RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 COLCA1Q6ZS62 124 aa9.88□□□□□ -0.83
RABGGTA-216ENST00000560243 OR5AS1Q8N127 324 aa9.88□□□□□ -0.83
RABGGTA-216ENST00000560243 PAPD5Q8NDF8 572 aaKnown RBP9.88□□□□□ -0.83
RABGGTA-216ENST00000560243 OR2AJ1Q8NGZ0 328 aa9.88□□□□□ -0.83
RABGGTA-216ENST00000560243 HPS1Q92902 700 aa9.88□□□□□ -0.83
RABGGTA-216ENST00000560243 DCLRE1CQ96SD1 692 aaKnown RBP9.88□□□□□ -0.83
RABGGTA-216ENST00000560243 CDADC1Q9BWV3 514 aa9.88□□□□□ -0.83
RABGGTA-216ENST00000560243 NTN4Q9HB63 628 aa9.88□□□□□ -0.83
RABGGTA-216ENST00000560243 DNAJB9Q9UBS3 223 aa9.88□□□□□ -0.83
RABGGTA-216ENST00000560243 BAIAP2Q9UQB8 552 aa9.88□□□□□ -0.83
RABGGTA-216ENST00000560243 COMMD3-BMI1R4GMX3 469 aa9.88□□□□□ -0.83
RABGGTA-216ENST00000560243 WNK2Q9Y3S1 2297 aa9.87□□□□□ -0.83
RABGGTA-216ENST00000560243 RIIAD1A6NNX1 92 aa9.87□□□□□ -0.83
RABGGTA-216ENST00000560243 H3BN98 237 aa9.87□□□□□ -0.83
RABGGTA-216ENST00000560243 E2F6O75461 281 aa9.87□□□□□ -0.83
RABGGTA-216ENST00000560243 TIPRLO75663 272 aa9.87□□□□□ -0.83
RABGGTA-216ENST00000560243 RAC2P15153 192 aa9.87□□□□□ -0.83
RABGGTA-216ENST00000560243 ZNF823P16415 610 aa9.87□□□□□ -0.83
RABGGTA-216ENST00000560243 TUBG1P23258 451 aa9.87□□□□□ -0.83
RABGGTA-216ENST00000560243 POU1F1P28069 291 aa9.87□□□□□ -0.83
RABGGTA-216ENST00000560243 SLC25A1P53007 311 aa9.87□□□□□ -0.83
RABGGTA-216ENST00000560243 CDH15P55291 814 aa9.87□□□□□ -0.83
RABGGTA-216ENST00000560243 TNFAIP6P98066 277 aaPredicted RBP9.87□□□□□ -0.83
RABGGTA-216ENST00000560243 GK3PQ14409 553 aa9.87□□□□□ -0.83
RABGGTA-216ENST00000560243 FAM120AOSQ5T036 256 aa9.87□□□□□ -0.83
RABGGTA-216ENST00000560243 LINC01590Q5TEZ4 76 aa9.87□□□□□ -0.83
RABGGTA-216ENST00000560243 FBXW12Q6X9E4 464 aa9.87□□□□□ -0.83
RABGGTA-216ENST00000560243 ZNF771Q7L3S4 317 aaPredicted RBP9.87□□□□□ -0.83
RABGGTA-216ENST00000560243 LINC01356Q8N9X3 169 aa9.87□□□□□ -0.83
RABGGTA-216ENST00000560243 OR2Z1Q8NG97 314 aa9.87□□□□□ -0.83
RABGGTA-216ENST00000560243 TEX47Q8TBZ9 253 aa9.87□□□□□ -0.83
RABGGTA-216ENST00000560243 CCL17Q92583 94 aa9.87□□□□□ -0.83
RABGGTA-216ENST00000560243 PTP4A1Q93096 173 aa9.87□□□□□ -0.83
RABGGTA-216ENST00000560243 APOBEC3DQ96AK3 386 aaPredicted RBP9.87□□□□□ -0.83
RABGGTA-216ENST00000560243 C1orf159Q96HA4 380 aa9.87□□□□□ -0.83
RABGGTA-216ENST00000560243 MDFIQ99750 246 aa9.87□□□□□ -0.83
RABGGTA-216ENST00000560243 ATF6BQ99941 703 aa9.87□□□□□ -0.83
RABGGTA-216ENST00000560243 C1QTNF5Q9BXJ0 243 aa9.87□□□□□ -0.83
RABGGTA-216ENST00000560243 LPAR2Q9HBW0 351 aa9.87□□□□□ -0.83
RABGGTA-216ENST00000560243 TUBG2Q9NRH3 451 aa9.87□□□□□ -0.83
RABGGTA-216ENST00000560243 CMC2Q9NRP2 79 aa9.87□□□□□ -0.83
RABGGTA-216ENST00000560243 CYSLTR2Q9NS75 346 aa9.87□□□□□ -0.83
RABGGTA-216ENST00000560243 CDC42EP3Q9UKI2 254 aa9.87□□□□□ -0.83
RABGGTA-216ENST00000560243 ZDHHC8Q9ULC8 765 aa9.87□□□□□ -0.83
RABGGTA-216ENST00000560243 KCNS2Q9ULS6 477 aa9.87□□□□□ -0.83
RABGGTA-216ENST00000560243 WIPI2Q9Y4P8 454 aa9.87□□□□□ -0.83
RABGGTA-216ENST00000560243 ARHGAP32A7KAX9 2087 aa9.87□□□□□ -0.83
RABGGTA-216ENST00000560243 IFNGP01579 166 aa9.86□□□□□ -0.83
RABGGTA-216ENST00000560243 CD55P08174 381 aa9.86□□□□□ -0.83
RABGGTA-216ENST00000560243 SPARCP09486 303 aa9.86□□□□□ -0.83
RABGGTA-216ENST00000560243 FMO3P31513 532 aa9.86□□□□□ -0.83
RABGGTA-216ENST00000560243 GRK5P34947 590 aa9.86□□□□□ -0.83
RABGGTA-216ENST00000560243 LIPAP38571 399 aa9.86□□□□□ -0.83
RABGGTA-216ENST00000560243 RGS6P49758 472 aa9.86□□□□□ -0.83
RABGGTA-216ENST00000560243 ECH1Q13011 328 aa9.86□□□□□ -0.83
RABGGTA-216ENST00000560243 GINS1Q14691 196 aa9.86□□□□□ -0.83
RABGGTA-216ENST00000560243 PCK2Q16822 640 aa9.86□□□□□ -0.83
RABGGTA-216ENST00000560243 CR1LQ2VPA4 569 aa9.86□□□□□ -0.83
RABGGTA-216ENST00000560243 HFEQ30201 348 aa9.86□□□□□ -0.83
RABGGTA-216ENST00000560243 ZMAT1Q5H9K5 638 aa9.86□□□□□ -0.83
RABGGTA-216ENST00000560243 TMEM236Q5W0B7 351 aa9.86□□□□□ -0.83
RABGGTA-216ENST00000560243 SPATC1Q76KD6 591 aa9.86□□□□□ -0.83
RABGGTA-216ENST00000560243 DCXRQ7Z4W1 244 aa9.86□□□□□ -0.83
RABGGTA-216ENST00000560243 BHLHE23Q8NDY6 225 aa9.86□□□□□ -0.83
RABGGTA-216ENST00000560243 OR6K6Q8NGW6 343 aa9.86□□□□□ -0.83
RABGGTA-216ENST00000560243 UTP4Q969X6 686 aaKnown RBP9.86□□□□□ -0.83
RABGGTA-216ENST00000560243 OTULINQ96BN8 352 aa9.86□□□□□ -0.83
RABGGTA-216ENST00000560243 ELMOD3Q96FG2 381 aa9.86□□□□□ -0.83
RABGGTA-216ENST00000560243 COG8Q96MW5 612 aa9.86□□□□□ -0.83
RABGGTA-216ENST00000560243 BEX2Q9BXY8 128 aa9.86□□□□□ -0.83
RABGGTA-216ENST00000560243 EGLN1Q9GZT9 426 aa9.86□□□□□ -0.83
RABGGTA-216ENST00000560243 DDX28Q9NUL7 540 aaKnown RBP9.86□□□□□ -0.83
RABGGTA-216ENST00000560243 TMEM160Q9NX00 188 aa9.86□□□□□ -0.83
RABGGTA-216ENST00000560243 CGGBP1Q9UFW8 167 aaPredicted RBP9.86□□□□□ -0.83
RABGGTA-216ENST00000560243 KCNG2Q9UJ96 466 aa9.86□□□□□ -0.83
RABGGTA-216ENST00000560243 STAB1Q9NY15 2570 aa9.86□□□□□ -0.83
RABGGTA-216ENST00000560243 IGHV3-64DA0A0J9YX35 117 aa9.85□□□□□ -0.83
RABGGTA-216ENST00000560243 CLDN25C9JDP6 229 aa9.85□□□□□ -0.83
RABGGTA-216ENST00000560243 H0YL77 283 aa9.85□□□□□ -0.83
RABGGTA-216ENST00000560243 J3QW42 95 aa9.85□□□□□ -0.83
RABGGTA-216ENST00000560243 ZNF593O00488 134 aaPredicted RBP9.85□□□□□ -0.83
RABGGTA-216ENST00000560243 LCATP04180 440 aa9.85□□□□□ -0.83
RABGGTA-216ENST00000560243 FAM157CP0CG43 387 aa9.85□□□□□ -0.83
RABGGTA-216ENST00000560243 OSMP13725 252 aa9.85□□□□□ -0.83
RABGGTA-216ENST00000560243 ZNF3P17036 446 aa9.85□□□□□ -0.83
RABGGTA-216ENST00000560243 HOXB6P17509 224 aaKnown RBP9.85□□□□□ -0.83
RABGGTA-216ENST00000560243 ENTPD1P49961 510 aa9.85□□□□□ -0.83
RABGGTA-216ENST00000560243 GK2Q14410 553 aaPredicted RBP9.85□□□□□ -0.83
RABGGTA-216ENST00000560243 SNAI3Q3KNW1 292 aa9.85□□□□□ -0.83
RABGGTA-216ENST00000560243 SLC27A4Q6P1M0 643 aa9.85□□□□□ -0.83
RABGGTA-216ENST00000560243 ATG16L2Q8NAA4 619 aa9.85□□□□□ -0.83
RABGGTA-216ENST00000560243 OR10AD1Q8NGE0 317 aa9.85□□□□□ -0.83
RABGGTA-216ENST00000560243 OR5L1Q8NGL2 311 aa9.85□□□□□ -0.83
RABGGTA-216ENST00000560243 ST7LQ8TDW4 575 aa9.85□□□□□ -0.83
RABGGTA-216ENST00000560243 ITLN1Q8WWA0 313 aa9.85□□□□□ -0.83
RABGGTA-216ENST00000560243 DIRC2Q96SL1 478 aa9.85□□□□□ -0.83
RABGGTA-216ENST00000560243 AMELYQ99218 206 aa9.85□□□□□ -0.83
RABGGTA-216ENST00000560243 SHARPINQ9H0F6 387 aa9.85□□□□□ -0.83
RABGGTA-216ENST00000560243 YY1AP1Q9H869 796 aa9.85□□□□□ -0.83
RABGGTA-216ENST00000560243 B4DSR2 109 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms