RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 DCLRE1BQ9H816 532 aa14.41□□□□□ -0.1
RPL28-209ENST00000560055 BARX1Q9HBU1 254 aaPredicted RBP14.41□□□□□ -0.1
RPL28-209ENST00000560055 C8orf4Q9NR00 106 aa14.41□□□□□ -0.1
RPL28-209ENST00000560055 HAO2Q9NYQ3 351 aa14.41□□□□□ -0.1
RPL28-209ENST00000560055 STARD10Q9Y365 291 aa14.41□□□□□ -0.1
RPL28-209ENST00000560055 M0R135 149 aa14.4□□□□□ -0.1
RPL28-209ENST00000560055 ADRA2AP08913 450 aa14.4□□□□□ -0.1
RPL28-209ENST00000560055 OPRL1P41146 370 aa14.4□□□□□ -0.1
RPL28-209ENST00000560055 ALDH3B1P43353 468 aa14.4□□□□□ -0.1
RPL28-209ENST00000560055 EFNA4P52798 201 aa14.4□□□□□ -0.1
RPL28-209ENST00000560055 NUDT6P53370 316 aa14.4□□□□□ -0.1
RPL28-209ENST00000560055 SELENOVP59797 346 aa14.4□□□□□ -0.1
RPL28-209ENST00000560055 MAD2L1BPQ15013 274 aaPredicted RBP14.4□□□□□ -0.1
RPL28-209ENST00000560055 SLC25A30Q5SVS4 291 aa14.4□□□□□ -0.1
RPL28-209ENST00000560055 LPCAT4Q643R3 524 aa14.4□□□□□ -0.1
RPL28-209ENST00000560055 SLC16A9Q7RTY1 509 aa14.4□□□□□ -0.1
RPL28-209ENST00000560055 TGIF2LYQ8IUE0 185 aa14.4□□□□□ -0.1
RPL28-209ENST00000560055 ZCCHC24Q8N2G6 241 aaKnown RBP14.4□□□□□ -0.1
RPL28-209ENST00000560055 UBE2FQ969M7 185 aa14.4□□□□□ -0.1
RPL28-209ENST00000560055 SPTSSAQ969W0 71 aa14.4□□□□□ -0.1
RPL28-209ENST00000560055 ZNF799Q96GE5 643 aa14.4□□□□□ -0.1
RPL28-209ENST00000560055 COG8Q96MW5 612 aa14.4□□□□□ -0.1
RPL28-209ENST00000560055 KCNJ15Q99712 375 aa14.4□□□□□ -0.1
RPL28-209ENST00000560055 COPS4Q9BT78 406 aa14.4□□□□□ -0.1
RPL28-209ENST00000560055 YIPF3Q9GZM5 350 aa14.4□□□□□ -0.1
RPL28-209ENST00000560055 ADGRL4Q9HBW9 690 aa14.4□□□□□ -0.1
RPL28-209ENST00000560055 SMPD3Q9NY59 655 aaPredicted RBP14.4□□□□□ -0.1
RPL28-209ENST00000560055 SLCO1C1Q9NYB5 712 aa14.4□□□□□ -0.1
RPL28-209ENST00000560055 TAAR3PQ9P1P4 343 aa14.4□□□□□ -0.1
RPL28-209ENST00000560055 KLHDC2Q9Y2U9 406 aa14.4□□□□□ -0.1
RPL28-209ENST00000560055 A0A1W2PPW3 197 aa14.39□□□□□ -0.11
RPL28-209ENST00000560055 SLC16A6O15403 523 aa14.39□□□□□ -0.11
RPL28-209ENST00000560055 F12P00748 615 aaPredicted RBP14.39□□□□□ -0.11
RPL28-209ENST00000560055 LYNP07948 512 aa14.39□□□□□ -0.11
RPL28-209ENST00000560055 ALOX5APP20292 161 aa14.39□□□□□ -0.11
RPL28-209ENST00000560055 ANOS1P23352 680 aa14.39□□□□□ -0.11
RPL28-209ENST00000560055 GCH1P30793 250 aa14.39□□□□□ -0.11
RPL28-209ENST00000560055 HTR1FP30939 366 aa14.39□□□□□ -0.11
RPL28-209ENST00000560055 TPTEP56180 551 aa14.39□□□□□ -0.11
RPL28-209ENST00000560055 RIPPLY3P57055 190 aa14.39□□□□□ -0.11
RPL28-209ENST00000560055 SNRPGP62308 76 aaKnown RBP14.39□□□□□ -0.11
RPL28-209ENST00000560055 GRB2P62993 217 aaKnown RBP14.39□□□□□ -0.11
RPL28-209ENST00000560055 LRRC36Q1X8D7 754 aa14.39□□□□□ -0.11
RPL28-209ENST00000560055 OGFRL1Q5TC84 451 aaPredicted RBP14.39□□□□□ -0.11
RPL28-209ENST00000560055 DRAM2Q6UX65 266 aa14.39□□□□□ -0.11
RPL28-209ENST00000560055 NAA40Q86UY6 237 aa14.39□□□□□ -0.11
RPL28-209ENST00000560055 PACRGLQ8N7B6 248 aa14.39□□□□□ -0.11
RPL28-209ENST00000560055 ZNF582Q96NG8 517 aaPredicted RBP14.39□□□□□ -0.11
RPL28-209ENST00000560055 RAB1BQ9H0U4 201 aa14.39□□□□□ -0.11
RPL28-209ENST00000560055 DYNLRB1Q9NP97 96 aa14.39□□□□□ -0.11
RPL28-209ENST00000560055 CENPMQ9NSP4 180 aa14.39□□□□□ -0.11
RPL28-209ENST00000560055 FAM118AQ9NWS6 357 aa14.39□□□□□ -0.11
RPL28-209ENST00000560055 IMPAD1Q9NX62 359 aa14.39□□□□□ -0.11
RPL28-209ENST00000560055 H2AFY2Q9P0M6 372 aaPredicted RBP14.39□□□□□ -0.11
RPL28-209ENST00000560055 GMPPBQ9Y5P6 360 aa14.39□□□□□ -0.11
RPL28-209ENST00000560055 NIPBLQ6KC79 2804 aaeCLIP14.39□□□□□ -0.11
RPL28-209ENST00000560055 LOC100130705A0A1B0GUX0 176 aa14.38□□□□□ -0.11
RPL28-209ENST00000560055 MRPL3P09001 348 aaKnown RBP14.38□□□□□ -0.11
RPL28-209ENST00000560055 GABRB1P18505 474 aa14.38□□□□□ -0.11
RPL28-209ENST00000560055 KITLGP21583 273 aa14.38□□□□□ -0.11
RPL28-209ENST00000560055 SLC15A1P46059 708 aa14.38□□□□□ -0.11
RPL28-209ENST00000560055 MMP15P51511 669 aa14.38□□□□□ -0.11
RPL28-209ENST00000560055 PSG7Q13046 419 aa14.38□□□□□ -0.11
RPL28-209ENST00000560055 NKPD1Q17RQ9 610 aa14.38□□□□□ -0.11
RPL28-209ENST00000560055 FBXW12Q6X9E4 464 aa14.38□□□□□ -0.11
RPL28-209ENST00000560055 SPATC1Q76KD6 591 aa14.38□□□□□ -0.11
RPL28-209ENST00000560055 GALNT4Q8N4A0 578 aa14.38□□□□□ -0.11
RPL28-209ENST00000560055 OR5L1Q8NGL2 311 aa14.38□□□□□ -0.11
RPL28-209ENST00000560055 CNN2Q99439 309 aaKnown RBP14.38□□□□□ -0.11
RPL28-209ENST00000560055 VRK1Q99986 396 aaPredicted RBP14.38□□□□□ -0.11
RPL28-209ENST00000560055 TMUB1Q9BVT8 246 aa14.38□□□□□ -0.11
RPL28-209ENST00000560055 MS4A5Q9H3V2 200 aa14.38□□□□□ -0.11
RPL28-209ENST00000560055 DNAJC27Q9NZQ0 273 aa14.38□□□□□ -0.11
RPL28-209ENST00000560055 NKX1-2Q9UD57 310 aaPredicted RBP14.38□□□□□ -0.11
RPL28-209ENST00000560055 WARS2Q9UGM6 360 aaKnown RBP14.38□□□□□ -0.11
RPL28-209ENST00000560055 SSX4O60224 188 aa14.37□□□□□ -0.11
RPL28-209ENST00000560055 LY6HO94772 140 aa14.37□□□□□ -0.11
RPL28-209ENST00000560055 NAT2P11245 290 aa14.37□□□□□ -0.11
RPL28-209ENST00000560055 CD99P14209 185 aa14.37□□□□□ -0.11
RPL28-209ENST00000560055 RAC2P15153 192 aa14.37□□□□□ -0.11
RPL28-209ENST00000560055 PRKXP51817 358 aa14.37□□□□□ -0.11
RPL28-209ENST00000560055 HCCSP53701 268 aa14.37□□□□□ -0.11
RPL28-209ENST00000560055 TMED1Q13445 227 aa14.37□□□□□ -0.11
RPL28-209ENST00000560055 TAF13Q15543 124 aa14.37□□□□□ -0.11
RPL28-209ENST00000560055 MOGQ16653 247 aa14.37□□□□□ -0.11
RPL28-209ENST00000560055 CLEC12BQ2HXU8 276 aa14.37□□□□□ -0.11
RPL28-209ENST00000560055 SNAI3Q3KNW1 292 aa14.37□□□□□ -0.11
RPL28-209ENST00000560055 PRSS45Q7RTY3 260 aa14.37□□□□□ -0.11
RPL28-209ENST00000560055 THEM6Q8WUY1 208 aa14.37□□□□□ -0.11
RPL28-209ENST00000560055 NEU4Q8WWR8 484 aaPredicted RBP14.37□□□□□ -0.11
RPL28-209ENST00000560055 GTF3AQ92664 365 aaKnown RBP14.37□□□□□ -0.11
RPL28-209ENST00000560055 HAVCR1Q96D42 359 aa14.37□□□□□ -0.11
RPL28-209ENST00000560055 CMBLQ96DG6 245 aa14.37□□□□□ -0.11
RPL28-209ENST00000560055 Q96MF0 132 aa14.37□□□□□ -0.11
RPL28-209ENST00000560055 TPK1Q9H3S4 243 aa14.37□□□□□ -0.11
RPL28-209ENST00000560055 GPR160Q9UJ42 338 aa14.37□□□□□ -0.11
RPL28-209ENST00000560055 LAMP5Q9UJQ1 280 aa14.37□□□□□ -0.11
RPL28-209ENST00000560055 PURGQ9UJV8 347 aaKnown RBP14.37□□□□□ -0.11
RPL28-209ENST00000560055 COPS3Q9UNS2 423 aa14.37□□□□□ -0.11
RPL28-209ENST00000560055 C5orf63A6NC05 138 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms