RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 CYB5R1Q9UHQ9 305 aa8.68□□□□□ -1.02
CLK3-205ENST00000561673 PPP1R3CQ9UQK1 317 aa8.68□□□□□ -1.02
CLK3-205ENST00000561673 LYVE1Q9Y5Y7 322 aa8.68□□□□□ -1.02
CLK3-205ENST00000561673 TCRBV5S2A0A599 114 aa8.67□□□□□ -1.02
CLK3-205ENST00000561673 J3QLI3 93 aa8.67□□□□□ -1.02
CLK3-205ENST00000561673 TNFRSF11BO00300 401 aa8.67□□□□□ -1.02
CLK3-205ENST00000561673 SURF4O15260 269 aa8.67□□□□□ -1.02
CLK3-205ENST00000561673 GASTP01350 101 aa8.67□□□□□ -1.02
CLK3-205ENST00000561673 HLA-DQA2P01906 255 aa8.67□□□□□ -1.02
CLK3-205ENST00000561673 ADRA2CP18825 462 aa8.67□□□□□ -1.02
CLK3-205ENST00000561673 ATP6V1B2P21281 511 aa8.67□□□□□ -1.02
CLK3-205ENST00000561673 GGT2P36268 569 aa8.67□□□□□ -1.02
CLK3-205ENST00000561673 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.67□□□□□ -1.02
CLK3-205ENST00000561673 SLC36A3Q495N2 470 aa8.67□□□□□ -1.02
CLK3-205ENST00000561673 ZNF770Q6IQ21 691 aaPredicted RBP8.67□□□□□ -1.02
CLK3-205ENST00000561673 COLCA1Q6ZS62 124 aa8.67□□□□□ -1.02
CLK3-205ENST00000561673 NAA40Q86UY6 237 aa8.67□□□□□ -1.02
CLK3-205ENST00000561673 LRRC28Q86X40 367 aaPredicted RBP8.67□□□□□ -1.02
CLK3-205ENST00000561673 OR8G5Q8NG78 346 aa8.67□□□□□ -1.02
CLK3-205ENST00000561673 OR4C15Q8NGM1 316 aa8.67□□□□□ -1.02
CLK3-205ENST00000561673 OR13G1Q8NGZ3 307 aa8.67□□□□□ -1.02
CLK3-205ENST00000561673 NSL1Q96IY1 281 aa8.67□□□□□ -1.02
CLK3-205ENST00000561673 ZNF582Q96NG8 517 aaPredicted RBP8.67□□□□□ -1.02
CLK3-205ENST00000561673 SIGLEC11Q96RL6 698 aa8.67□□□□□ -1.02
CLK3-205ENST00000561673 DDOQ99489 341 aa8.67□□□□□ -1.02
CLK3-205ENST00000561673 PITX2Q99697 317 aa8.67□□□□□ -1.02
CLK3-205ENST00000561673 C1QTNF5Q9BXJ0 243 aa8.67□□□□□ -1.02
CLK3-205ENST00000561673 PLA2G12AQ9BZM1 189 aa8.67□□□□□ -1.02
CLK3-205ENST00000561673 TRIM15Q9C019 465 aa8.67□□□□□ -1.02
CLK3-205ENST00000561673 WDR76Q9H967 626 aa8.67□□□□□ -1.02
CLK3-205ENST00000561673 GCM1Q9NP62 436 aa8.67□□□□□ -1.02
CLK3-205ENST00000561673 PNRC2Q9NPJ4 139 aaKnown RBP8.67□□□□□ -1.02
CLK3-205ENST00000561673 MRPL22Q9NWU5 206 aaKnown RBP8.67□□□□□ -1.02
CLK3-205ENST00000561673 OPN4Q9UHM6 478 aa8.67□□□□□ -1.02
CLK3-205ENST00000561673 PCDHB10Q9UN67 800 aa8.67□□□□□ -1.02
CLK3-205ENST00000561673 A0A0A6YYJ9 748 aa8.66□□□□□ -1.02
CLK3-205ENST00000561673 F5H5K5 113 aa8.66□□□□□ -1.02
CLK3-205ENST00000561673 H0YL77 283 aa8.66□□□□□ -1.02
CLK3-205ENST00000561673 TMEM178BH3BS89 294 aa8.66□□□□□ -1.02
CLK3-205ENST00000561673 BHLHE40O14503 412 aa8.66□□□□□ -1.02
CLK3-205ENST00000561673 RGS9O75916 674 aaPredicted RBP8.66□□□□□ -1.02
CLK3-205ENST00000561673 ACSM4P0C7M7 580 aa8.66□□□□□ -1.02
CLK3-205ENST00000561673 GATA3P23771 443 aa8.66□□□□□ -1.02
CLK3-205ENST00000561673 PYCR1P32322 319 aa8.66□□□□□ -1.02
CLK3-205ENST00000561673 MAGEA2P43356 314 aa8.66□□□□□ -1.02
CLK3-205ENST00000561673 BTG1P62324 171 aa8.66□□□□□ -1.02
CLK3-205ENST00000561673 MS4A2Q01362 244 aa8.66□□□□□ -1.02
CLK3-205ENST00000561673 TRAP1Q12931 704 aaKnown RBP8.66□□□□□ -1.02
CLK3-205ENST00000561673 PPP1R8Q12972 351 aaKnown RBP8.66□□□□□ -1.02
CLK3-205ENST00000561673 ECH1Q13011 328 aa8.66□□□□□ -1.02
CLK3-205ENST00000561673 SCGB2A2Q13296 93 aa8.66□□□□□ -1.02
CLK3-205ENST00000561673 ZMYND11Q15326 602 aa8.66□□□□□ -1.02
CLK3-205ENST00000561673 ZNF362Q5T0B9 420 aaPredicted RBP8.66□□□□□ -1.02
CLK3-205ENST00000561673 SLC27A4Q6P1M0 643 aa8.66□□□□□ -1.02
CLK3-205ENST00000561673 C1QL2Q7Z5L3 287 aa8.66□□□□□ -1.02
CLK3-205ENST00000561673 KLHL36Q8N4N3 616 aa8.66□□□□□ -1.02
CLK3-205ENST00000561673 LINC00471Q8N535 108 aa8.66□□□□□ -1.02
CLK3-205ENST00000561673 TEX29Q8N6K0 151 aa8.66□□□□□ -1.02
CLK3-205ENST00000561673 ZNF511Q8NB15 262 aa8.66□□□□□ -1.02
CLK3-205ENST00000561673 CYB561A3Q8NBI2 242 aa8.66□□□□□ -1.02
CLK3-205ENST00000561673 BHLHE23Q8NDY6 225 aa8.66□□□□□ -1.02
CLK3-205ENST00000561673 SEMA6DQ8NFY4 1073 aa8.66□□□□□ -1.02
CLK3-205ENST00000561673 OR10AD1Q8NGE0 317 aa8.66□□□□□ -1.02
CLK3-205ENST00000561673 OR2AJ1Q8NGZ0 328 aa8.66□□□□□ -1.02
CLK3-205ENST00000561673 ST7LQ8TDW4 575 aa8.66□□□□□ -1.02
CLK3-205ENST00000561673 ZNRF4Q8WWF5 429 aa8.66□□□□□ -1.02
CLK3-205ENST00000561673 MAP6Q96JE9 813 aa8.66□□□□□ -1.02
CLK3-205ENST00000561673 MEGF10Q96KG7 1140 aa8.66□□□□□ -1.02
CLK3-205ENST00000561673 ATF6BQ99941 703 aa8.66□□□□□ -1.02
CLK3-205ENST00000561673 SLC30A2Q9BRI3 323 aa8.66□□□□□ -1.02
CLK3-205ENST00000561673 C7orf69Q9H7B7 122 aa8.66□□□□□ -1.02
CLK3-205ENST00000561673 IL20Q9NYY1 176 aa8.66□□□□□ -1.02
CLK3-205ENST00000561673 CDH10Q9Y6N8 788 aa8.66□□□□□ -1.02
CLK3-205ENST00000561673 TENM1Q9UKZ4 2725 aa8.65□□□□□ -1.02
CLK3-205ENST00000561673 IGHV3-64DA0A0J9YX35 117 aa8.65□□□□□ -1.02
CLK3-205ENST00000561673 A0A1B0GWJ7 208 aa8.65□□□□□ -1.02
CLK3-205ENST00000561673 IQCF6A8MYZ5 107 aa8.65□□□□□ -1.02
CLK3-205ENST00000561673 F5H5P2 479 aa8.65□□□□□ -1.02
CLK3-205ENST00000561673 TRAPPC2LH3BP13 241 aa8.65□□□□□ -1.02
CLK3-205ENST00000561673 MLNRO43193 412 aa8.65□□□□□ -1.02
CLK3-205ENST00000561673 FOXH1O75593 365 aa8.65□□□□□ -1.02
CLK3-205ENST00000561673 CCNB2O95067 398 aa8.65□□□□□ -1.02
CLK3-205ENST00000561673 LCATP04180 440 aa8.65□□□□□ -1.02
CLK3-205ENST00000561673 T-ENOLP0DO92 83 aa8.65□□□□□ -1.02
CLK3-205ENST00000561673 ZNF823P16415 610 aa8.65□□□□□ -1.02
CLK3-205ENST00000561673 EPHA1P21709 976 aa8.65□□□□□ -1.02
CLK3-205ENST00000561673 RPS27P42677 84 aaKnown RBP8.65□□□□□ -1.02
CLK3-205ENST00000561673 SLC6A9P48067 706 aa8.65□□□□□ -1.02
CLK3-205ENST00000561673 SEC61A1P61619 476 aaKnown RBP8.65□□□□□ -1.02
CLK3-205ENST00000561673 TRIM25Q14258 630 aaKnown RBP8.65□□□□□ -1.02
CLK3-205ENST00000561673 GK2Q14410 553 aaPredicted RBP8.65□□□□□ -1.02
CLK3-205ENST00000561673 TMEM155Q4W5P6 130 aa8.65□□□□□ -1.02
CLK3-205ENST00000561673 RPL13AP3Q6NVV1 102 aa8.65□□□□□ -1.02
CLK3-205ENST00000561673 RASSF6Q6ZTQ3 369 aa8.65□□□□□ -1.02
CLK3-205ENST00000561673 USP43Q70EL4 1123 aa8.65□□□□□ -1.02
CLK3-205ENST00000561673 DHFR2Q86XF0 187 aa8.65□□□□□ -1.02
CLK3-205ENST00000561673 ARHGAP24Q8N264 748 aa8.65□□□□□ -1.02
CLK3-205ENST00000561673 SPICQ8N5J4 248 aa8.65□□□□□ -1.02
CLK3-205ENST00000561673 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.65□□□□□ -1.02
CLK3-205ENST00000561673 AQP11Q8NBQ7 271 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms