RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 BHLHE40O14503 412 aa21.31■■□□□ 1
NME3-202ENST00000561637 ADRA2CP18825 462 aa21.31■■□□□ 1
NME3-202ENST00000561637 PCMT1P22061 227 aa21.31■■□□□ 1
NME3-202ENST00000561637 IFNGR2P38484 337 aa21.31■■□□□ 1
NME3-202ENST00000561637 HMGA2P52926 109 aa21.31■■□□□ 1
NME3-202ENST00000561637 LCN2P80188 198 aa21.31■■□□□ 1
NME3-202ENST00000561637 OR51L1Q8NGJ5 315 aa21.31■■□□□ 1
NME3-202ENST00000561637 RAB39BQ96DA2 213 aa21.31■■□□□ 1
NME3-202ENST00000561637 OR2V2Q96R30 315 aa21.31■■□□□ 1
NME3-202ENST00000561637 SIGLEC11Q96RL6 698 aa21.31■■□□□ 1
NME3-202ENST00000561637 DIRC2Q96SL1 478 aa21.31■■□□□ 1
NME3-202ENST00000561637 HDHD2Q9H0R4 259 aa21.31■■□□□ 1
NME3-202ENST00000561637 ATPIF1Q9UII2 106 aa21.31■■□□□ 1
NME3-202ENST00000561637 NPTNQ9Y639 398 aa21.31■■□□□ 1
NME3-202ENST00000561637 C5orf63A6NC05 138 aa21.3■■□□□ 1
NME3-202ENST00000561637 PNPP00491 289 aa21.3■■□□□ 1
NME3-202ENST00000561637 SBK2P0C263 348 aa21.3■■□□□ 1
NME3-202ENST00000561637 RAC2P15153 192 aa21.3■■□□□ 1
NME3-202ENST00000561637 ZFP36P26651 326 aaKnown RBP21.3■■□□□ 1
NME3-202ENST00000561637 SPATS1Q496A3 300 aa21.3■■□□□ 1
NME3-202ENST00000561637 ZNF362Q5T0B9 420 aaPredicted RBP21.3■■□□□ 1
NME3-202ENST00000561637 LCN8Q6JVE9 175 aa21.3■■□□□ 1
NME3-202ENST00000561637 FBXW12Q6X9E4 464 aa21.3■■□□□ 1
NME3-202ENST00000561637 BHLHE23Q8NDY6 225 aa21.3■■□□□ 1
NME3-202ENST00000561637 OR10S1Q8NGN2 331 aa21.3■■□□□ 1
NME3-202ENST00000561637 OR9Q1Q8NGQ5 310 aa21.3■■□□□ 1
NME3-202ENST00000561637 OR4Q3Q8NH05 313 aa21.3■■□□□ 1
NME3-202ENST00000561637 GCDHQ92947 438 aaPredicted RBP21.3■■□□□ 1
NME3-202ENST00000561637 MAP6Q96JE9 813 aa21.3■■□□□ 1
NME3-202ENST00000561637 CYB5R1Q9UHQ9 305 aa21.3■■□□□ 1
NME3-202ENST00000561637 U3KQV3 271 aa21.3■■□□□ 1
NME3-202ENST00000561637 F5H5K5 113 aa21.29■■□□□ 1
NME3-202ENST00000561637 SOX14O95416 240 aa21.29■■□□□ 1
NME3-202ENST00000561637 HLA-DQA2P01906 255 aa21.29■■□□□ 1
NME3-202ENST00000561637 ACSM4P0C7M7 580 aa21.29■■□□□ 1
NME3-202ENST00000561637 SELEP16581 610 aa21.29■■□□□ 1
NME3-202ENST00000561637 SEC61A1P61619 476 aaKnown RBP21.29■■□□□ 1
NME3-202ENST00000561637 ZMYND11Q15326 602 aa21.29■■□□□ 1
NME3-202ENST00000561637 PGM2L1Q6PCE3 622 aa21.29■■□□□ 1
NME3-202ENST00000561637 SHQ1Q6PI26 577 aaKnown RBP21.29■■□□□ 1
NME3-202ENST00000561637 ZNF283Q8N7M2 679 aa21.29■■□□□ 1
NME3-202ENST00000561637 AQP11Q8NBQ7 271 aa21.29■■□□□ 1
NME3-202ENST00000561637 APOBEC3DQ96AK3 386 aaPredicted RBP21.29■■□□□ 1
NME3-202ENST00000561637 PITX2Q99697 317 aa21.29■■□□□ 1
NME3-202ENST00000561637 MLNRO43193 412 aa21.28■■□□□ 1
NME3-202ENST00000561637 IDH3BO43837 385 aa21.28■■□□□ 1
NME3-202ENST00000561637 KRT36O76013 467 aa21.28■■□□□ 1
NME3-202ENST00000561637 CCNB2O95067 398 aa21.28■■□□□ 1
NME3-202ENST00000561637 ZNF205O95201 554 aa21.28■■□□□ 1
NME3-202ENST00000561637 TUBG1P23258 451 aa21.28■■□□□ 1
NME3-202ENST00000561637 RGS6P49758 472 aa21.28■■□□□ 1
NME3-202ENST00000561637 COLCA1Q6ZS62 124 aa21.28■■□□□ 1
NME3-202ENST00000561637 DHFR2Q86XF0 187 aa21.28■■□□□ 1
NME3-202ENST00000561637 ATG16L2Q8NAA4 619 aa21.28■■□□□ 1
NME3-202ENST00000561637 SLC37A3Q8NCC5 494 aa21.28■■□□□ 1
NME3-202ENST00000561637 ZNF420Q8TAQ5 688 aaPredicted RBP21.28■■□□□ 1
NME3-202ENST00000561637 CCDC124Q96CT7 223 aaKnown RBP21.28■■□□□ 1
NME3-202ENST00000561637 TRIM15Q9C019 465 aa21.28■■□□□ 1
NME3-202ENST00000561637 TUBG2Q9NRH3 451 aa21.28■■□□□ 1
NME3-202ENST00000561637 ARMC1Q9NVT9 282 aa21.28■■□□□ 1
NME3-202ENST00000561637 GYPBP06028 91 aa21.27■■□□□ 1
NME3-202ENST00000561637 TNFSF4P23510 183 aa21.27■■□□□ 1
NME3-202ENST00000561637 MMP16P51512 607 aa21.27■■□□□ 1
NME3-202ENST00000561637 MNAT1P51948 309 aa21.27■■□□□ 1
NME3-202ENST00000561637 SLC3A1Q07837 685 aa21.27■■□□□ 1
NME3-202ENST00000561637 TRAP1Q12931 704 aaKnown RBP21.27■■□□□ 1
NME3-202ENST00000561637 RASSF6Q6ZTQ3 369 aa21.27■■□□□ 1
NME3-202ENST00000561637 CCDC197Q8NCU1 140 aa21.27■■□□□ 1
NME3-202ENST00000561637 PROKR2Q8NFJ6 384 aa21.27■■□□□ 1
NME3-202ENST00000561637 OR8G5Q8NG78 346 aa21.27■■□□□ 1
NME3-202ENST00000561637 OR52L1Q8NGH7 329 aa21.27■■□□□ 1
NME3-202ENST00000561637 ATF6BQ99941 703 aa21.27■■□□□ 1
NME3-202ENST00000561637 C1QTNF5Q9BXJ0 243 aa21.27■■□□□ 1
NME3-202ENST00000561637 TBC1D23Q9NUY8 699 aa21.27■■□□□ 1
NME3-202ENST00000561637 OPN4Q9UHM6 478 aa21.27■■□□□ 1
NME3-202ENST00000561637 PPP1R3CQ9UQK1 317 aa21.27■■□□□ 1
NME3-202ENST00000561637 TRRAPQ9Y4A5 3859 aa21.27■□□□□ 0.99
NME3-202ENST00000561637 F5H5P2 479 aa21.26■□□□□ 0.99
NME3-202ENST00000561637 FAM107AO95990 144 aa21.26■□□□□ 0.99
NME3-202ENST00000561637 TRIM25Q14258 630 aaKnown RBP21.26■□□□□ 0.99
NME3-202ENST00000561637 SLC36A3Q495N2 470 aa21.26■□□□□ 0.99
NME3-202ENST00000561637 OR2AJ1Q8NGZ0 328 aa21.26■□□□□ 0.99
NME3-202ENST00000561637 FAM216AQ8WUB2 273 aa21.26■□□□□ 0.99
NME3-202ENST00000561637 MEGF10Q96KG7 1140 aa21.26■□□□□ 0.99
NME3-202ENST00000561637 COG8Q96MW5 612 aa21.26■□□□□ 0.99
NME3-202ENST00000561637 CDADC1Q9BWV3 514 aa21.26■□□□□ 0.99
NME3-202ENST00000561637 TSSK6Q9BXA6 273 aa21.26■□□□□ 0.99
NME3-202ENST00000561637 GCM1Q9NP62 436 aa21.26■□□□□ 0.99
NME3-202ENST00000561637 IL20Q9NYY1 176 aa21.26■□□□□ 0.99
NME3-202ENST00000561637 IL19Q9UHD0 177 aa21.26■□□□□ 0.99
NME3-202ENST00000561637 SAMHD1Q9Y3Z3 626 aaKnown RBP21.26■□□□□ 0.99
NME3-202ENST00000561637 A0A0G2JMP0 313 aa21.25■□□□□ 0.99
NME3-202ENST00000561637 A0A0X1KG70 313 aa21.25■□□□□ 0.99
NME3-202ENST00000561637 J3QW42 95 aa21.25■□□□□ 0.99
NME3-202ENST00000561637 HLA-DPB1P04440 258 aa21.25■□□□□ 0.99
NME3-202ENST00000561637 CLUP10909 449 aa21.25■□□□□ 0.99
NME3-202ENST00000561637 ANPEPP15144 967 aa21.25■□□□□ 0.99
NME3-202ENST00000561637 BTG1P62324 171 aa21.25■□□□□ 0.99
NME3-202ENST00000561637 HOXA4Q00056 320 aaPredicted RBP21.25■□□□□ 0.99
NME3-202ENST00000561637 CRMP1Q14194 572 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms