RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 DOCK10Q96BY6 2186 aa12.23□□□□□ -0.45
TRAF3-208ENST00000560371 F6UZH7 168 aa12.23□□□□□ -0.45
TRAF3-208ENST00000560371 CTXN2P0C2S0 81 aa12.23□□□□□ -0.45
TRAF3-208ENST00000560371 COMMD7Q86VX2 200 aa12.23□□□□□ -0.45
TRAF3-208ENST00000560371 FAM185AQ8N0U4 392 aa12.23□□□□□ -0.45
TRAF3-208ENST00000560371 SUMF1Q8NBK3 374 aa12.23□□□□□ -0.45
TRAF3-208ENST00000560371 TP53I13Q8NBR0 393 aaPredicted RBP12.23□□□□□ -0.45
TRAF3-208ENST00000560371 CD300AQ9UGN4 299 aa12.23□□□□□ -0.45
TRAF3-208ENST00000560371 DVL1O14640 695 aa12.22□□□□□ -0.45
TRAF3-208ENST00000560371 XRCC2O43543 280 aa12.22□□□□□ -0.45
TRAF3-208ENST00000560371 TNFSF14O43557 240 aa12.22□□□□□ -0.45
TRAF3-208ENST00000560371 YIF1AO95070 293 aa12.22□□□□□ -0.45
TRAF3-208ENST00000560371 DVL1P1P54792 670 aaPredicted RBP12.22□□□□□ -0.45
TRAF3-208ENST00000560371 RAC1P63000 192 aa12.22□□□□□ -0.45
TRAF3-208ENST00000560371 LAIR1Q6GTX8 287 aa12.22□□□□□ -0.45
TRAF3-208ENST00000560371 LHFPL2Q6ZUX7 228 aa12.22□□□□□ -0.45
TRAF3-208ENST00000560371 OR2A14Q96R47 310 aa12.22□□□□□ -0.45
TRAF3-208ENST00000560371 SPI1P17947 270 aa12.22□□□□□ -0.45
TRAF3-208ENST00000560371 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.22□□□□□ -0.45
TRAF3-208ENST00000560371 FBXL4Q9UKA2 621 aa12.22□□□□□ -0.45
TRAF3-208ENST00000560371 ZNF705GA8MUZ8 300 aaPredicted RBP12.22□□□□□ -0.45
TRAF3-208ENST00000560371 ACOT8O14734 319 aa12.22□□□□□ -0.45
TRAF3-208ENST00000560371 SOD1P00441 154 aa12.22□□□□□ -0.45
TRAF3-208ENST00000560371 EGR3Q06889 387 aa12.22□□□□□ -0.45
TRAF3-208ENST00000560371 TMEM217Q8N7C4 229 aa12.22□□□□□ -0.45
TRAF3-208ENST00000560371 ARSGQ96EG1 525 aa12.22□□□□□ -0.45
TRAF3-208ENST00000560371 ANKRD61A6NGH8 418 aa12.22□□□□□ -0.45
TRAF3-208ENST00000560371 C1orf196B1AJZ1 125 aa12.22□□□□□ -0.45
TRAF3-208ENST00000560371 METTL17Q9H7H0 456 aaPredicted RBP12.22□□□□□ -0.45
TRAF3-208ENST00000560371 SMCO4Q9NRQ5 59 aa12.22□□□□□ -0.45
TRAF3-208ENST00000560371 PDCD11Q14690 1871 aaKnown RBP12.22□□□□□ -0.45
TRAF3-208ENST00000560371 CNRIP1Q96F85 164 aaPredicted RBP12.22□□□□□ -0.45
TRAF3-208ENST00000560371 GNRHR2Q96P88 292 aa12.22□□□□□ -0.45
TRAF3-208ENST00000560371 UHRF2Q96PU4 802 aa12.22□□□□□ -0.45
TRAF3-208ENST00000560371 ACOXLQ9NUZ1 547 aa12.22□□□□□ -0.45
TRAF3-208ENST00000560371 TAS2R4Q9NYW5 299 aa12.22□□□□□ -0.45
TRAF3-208ENST00000560371 KIF13BQ9NQT8 1826 aa12.22□□□□□ -0.45
TRAF3-208ENST00000560371 B4GALT1P15291 398 aa12.21□□□□□ -0.45
TRAF3-208ENST00000560371 CHATP28329 748 aa12.21□□□□□ -0.45
TRAF3-208ENST00000560371 SHBQ15464 509 aa12.21□□□□□ -0.45
TRAF3-208ENST00000560371 RTL8BQ17RB0 113 aa12.21□□□□□ -0.45
TRAF3-208ENST00000560371 HES3Q5TGS1 186 aa12.21□□□□□ -0.45
TRAF3-208ENST00000560371 SLCO4A1Q96BD0 722 aa12.21□□□□□ -0.45
TRAF3-208ENST00000560371 S1PR3Q99500 378 aa12.21□□□□□ -0.45
TRAF3-208ENST00000560371 HCCSP53701 268 aa12.21□□□□□ -0.45
TRAF3-208ENST00000560371 SUMO3P55854 103 aaPredicted RBP12.21□□□□□ -0.45
TRAF3-208ENST00000560371 NKX6-1P78426 367 aaPredicted RBP12.21□□□□□ -0.45
TRAF3-208ENST00000560371 RGS7BPQ6MZT1 257 aaPredicted RBP12.21□□□□□ -0.45
TRAF3-208ENST00000560371 PLXDC2Q6UX71 529 aa12.21□□□□□ -0.45
TRAF3-208ENST00000560371 TMEM102Q8N9M5 508 aaPredicted RBP12.21□□□□□ -0.45
TRAF3-208ENST00000560371 OR51H1Q8NH63 302 aa12.21□□□□□ -0.45
TRAF3-208ENST00000560371 ALKBH3Q96Q83 286 aaPredicted RBP12.21□□□□□ -0.45
TRAF3-208ENST00000560371 HINT3Q9NQE9 182 aaKnown RBP12.21□□□□□ -0.45
TRAF3-208ENST00000560371 CEPT1Q9Y6K0 416 aa12.21□□□□□ -0.45
TRAF3-208ENST00000560371 SLCO1B1Q9Y6L6 691 aa12.21□□□□□ -0.45
TRAF3-208ENST00000560371 ADH4P08319 380 aa12.21□□□□□ -0.45
TRAF3-208ENST00000560371 FOLR1P15328 257 aa12.21□□□□□ -0.45
TRAF3-208ENST00000560371 DVL3Q92997 716 aaPredicted RBP12.21□□□□□ -0.45
TRAF3-208ENST00000560371 CNTNAP3Q9BZ76 1288 aa12.21□□□□□ -0.45
TRAF3-208ENST00000560371 SAV1Q9H4B6 383 aaPredicted RBP12.21□□□□□ -0.45
TRAF3-208ENST00000560371 BCL2L10Q9HD36 194 aa12.21□□□□□ -0.45
TRAF3-208ENST00000560371 GPR12P47775 334 aa12.21□□□□□ -0.45
TRAF3-208ENST00000560371 NPY4RP50391 375 aa12.21□□□□□ -0.45
TRAF3-208ENST00000560371 TLE4Q04727 773 aa12.21□□□□□ -0.45
TRAF3-208ENST00000560371 DOC2BQ14184 412 aa12.21□□□□□ -0.45
TRAF3-208ENST00000560371 MDGA2Q7Z553 956 aa12.21□□□□□ -0.45
TRAF3-208ENST00000560371 OR10G3Q8NGC4 313 aa12.21□□□□□ -0.45
TRAF3-208ENST00000560371 PSD2Q9BQI7 771 aa12.21□□□□□ -0.45
TRAF3-208ENST00000560371 VN1R1Q9GZP7 353 aa12.21□□□□□ -0.45
TRAF3-208ENST00000560371 SLA2Q9H6Q3 261 aa12.21□□□□□ -0.45
TRAF3-208ENST00000560371 SLC23A1Q9UHI7 598 aa12.21□□□□□ -0.45
TRAF3-208ENST00000560371 A0A0D9SG52 128 aa12.21□□□□□ -0.46
TRAF3-208ENST00000560371 KLK8O60259 260 aa12.21□□□□□ -0.46
TRAF3-208ENST00000560371 FABP1P07148 127 aa12.21□□□□□ -0.46
TRAF3-208ENST00000560371 CHRNB1P11230 501 aa12.21□□□□□ -0.46
TRAF3-208ENST00000560371 RFPL4BQ6ZWI9 263 aa12.21□□□□□ -0.46
TRAF3-208ENST00000560371 FBXL14Q8N1E6 418 aa12.21□□□□□ -0.46
TRAF3-208ENST00000560371 M0QYG6 137 aa12.21□□□□□ -0.46
TRAF3-208ENST00000560371 ACSM5Q6NUN0 579 aa12.21□□□□□ -0.46
TRAF3-208ENST00000560371 ZDHHC23Q8IYP9 409 aa12.21□□□□□ -0.46
TRAF3-208ENST00000560371 OR2I1PQ8NGU4 316 aa12.21□□□□□ -0.46
TRAF3-208ENST00000560371 DPF1Q92782 380 aa12.21□□□□□ -0.46
TRAF3-208ENST00000560371 IGHV1OR21-1A0A087WYE8 117 aa12.2□□□□□ -0.46
TRAF3-208ENST00000560371 CHEK1O14757 476 aa12.2□□□□□ -0.46
TRAF3-208ENST00000560371 NXPH3O95157 252 aa12.2□□□□□ -0.46
TRAF3-208ENST00000560371 HBE1P02100 147 aa12.2□□□□□ -0.46
TRAF3-208ENST00000560371 EMDP50402 254 aa12.2□□□□□ -0.46
TRAF3-208ENST00000560371 SORDQ00796 357 aa12.2□□□□□ -0.46
TRAF3-208ENST00000560371 OR8G2PQ6IF36 304 aa12.2□□□□□ -0.46
TRAF3-208ENST00000560371 SMAP2Q8WU79 429 aaPredicted RBP12.2□□□□□ -0.46
TRAF3-208ENST00000560371 ZDHHC16Q969W1 377 aa12.2□□□□□ -0.46
TRAF3-208ENST00000560371 SEH1LQ96EE3 360 aa12.2□□□□□ -0.46
TRAF3-208ENST00000560371 B4GALNT1Q00973 533 aa12.2□□□□□ -0.46
TRAF3-208ENST00000560371 PCK2Q16822 640 aa12.2□□□□□ -0.46
TRAF3-208ENST00000560371 RDH5Q92781 318 aa12.2□□□□□ -0.46
TRAF3-208ENST00000560371 NUDT9Q9BW91 350 aa12.2□□□□□ -0.46
TRAF3-208ENST00000560371 ISYNA1Q9NPH2 558 aa12.2□□□□□ -0.46
TRAF3-208ENST00000560371 ZC3H12DA2A288 527 aaKnown RBP12.2□□□□□ -0.46
TRAF3-208ENST00000560371 CISD3P0C7P0 127 aa12.2□□□□□ -0.46
TRAF3-208ENST00000560371 PRPH2P23942 346 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms