RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 ERFP50548 548 aa10.32□□□□□ -0.76
SPG11-219ENST00000559822 MALLQ13021 153 aa10.32□□□□□ -0.76
SPG11-219ENST00000559822 ZNF154Q13106 437 aa10.32□□□□□ -0.76
SPG11-219ENST00000559822 HLXQ14774 488 aaPredicted RBP10.32□□□□□ -0.76
SPG11-219ENST00000559822 MEP1BQ16820 701 aa10.32□□□□□ -0.76
SPG11-219ENST00000559822 ZNF181Q2M3W8 571 aa10.32□□□□□ -0.76
SPG11-219ENST00000559822 OTPQ5XKR4 325 aa10.32□□□□□ -0.76
SPG11-219ENST00000559822 RPL13AP3Q6NVV1 102 aa10.32□□□□□ -0.76
SPG11-219ENST00000559822 CPLX4Q7Z7G2 160 aa10.32□□□□□ -0.76
SPG11-219ENST00000559822 PGAM4Q8N0Y7 254 aa10.32□□□□□ -0.76
SPG11-219ENST00000559822 DEFB108BQ8NET1 73 aa10.32□□□□□ -0.76
SPG11-219ENST00000559822 SLC26A10Q8NG04 563 aa10.32□□□□□ -0.76
SPG11-219ENST00000559822 OR10AD1Q8NGE0 317 aa10.32□□□□□ -0.76
SPG11-219ENST00000559822 OR4K13Q8NH42 304 aa10.32□□□□□ -0.76
SPG11-219ENST00000559822 PLEKHA8Q96JA3 519 aa10.32□□□□□ -0.76
SPG11-219ENST00000559822 MEGF10Q96KG7 1140 aa10.32□□□□□ -0.76
SPG11-219ENST00000559822 TSSK2Q96PF2 358 aa10.32□□□□□ -0.76
SPG11-219ENST00000559822 NMNAT3Q96T66 252 aa10.32□□□□□ -0.76
SPG11-219ENST00000559822 PITX2Q99697 317 aa10.32□□□□□ -0.76
SPG11-219ENST00000559822 SLC30A2Q9BRI3 323 aa10.32□□□□□ -0.76
SPG11-219ENST00000559822 FAM107BQ9H098 131 aa10.32□□□□□ -0.76
SPG11-219ENST00000559822 SRA1Q9HD15 236 aaKnown RBP10.32□□□□□ -0.76
SPG11-219ENST00000559822 RPRD1BQ9NQG5 326 aaKnown RBP10.32□□□□□ -0.76
SPG11-219ENST00000559822 MIOXQ9UGB7 285 aa10.32□□□□□ -0.76
SPG11-219ENST00000559822 KCNG2Q9UJ96 466 aa10.32□□□□□ -0.76
SPG11-219ENST00000559822 NUP50Q9UKX7 468 aa10.32□□□□□ -0.76
SPG11-219ENST00000559822 NOP16Q9Y3C1 178 aaKnown RBP10.32□□□□□ -0.76
SPG11-219ENST00000559822 INSIG2Q9Y5U4 225 aa10.32□□□□□ -0.76
SPG11-219ENST00000559822 V9GYQ6 96 aa10.32□□□□□ -0.76
SPG11-219ENST00000559822 CEACAM18A8MTB9 384 aa10.31□□□□□ -0.76
SPG11-219ENST00000559822 DCTN6O00399 190 aa10.31□□□□□ -0.76
SPG11-219ENST00000559822 ATP8B1O43520 1251 aa10.31□□□□□ -0.76
SPG11-219ENST00000559822 SNX3O60493 162 aa10.31□□□□□ -0.76
SPG11-219ENST00000559822 FSTL3O95633 263 aa10.31□□□□□ -0.76
SPG11-219ENST00000559822 HLA-DQA2P01906 255 aa10.31□□□□□ -0.76
SPG11-219ENST00000559822 IRF2P14316 349 aa10.31□□□□□ -0.76
SPG11-219ENST00000559822 RPS2P15880 293 aaKnown RBP10.31□□□□□ -0.76
SPG11-219ENST00000559822 HIST1H1CP16403 213 aaKnown RBP10.31□□□□□ -0.76
SPG11-219ENST00000559822 SPATS1Q496A3 300 aa10.31□□□□□ -0.76
SPG11-219ENST00000559822 SLC18B1Q6NT16 456 aa10.31□□□□□ -0.76
SPG11-219ENST00000559822 CORO6Q6QEF8 472 aa10.31□□□□□ -0.76
SPG11-219ENST00000559822 BTNL3Q6UXE8 466 aa10.31□□□□□ -0.76
SPG11-219ENST00000559822 NLRC3Q7RTR2 1065 aa10.31□□□□□ -0.76
SPG11-219ENST00000559822 ZBTB46Q86UZ6 589 aa10.31□□□□□ -0.76
SPG11-219ENST00000559822 OR6V1Q8N148 313 aa10.31□□□□□ -0.76
SPG11-219ENST00000559822 LINC00471Q8N535 108 aa10.31□□□□□ -0.76
SPG11-219ENST00000559822 OR52L1Q8NGH7 329 aa10.31□□□□□ -0.76
SPG11-219ENST00000559822 GNPDA2Q8TDQ7 276 aa10.31□□□□□ -0.76
SPG11-219ENST00000559822 ERGIC1Q969X5 290 aa10.31□□□□□ -0.76
SPG11-219ENST00000559822 ATF6BQ99941 703 aa10.31□□□□□ -0.76
SPG11-219ENST00000559822 C1QTNF5Q9BXJ0 243 aa10.31□□□□□ -0.76
SPG11-219ENST00000559822 SLC22A4Q9H015 551 aa10.31□□□□□ -0.76
SPG11-219ENST00000559822 IL1RAPQ9NPH3 570 aa10.31□□□□□ -0.76
SPG11-219ENST00000559822 MMP26Q9NRE1 261 aa10.31□□□□□ -0.76
SPG11-219ENST00000559822 TMEM100Q9NV29 134 aa10.31□□□□□ -0.76
SPG11-219ENST00000559822 F5H5K5 113 aa10.3□□□□□ -0.76
SPG11-219ENST00000559822 ARPC2O15144 300 aa10.3□□□□□ -0.76
SPG11-219ENST00000559822 KRT36O76013 467 aa10.3□□□□□ -0.76
SPG11-219ENST00000559822 GPANK1O95872 356 aa10.3□□□□□ -0.76
SPG11-219ENST00000559822 ACSM4P0C7M7 580 aa10.3□□□□□ -0.76
SPG11-219ENST00000559822 ZNF823P16415 610 aa10.3□□□□□ -0.76
SPG11-219ENST00000559822 RRM2P31350 389 aa10.3□□□□□ -0.76
SPG11-219ENST00000559822 GSSP48637 474 aa10.3□□□□□ -0.76
SPG11-219ENST00000559822 RAD23AP54725 363 aa10.3□□□□□ -0.76
SPG11-219ENST00000559822 TPTEP56180 551 aa10.3□□□□□ -0.76
SPG11-219ENST00000559822 UBA52P62987 128 aaKnown RBP10.3□□□□□ -0.76
SPG11-219ENST00000559822 TSPAN31Q12999 210 aa10.3□□□□□ -0.76
SPG11-219ENST00000559822 C16orf89Q6UX73 402 aa10.3□□□□□ -0.76
SPG11-219ENST00000559822 LRRN1Q6UXK5 716 aa10.3□□□□□ -0.76
SPG11-219ENST00000559822 ZNF620Q6ZNG0 422 aa10.3□□□□□ -0.76
SPG11-219ENST00000559822 COLCA1Q6ZS62 124 aa10.3□□□□□ -0.76
SPG11-219ENST00000559822 LINC00346Q8IVM7 164 aa10.3□□□□□ -0.76
SPG11-219ENST00000559822 CELF2-AS1Q8N7Q2 184 aa10.3□□□□□ -0.76
SPG11-219ENST00000559822 BHLHE23Q8NDY6 225 aa10.3□□□□□ -0.76
SPG11-219ENST00000559822 OR11L1Q8NGX0 322 aa10.3□□□□□ -0.76
SPG11-219ENST00000559822 SGMS2Q8NHU3 365 aa10.3□□□□□ -0.76
SPG11-219ENST00000559822 C22orf15Q8WYQ4 148 aa10.3□□□□□ -0.76
SPG11-219ENST00000559822 DVL3Q92997 716 aaPredicted RBP10.3□□□□□ -0.76
SPG11-219ENST00000559822 SPTSSAQ969W0 71 aa10.3□□□□□ -0.76
SPG11-219ENST00000559822 NEIL1Q96FI4 390 aaPredicted RBP10.3□□□□□ -0.76
SPG11-219ENST00000559822 SSBP3Q9BWW4 388 aaPredicted RBP10.3□□□□□ -0.76
SPG11-219ENST00000559822 CYB5R1Q9UHQ9 305 aa10.3□□□□□ -0.76
SPG11-219ENST00000559822 ARHGAP32A7KAX9 2087 aa10.29□□□□□ -0.76
SPG11-219ENST00000559822 A0A1B0GWJ7 208 aa10.29□□□□□ -0.76
SPG11-219ENST00000559822 TRAPPC2LH3BP13 241 aa10.29□□□□□ -0.76
SPG11-219ENST00000559822 MLNRO43193 412 aa10.29□□□□□ -0.76
SPG11-219ENST00000559822 CYB5R3P00387 301 aaPredicted RBP10.29□□□□□ -0.76
SPG11-219ENST00000559822 LCATP04180 440 aa10.29□□□□□ -0.76
SPG11-219ENST00000559822 WNT2P09544 360 aa10.29□□□□□ -0.76
SPG11-219ENST00000559822 PPIAL4GP0DN37 164 aa10.29□□□□□ -0.76
SPG11-219ENST00000559822 GATA4P43694 442 aa10.29□□□□□ -0.76
SPG11-219ENST00000559822 SEC61A1P61619 476 aaKnown RBP10.29□□□□□ -0.76
SPG11-219ENST00000559822 GNB2P62879 340 aa10.29□□□□□ -0.76
SPG11-219ENST00000559822 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.29□□□□□ -0.76
SPG11-219ENST00000559822 TRAP1Q12931 704 aaKnown RBP10.29□□□□□ -0.76
SPG11-219ENST00000559822 FOXL1Q12952 345 aa10.29□□□□□ -0.76
SPG11-219ENST00000559822 GK2Q14410 553 aaPredicted RBP10.29□□□□□ -0.76
SPG11-219ENST00000559822 KRTAP27-1Q3LI81 207 aa10.29□□□□□ -0.76
SPG11-219ENST00000559822 CFAP77Q6ZQR2 320 aa10.29□□□□□ -0.76
SPG11-219ENST00000559822 PGAP1Q75T13 922 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms