RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 KCNE4Q8WWG9 221 aa8.68□□□□□ -1.02
SMG1-205ENST00000561947 ADAT3Q96EY9 351 aaPredicted RBP8.68□□□□□ -1.02
SMG1-205ENST00000561947 SRXN1Q9BYN0 137 aa8.68□□□□□ -1.02
SMG1-205ENST00000561947 NKIRAS2Q9NYR9 191 aa8.68□□□□□ -1.02
SMG1-205ENST00000561947 TAS2R8Q9NYW2 309 aa8.68□□□□□ -1.02
SMG1-205ENST00000561947 FOXJ2Q9P0K8 574 aa8.68□□□□□ -1.02
SMG1-205ENST00000561947 DOCK10Q96BY6 2186 aa8.68□□□□□ -1.02
SMG1-205ENST00000561947 A0A1W2PNU3 283 aaPredicted RBP8.67□□□□□ -1.02
SMG1-205ENST00000561947 LRRC3CA6NJW4 275 aa8.67□□□□□ -1.02
SMG1-205ENST00000561947 PRAF2O60831 178 aa8.67□□□□□ -1.02
SMG1-205ENST00000561947 WDPCPO95876 746 aa8.67□□□□□ -1.02
SMG1-205ENST00000561947 CSF1P09603 554 aa8.67□□□□□ -1.02
SMG1-205ENST00000561947 MSR1P21757 451 aa8.67□□□□□ -1.02
SMG1-205ENST00000561947 GNALP38405 381 aa8.67□□□□□ -1.02
SMG1-205ENST00000561947 CAPZA1P52907 286 aa8.67□□□□□ -1.02
SMG1-205ENST00000561947 ZNF121P58317 390 aaPredicted RBP8.67□□□□□ -1.02
SMG1-205ENST00000561947 GRB2P62993 217 aaKnown RBP8.67□□□□□ -1.02
SMG1-205ENST00000561947 GUCA2AQ02747 115 aa8.67□□□□□ -1.02
SMG1-205ENST00000561947 SGCAQ16586 387 aa8.67□□□□□ -1.02
SMG1-205ENST00000561947 PCGF3Q3KNV8 242 aa8.67□□□□□ -1.02
SMG1-205ENST00000561947 FAAP20Q6NZ36 180 aa8.67□□□□□ -1.02
SMG1-205ENST00000561947 ZNF813Q6ZN06 617 aa8.67□□□□□ -1.02
SMG1-205ENST00000561947 YRDCQ86U90 279 aaKnown RBP8.67□□□□□ -1.02
SMG1-205ENST00000561947 BEST3Q8N1M1 668 aa8.67□□□□□ -1.02
SMG1-205ENST00000561947 OR1M1Q8NGA1 313 aa8.67□□□□□ -1.02
SMG1-205ENST00000561947 OR8B12Q8NGG6 310 aa8.67□□□□□ -1.02
SMG1-205ENST00000561947 OR14L1PQ8NHC6 308 aa8.67□□□□□ -1.02
SMG1-205ENST00000561947 OR51E1Q8TCB6 317 aa8.67□□□□□ -1.02
SMG1-205ENST00000561947 ZFAND1Q8TCF1 268 aa8.67□□□□□ -1.02
SMG1-205ENST00000561947 PTX4Q96A99 478 aa8.67□□□□□ -1.02
SMG1-205ENST00000561947 SORCS2Q96PQ0 1159 aa8.67□□□□□ -1.02
SMG1-205ENST00000561947 ZNF416Q9BWM5 594 aa8.67□□□□□ -1.02
SMG1-205ENST00000561947 STMN3Q9NZ72 180 aa8.67□□□□□ -1.02
SMG1-205ENST00000561947 FLVCR2Q9UPI3 526 aa8.67□□□□□ -1.02
SMG1-205ENST00000561947 SMLR1H3BR10 107 aa8.67□□□□□ -1.02
SMG1-205ENST00000561947 ENPP1P22413 925 aa8.67□□□□□ -1.02
SMG1-205ENST00000561947 AVPR2P30518 371 aa8.67□□□□□ -1.02
SMG1-205ENST00000561947 PRSS3P35030 304 aa8.67□□□□□ -1.02
SMG1-205ENST00000561947 FAUP35544 74 aaKnown RBP8.67□□□□□ -1.02
SMG1-205ENST00000561947 CX3CR1P49238 355 aa8.67□□□□□ -1.02
SMG1-205ENST00000561947 VEGFCP49767 419 aa8.67□□□□□ -1.02
SMG1-205ENST00000561947 SUCLG1P53597 346 aaKnown RBP8.67□□□□□ -1.02
SMG1-205ENST00000561947 TNK1Q13470 666 aa8.67□□□□□ -1.02
SMG1-205ENST00000561947 LINC00303Q3SY05 128 aa8.67□□□□□ -1.02
SMG1-205ENST00000561947 ZNF529Q6P280 563 aa8.67□□□□□ -1.02
SMG1-205ENST00000561947 ASCC1Q8N9N2 400 aaKnown RBP8.67□□□□□ -1.02
SMG1-205ENST00000561947 OR4D6Q8NGJ1 314 aa8.67□□□□□ -1.02
SMG1-205ENST00000561947 PSMF1Q92530 271 aa8.67□□□□□ -1.02
SMG1-205ENST00000561947 PNPLA2Q96AD5 504 aa8.67□□□□□ -1.02
SMG1-205ENST00000561947 DACT3Q96B18 629 aaPredicted RBP8.67□□□□□ -1.02
SMG1-205ENST00000561947 CFAP54Q96N23 3096 aa8.67□□□□□ -1.02
SMG1-205ENST00000561947 TMEM246Q9BRR3 403 aa8.67□□□□□ -1.02
SMG1-205ENST00000561947 OR10A4Q9H209 315 aa8.67□□□□□ -1.02
SMG1-205ENST00000561947 NELFAQ9H3P2 528 aa8.67□□□□□ -1.02
SMG1-205ENST00000561947 NCOA6Q14686 2063 aaPredicted RBP8.67□□□□□ -1.02
SMG1-205ENST00000561947 CCDC187A0A096LP49 1063 aa8.67□□□□□ -1.02
SMG1-205ENST00000561947 A0A0A6YYH2 397 aa8.67□□□□□ -1.02
SMG1-205ENST00000561947 A6NJ64 397 aa8.67□□□□□ -1.02
SMG1-205ENST00000561947 ARPC1BO15143 372 aaKnown RBP8.67□□□□□ -1.02
SMG1-205ENST00000561947 SMAD9O15198 467 aaKnown RBP8.67□□□□□ -1.02
SMG1-205ENST00000561947 GSTT2P0CG29 244 aa8.67□□□□□ -1.02
SMG1-205ENST00000561947 SLC2A1P11166 492 aa8.67□□□□□ -1.02
SMG1-205ENST00000561947 RAB6AP20340 208 aa8.67□□□□□ -1.02
SMG1-205ENST00000561947 GUCA1AP43080 201 aaPredicted RBP8.67□□□□□ -1.02
SMG1-205ENST00000561947 CYB561P49447 251 aa8.67□□□□□ -1.02
SMG1-205ENST00000561947 RAC3P60763 192 aa8.67□□□□□ -1.02
SMG1-205ENST00000561947 SSBP1Q04837 148 aaKnown RBP8.67□□□□□ -1.02
SMG1-205ENST00000561947 ZIC4Q8N9L1 334 aa8.67□□□□□ -1.02
SMG1-205ENST00000561947 BEST4Q8NFU0 473 aa8.67□□□□□ -1.02
SMG1-205ENST00000561947 INTS12Q96CB8 462 aaKnown RBP8.67□□□□□ -1.02
SMG1-205ENST00000561947 SF3B5Q9BWJ5 86 aaKnown RBP8.67□□□□□ -1.02
SMG1-205ENST00000561947 CNTD2Q9H8S5 307 aa8.67□□□□□ -1.02
SMG1-205ENST00000561947 BEX1Q9HBH7 125 aa8.67□□□□□ -1.02
SMG1-205ENST00000561947 NOX3Q9HBY0 568 aa8.67□□□□□ -1.02
SMG1-205ENST00000561947 TMEM138Q9NPI0 162 aa8.67□□□□□ -1.02
SMG1-205ENST00000561947 DEPPQ9NTK1 212 aa8.67□□□□□ -1.02
SMG1-205ENST00000561947 FOXD3Q9UJU5 478 aaPredicted RBP8.67□□□□□ -1.02
SMG1-205ENST00000561947 ZNF222Q9UK12 451 aa8.67□□□□□ -1.02
SMG1-205ENST00000561947 R4GN57 208 aa8.67□□□□□ -1.02
SMG1-205ENST00000561947 A0A1B0GUH1 482 aa8.66□□□□□ -1.02
SMG1-205ENST00000561947 SULT1C2O00338 296 aa8.66□□□□□ -1.02
SMG1-205ENST00000561947 DHHO43323 396 aa8.66□□□□□ -1.02
SMG1-205ENST00000561947 NDUFB6O95139 128 aa8.66□□□□□ -1.02
SMG1-205ENST00000561947 TGM6O95932 706 aa8.66□□□□□ -1.02
SMG1-205ENST00000561947 MT-CO3P00414 261 aa8.66□□□□□ -1.02
SMG1-205ENST00000561947 RFPL3SP0C7P2 107 aa8.66□□□□□ -1.02
SMG1-205ENST00000561947 SULT1A3P0DMM9 295 aa8.66□□□□□ -1.02
SMG1-205ENST00000561947 SULT1A4P0DMN0 295 aa8.66□□□□□ -1.02
SMG1-205ENST00000561947 ANXA3P12429 323 aa8.66□□□□□ -1.02
SMG1-205ENST00000561947 ZNF20P17024 532 aa8.66□□□□□ -1.02
SMG1-205ENST00000561947 RAB3AP20336 220 aa8.66□□□□□ -1.02
SMG1-205ENST00000561947 CCL1P22362 96 aa8.66□□□□□ -1.02
SMG1-205ENST00000561947 DLSTP36957 453 aa8.66□□□□□ -1.02
SMG1-205ENST00000561947 SELENOPP49908 381 aa8.66□□□□□ -1.02
SMG1-205ENST00000561947 ENDOGQ14249 297 aaKnown RBP8.66□□□□□ -1.02
SMG1-205ENST00000561947 TMEM164Q5U3C3 297 aa8.66□□□□□ -1.02
SMG1-205ENST00000561947 ZNF627Q7L945 461 aa8.66□□□□□ -1.02
SMG1-205ENST00000561947 ABHD12BQ7Z5M8 362 aaPredicted RBP8.66□□□□□ -1.02
SMG1-205ENST00000561947 GGNQ86UU5 652 aa8.66□□□□□ -1.02
SMG1-205ENST00000561947 SLC22A24Q8N4F4 322 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms