM236Q5W0B7 351 aa11.56□□□□□ -0.56
VPS9D1-204ENST00000565023 OR2T2Q6IF00 324 aa11.56□□□□□ -0.56
VPS9D1-204ENST00000565023 GLCCI1Q86VQ1 547 aa11.56□□□□□ -0.56
VPS9D1-204ENST00000565023 C1orf174Q8IYL3 243 aa11.56□□□□□ -0.56
VPS9D1-204ENST00000565023 ZNRF4Q8WWF5 429 aa11.56□□□□□ -0.56
VPS9D1-204ENST00000565023 TIMD4Q96H15 378 aa11.56□□□□□ -0.56
VPS9D1-204ENST00000565023 COQ7Q99807 217 aa11.56□□□□□ -0.56
VPS9D1-204ENST00000565023 HDHD2Q9H0R4 259 aa11.56□□□□□ -0.56
VPS9D1-204ENST00000565023 UBAP1Q9NZ09 502 aa11.56□□□□□ -0.56
VPS9D1-204ENST00000565023 ENOPH1Q9UHY7 261 aa11.56□□□□□ -0.56
VPS9D1-204ENST00000565023 IGHV3-64DA0A0J9YX35 117 aa11.55□□□□□ -0.56
VPS9D1-204ENST00000565023 PHF1O43189 567 aaPredicted RBP11.55□□□□□ -0.56
VPS9D1-204ENST00000565023 SPI1P17947 270 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms