RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 KRTAP27-1Q3LI81 207 aa12.63□□□□□ -0.39
SPG7-210ENST00000564409 ESCO2Q56NI9 601 aa12.63□□□□□ -0.39
SPG7-210ENST00000564409 C16orf89Q6UX73 402 aa12.63□□□□□ -0.39
SPG7-210ENST00000564409 C1orf87Q8N0U7 546 aa12.63□□□□□ -0.39
SPG7-210ENST00000564409 CELF2-AS1Q8N7Q2 184 aa12.63□□□□□ -0.39
SPG7-210ENST00000564409 GNPDA2Q8TDQ7 276 aa12.63□□□□□ -0.39
SPG7-210ENST00000564409 GCDHQ92947 438 aaPredicted RBP12.63□□□□□ -0.39
SPG7-210ENST00000564409 TSSK2Q96PF2 358 aa12.63□□□□□ -0.39
SPG7-210ENST00000564409 NMNAT3Q96T66 252 aa12.63□□□□□ -0.39
SPG7-210ENST00000564409 SLC30A2Q9BRI3 323 aa12.63□□□□□ -0.39
SPG7-210ENST00000564409 C1QTNF5Q9BXJ0 243 aa12.63□□□□□ -0.39
SPG7-210ENST00000564409 FAM107BQ9H098 131 aa12.63□□□□□ -0.39
SPG7-210ENST00000564409 PTTG3PQ9NZH4 202 aa12.63□□□□□ -0.39
SPG7-210ENST00000564409 TAGLN3Q9UI15 199 aa12.63□□□□□ -0.39
SPG7-210ENST00000564409 NOP16Q9Y3C1 178 aaKnown RBP12.63□□□□□ -0.39
SPG7-210ENST00000564409 LRRC30A6NM36 301 aa12.62□□□□□ -0.39
SPG7-210ENST00000564409 ARPC2O15144 300 aa12.62□□□□□ -0.39
SPG7-210ENST00000564409 PPIAL4GP0DN37 164 aa12.62□□□□□ -0.39
SPG7-210ENST00000564409 ZNF12P17014 697 aa12.62□□□□□ -0.39
SPG7-210ENST00000564409 ZFP36P26651 326 aaKnown RBP12.62□□□□□ -0.39
SPG7-210ENST00000564409 RRM2P31350 389 aa12.62□□□□□ -0.39
SPG7-210ENST00000564409 MMP16P51512 607 aa12.62□□□□□ -0.39
SPG7-210ENST00000564409 HMGA2P52926 109 aa12.62□□□□□ -0.39
SPG7-210ENST00000564409 MALLQ13021 153 aa12.62□□□□□ -0.39
SPG7-210ENST00000564409 ZNF154Q13106 437 aa12.62□□□□□ -0.39
SPG7-210ENST00000564409 HLXQ14774 488 aaPredicted RBP12.62□□□□□ -0.39
SPG7-210ENST00000564409 OR2T2Q6IF00 324 aa12.62□□□□□ -0.39
SPG7-210ENST00000564409 SLC18B1Q6NT16 456 aa12.62□□□□□ -0.39
SPG7-210ENST00000564409 RBMS3Q6XE24 437 aaKnown RBP12.62□□□□□ -0.39
SPG7-210ENST00000564409 OR52L1Q8NGH7 329 aa12.62□□□□□ -0.39
SPG7-210ENST00000564409 OR4K13Q8NH42 304 aa12.62□□□□□ -0.39
SPG7-210ENST00000564409 ERGIC1Q969X5 290 aa12.62□□□□□ -0.39
SPG7-210ENST00000564409 ZMYND19Q96E35 227 aaPredicted RBP12.62□□□□□ -0.39
SPG7-210ENST00000564409 MEGF10Q96KG7 1140 aa12.62□□□□□ -0.39
SPG7-210ENST00000564409 CDRT15Q96T59 188 aa12.62□□□□□ -0.39
SPG7-210ENST00000564409 PITX2Q99697 317 aa12.62□□□□□ -0.39
SPG7-210ENST00000564409 ATF6BQ99941 703 aa12.62□□□□□ -0.39
SPG7-210ENST00000564409 MRI1Q9BV20 369 aa12.62□□□□□ -0.39
SPG7-210ENST00000564409 ZMAT3Q9HA38 289 aaKnown RBP12.62□□□□□ -0.39
SPG7-210ENST00000564409 RPRD1BQ9NQG5 326 aaKnown RBP12.62□□□□□ -0.39
SPG7-210ENST00000564409 TMEM100Q9NV29 134 aa12.62□□□□□ -0.39
SPG7-210ENST00000564409 DCAF16Q9NXF7 216 aa12.62□□□□□ -0.39
SPG7-210ENST00000564409 MIOXQ9UGB7 285 aa12.62□□□□□ -0.39
SPG7-210ENST00000564409 OR5V1Q9UGF6 321 aa12.62□□□□□ -0.39
SPG7-210ENST00000564409 CYB5R1Q9UHQ9 305 aa12.62□□□□□ -0.39
SPG7-210ENST00000564409 ARL2BPQ9Y2Y0 163 aa12.62□□□□□ -0.39
SPG7-210ENST00000564409 AUP1Q9Y679 476 aa12.62□□□□□ -0.39
SPG7-210ENST00000564409 DCTN3O75935 186 aa12.61□□□□□ -0.39
SPG7-210ENST00000564409 HLA-DQA2P01906 255 aa12.61□□□□□ -0.39
SPG7-210ENST00000564409 ACSM4P0C7M7 580 aa12.61□□□□□ -0.39
SPG7-210ENST00000564409 CFPP27918 469 aa12.61□□□□□ -0.39
SPG7-210ENST00000564409 GATA4P43694 442 aa12.61□□□□□ -0.39
SPG7-210ENST00000564409 TPTEP56180 551 aa12.61□□□□□ -0.39
SPG7-210ENST00000564409 MEP1BQ16820 701 aa12.61□□□□□ -0.39
SPG7-210ENST00000564409 RSPO1Q2MKA7 263 aaPredicted RBP12.61□□□□□ -0.39
SPG7-210ENST00000564409 TUSC1Q2TAM9 212 aa12.61□□□□□ -0.39
SPG7-210ENST00000564409 ARMCX4Q5H9R4 360 aa12.61□□□□□ -0.39
SPG7-210ENST00000564409 CORO6Q6QEF8 472 aa12.61□□□□□ -0.39
SPG7-210ENST00000564409 ZNF620Q6ZNG0 422 aa12.61□□□□□ -0.39
SPG7-210ENST00000564409 ZDHHC21Q8IVQ6 265 aa12.61□□□□□ -0.39
SPG7-210ENST00000564409 OR5AS1Q8N127 324 aa12.61□□□□□ -0.39
SPG7-210ENST00000564409 DEFB108BQ8NET1 73 aa12.61□□□□□ -0.39
SPG7-210ENST00000564409 DVL3Q92997 716 aaPredicted RBP12.61□□□□□ -0.39
SPG7-210ENST00000564409 PLEKHA8Q96JA3 519 aa12.61□□□□□ -0.39
SPG7-210ENST00000564409 SLC6A7Q99884 636 aa12.61□□□□□ -0.39
SPG7-210ENST00000564409 SLC22A4Q9H015 551 aa12.61□□□□□ -0.39
SPG7-210ENST00000564409 NUP50Q9UKX7 468 aa12.61□□□□□ -0.39
SPG7-210ENST00000564409 INSIG2Q9Y5U4 225 aa12.61□□□□□ -0.39
SPG7-210ENST00000564409 V9GYQ6 96 aa12.61□□□□□ -0.39
SPG7-210ENST00000564409 NBEAL1Q6ZS30 2694 aa12.61□□□□□ -0.39
SPG7-210ENST00000564409 OR6C68A6NDL8 312 aa12.6□□□□□ -0.39
SPG7-210ENST00000564409 TRAPPC2LH3BP13 241 aa12.6□□□□□ -0.39
SPG7-210ENST00000564409 WNT2P09544 360 aa12.6□□□□□ -0.39
SPG7-210ENST00000564409 ZNF823P16415 610 aa12.6□□□□□ -0.39
SPG7-210ENST00000564409 GGT2P36268 569 aa12.6□□□□□ -0.39
SPG7-210ENST00000564409 ERFP50548 548 aa12.6□□□□□ -0.39
SPG7-210ENST00000564409 OTPQ5XKR4 325 aa12.6□□□□□ -0.39
SPG7-210ENST00000564409 PGBD2Q6P3X8 592 aa12.6□□□□□ -0.39
SPG7-210ENST00000564409 ZNF771Q7L3S4 317 aaPredicted RBP12.6□□□□□ -0.39
SPG7-210ENST00000564409 ARHGAP24Q8N264 748 aa12.6□□□□□ -0.39
SPG7-210ENST00000564409 C3orf56Q8N813 242 aa12.6□□□□□ -0.39
SPG7-210ENST00000564409 OR2T4Q8NH00 348 aa12.6□□□□□ -0.39
SPG7-210ENST00000564409 SPTSSAQ969W0 71 aa12.6□□□□□ -0.39
SPG7-210ENST00000564409 TRIM15Q9C019 465 aa12.6□□□□□ -0.39
SPG7-210ENST00000564409 DDX28Q9NUL7 540 aaKnown RBP12.6□□□□□ -0.39
SPG7-210ENST00000564409 IL20Q9NYY1 176 aa12.6□□□□□ -0.39
SPG7-210ENST00000564409 CDH10Q9Y6N8 788 aa12.6□□□□□ -0.39
SPG7-210ENST00000564409 CEACAM18A8MTB9 384 aa12.59□□□□□ -0.39
SPG7-210ENST00000564409 F5H5K5 113 aa12.59□□□□□ -0.39
SPG7-210ENST00000564409 RGS9O75916 674 aaPredicted RBP12.59□□□□□ -0.39
SPG7-210ENST00000564409 GPANK1O95872 356 aa12.59□□□□□ -0.39
SPG7-210ENST00000564409 LCATP04180 440 aa12.59□□□□□ -0.39
SPG7-210ENST00000564409 IRF2P14316 349 aa12.59□□□□□ -0.39
SPG7-210ENST00000564409 PAX8Q06710 450 aa12.59□□□□□ -0.39
SPG7-210ENST00000564409 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.59□□□□□ -0.39
SPG7-210ENST00000564409 TRAP1Q12931 704 aaKnown RBP12.59□□□□□ -0.39
SPG7-210ENST00000564409 GK2Q14410 553 aaPredicted RBP12.59□□□□□ -0.39
SPG7-210ENST00000564409 LRRN1Q6UXK5 716 aa12.59□□□□□ -0.39
SPG7-210ENST00000564409 CFAP77Q6ZQR2 320 aa12.59□□□□□ -0.39
SPG7-210ENST00000564409 DOK3Q7L591 496 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms