RNA–Protein interactions for RNA: ENST00000563842.5

CLK3-213, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-213ENST00000563842 GLCEO94923 617 aa11.41□□□□□ -0.58
CLK3-213ENST00000563842 IGHV1-46P01743 117 aa11.41□□□□□ -0.58
CLK3-213ENST00000563842 GYPBP06028 91 aa11.41□□□□□ -0.58
CLK3-213ENST00000563842 SPARCP09486 303 aa11.41□□□□□ -0.58
CLK3-213ENST00000563842 LYNX1P0DP58 116 aa11.41□□□□□ -0.58
CLK3-213ENST00000563842 SELEP16581 610 aa11.41□□□□□ -0.58
CLK3-213ENST00000563842 HOXB4P17483 251 aaPredicted RBP11.41□□□□□ -0.58
CLK3-213ENST00000563842 COL8A2P25067 703 aa11.41□□□□□ -0.58
CLK3-213ENST00000563842 CDK5Q00535 292 aa11.41□□□□□ -0.58
CLK3-213ENST00000563842 SLC3A1Q07837 685 aa11.41□□□□□ -0.58
CLK3-213ENST00000563842 MALLQ13021 153 aa11.41□□□□□ -0.58
CLK3-213ENST00000563842 TSTQ16762 297 aaKnown RBP11.41□□□□□ -0.58
CLK3-213ENST00000563842 PCK2Q16822 640 aa11.41□□□□□ -0.58
CLK3-213ENST00000563842 HFEQ30201 348 aa11.41□□□□□ -0.58
CLK3-213ENST00000563842 ACSM5Q6NUN0 579 aa11.41□□□□□ -0.58
CLK3-213ENST00000563842 COLCA1Q6ZS62 124 aa11.41□□□□□ -0.58
CLK3-213ENST00000563842 ASRGL1Q7L266 308 aa11.41□□□□□ -0.58
CLK3-213ENST00000563842 SHFQ7M4L6 423 aa11.41□□□□□ -0.58
CLK3-213ENST00000563842 ZDHHC13Q8IUH4 622 aa11.41□□□□□ -0.58
CLK3-213ENST00000563842 C10orf67Q8IYJ2 551 aa11.41□□□□□ -0.58
CLK3-213ENST00000563842 PARP8Q8N3A8 854 aa11.41□□□□□ -0.58
CLK3-213ENST00000563842 IQCF1Q8N6M8 205 aa11.41□□□□□ -0.58
CLK3-213ENST00000563842 HPS1Q92902 700 aa11.41□□□□□ -0.58
CLK3-213ENST00000563842 CMBLQ96DG6 245 aa11.41□□□□□ -0.58
CLK3-213ENST00000563842 HCAR1Q9BXC0 346 aa11.41□□□□□ -0.58
CLK3-213ENST00000563842 PRRG3Q9BZD7 231 aa11.41□□□□□ -0.58
CLK3-213ENST00000563842 NTN4Q9HB63 628 aa11.41□□□□□ -0.58
CLK3-213ENST00000563842 SLC25A19Q9HC21 320 aa11.41□□□□□ -0.58
CLK3-213ENST00000563842 PAPOLBQ9NRJ5 636 aaKnown RBP11.41□□□□□ -0.58
CLK3-213ENST00000563842 ZNF275Q9NSD4 429 aaPredicted RBP11.41□□□□□ -0.58
CLK3-213ENST00000563842 ENOPH1Q9UHY7 261 aa11.41□□□□□ -0.58
CLK3-213ENST00000563842 G3V2T6 193 aa11.4□□□□□ -0.58
CLK3-213ENST00000563842 M0R135 149 aa11.4□□□□□ -0.58
CLK3-213ENST00000563842 PPIHO43447 177 aaKnown RBP11.4□□□□□ -0.58
CLK3-213ENST00000563842 LILRA1O75019 489 aa11.4□□□□□ -0.58
CLK3-213ENST00000563842 APOC1P02654 83 aa11.4□□□□□ -0.58
CLK3-213ENST00000563842 LCATP04180 440 aa11.4□□□□□ -0.58
CLK3-213ENST00000563842 CD55P08174 381 aa11.4□□□□□ -0.58
CLK3-213ENST00000563842 ACSM4P0C7M7 580 aa11.4□□□□□ -0.58
CLK3-213ENST00000563842 IGHV4-31P0DP07 118 aa11.4□□□□□ -0.58
CLK3-213ENST00000563842 SLC15A1P46059 708 aa11.4□□□□□ -0.58
CLK3-213ENST00000563842 CRISP1P54107 249 aa11.4□□□□□ -0.58
CLK3-213ENST00000563842 ESRRGP62508 458 aa11.4□□□□□ -0.58
CLK3-213ENST00000563842 CDK5R2Q13319 367 aa11.4□□□□□ -0.58
CLK3-213ENST00000563842 CCNIQ14094 377 aa11.4□□□□□ -0.58
CLK3-213ENST00000563842 TAF13Q15543 124 aa11.4□□□□□ -0.58
CLK3-213ENST00000563842 KRTAP27-1Q3LI81 207 aa11.4□□□□□ -0.58
CLK3-213ENST00000563842 C6orf52Q5T4I8 152 aa11.4□□□□□ -0.58
CLK3-213ENST00000563842 FAHD1Q6P587 224 aa11.4□□□□□ -0.58
CLK3-213ENST00000563842 USP51Q70EK9 711 aa11.4□□□□□ -0.58
CLK3-213ENST00000563842 DCXRQ7Z4W1 244 aa11.4□□□□□ -0.58
CLK3-213ENST00000563842 ZNF511Q8NB15 262 aa11.4□□□□□ -0.58
CLK3-213ENST00000563842 ZNRF4Q8WWF5 429 aa11.4□□□□□ -0.58
CLK3-213ENST00000563842 YIPF5Q969M3 257 aa11.4□□□□□ -0.58
CLK3-213ENST00000563842 ZNF799Q96GE5 643 aa11.4□□□□□ -0.58
CLK3-213ENST00000563842 TIMD4Q96H15 378 aa11.4□□□□□ -0.58
CLK3-213ENST00000563842 MAP6Q96JE9 813 aa11.4□□□□□ -0.58
CLK3-213ENST00000563842 INTS14Q96SY0 518 aa11.4□□□□□ -0.58
CLK3-213ENST00000563842 OR51V1Q9H2C8 321 aa11.4□□□□□ -0.58
CLK3-213ENST00000563842 WDR76Q9H967 626 aa11.4□□□□□ -0.58
CLK3-213ENST00000563842 PNRC2Q9NPJ4 139 aaKnown RBP11.4□□□□□ -0.58
CLK3-213ENST00000563842 DDX28Q9NUL7 540 aaKnown RBP11.4□□□□□ -0.58
CLK3-213ENST00000563842 PTTG3PQ9NZH4 202 aa11.4□□□□□ -0.58
CLK3-213ENST00000563842 DOCK11Q5JSL3 2073 aa11.4□□□□□ -0.58
CLK3-213ENST00000563842 ZSCAN5BA6NJL1 495 aa11.39□□□□□ -0.59
CLK3-213ENST00000563842 FAM183AA6NL82 134 aa11.39□□□□□ -0.59
CLK3-213ENST00000563842 CLDN25C9JDP6 229 aa11.39□□□□□ -0.59
CLK3-213ENST00000563842 ZNF878C9JN71 531 aa11.39□□□□□ -0.59
CLK3-213ENST00000563842 PRODHO43272 600 aa11.39□□□□□ -0.59
CLK3-213ENST00000563842 CDC14BO60729 498 aa11.39□□□□□ -0.59
CLK3-213ENST00000563842 RP2O75695 350 aa11.39□□□□□ -0.59
CLK3-213ENST00000563842 CLUP10909 449 aa11.39□□□□□ -0.59
CLK3-213ENST00000563842 TNFRSF1AP19438 455 aa11.39□□□□□ -0.59
CLK3-213ENST00000563842 GSTT1P30711 240 aa11.39□□□□□ -0.59
CLK3-213ENST00000563842 SLC6A9P48067 706 aa11.39□□□□□ -0.59
CLK3-213ENST00000563842 DAPP51397 102 aa11.39□□□□□ -0.59
CLK3-213ENST00000563842 TNFAIP6P98066 277 aaPredicted RBP11.39□□□□□ -0.59
CLK3-213ENST00000563842 DBPQ10586 325 aaPredicted RBP11.39□□□□□ -0.59
CLK3-213ENST00000563842 RSPO1Q2MKA7 263 aaPredicted RBP11.39□□□□□ -0.59
CLK3-213ENST00000563842 SLC35D3Q5M8T2 416 aa11.39□□□□□ -0.59
CLK3-213ENST00000563842 LINC01590Q5TEZ4 76 aa11.39□□□□□ -0.59
CLK3-213ENST00000563842 FAM166AQ6J272 317 aa11.39□□□□□ -0.59
CLK3-213ENST00000563842 DRAM2Q6UX65 266 aa11.39□□□□□ -0.59
CLK3-213ENST00000563842 RHOUQ7L0Q8 258 aa11.39□□□□□ -0.59
CLK3-213ENST00000563842 PEG10Q86TG7 708 aaKnown RBP11.39□□□□□ -0.59
CLK3-213ENST00000563842 ERI1Q8IV48 349 aaKnown RBP11.39□□□□□ -0.59
CLK3-213ENST00000563842 OR6N2Q8NGY6 317 aa11.39□□□□□ -0.59
CLK3-213ENST00000563842 SLAMF6Q96DU3 332 aa11.39□□□□□ -0.59
CLK3-213ENST00000563842 ZNF582Q96NG8 517 aaPredicted RBP11.39□□□□□ -0.59
CLK3-213ENST00000563842 COPS4Q9BT78 406 aa11.39□□□□□ -0.59
CLK3-213ENST00000563842 POFUT1Q9H488 388 aa11.39□□□□□ -0.59
CLK3-213ENST00000563842 TOR3AQ9H497 397 aa11.39□□□□□ -0.59
CLK3-213ENST00000563842 SP140LQ9H930 580 aa11.39□□□□□ -0.59
CLK3-213ENST00000563842 MSL2Q9HCI7 577 aa11.39□□□□□ -0.59
CLK3-213ENST00000563842 KRT84Q9NSB2 600 aa11.39□□□□□ -0.59
CLK3-213ENST00000563842 CENPMQ9NSP4 180 aa11.39□□□□□ -0.59
CLK3-213ENST00000563842 TMEM160Q9NX00 188 aa11.39□□□□□ -0.59
CLK3-213ENST00000563842 KCNS2Q9ULS6 477 aa11.39□□□□□ -0.59
CLK3-213ENST00000563842 WNK2Q9Y3S1 2297 aa11.38□□□□□ -0.59
CLK3-213ENST00000563842 LOC100289279A0A1B0GTE1 492 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms