RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 MAP6Q96JE9 813 aa9.29□□□□□ -0.92
SPG11-216ENST00000559347 DIRC2Q96SL1 478 aa9.29□□□□□ -0.92
SPG11-216ENST00000559347 CADM1Q9BY67 442 aaKnown RBP9.29□□□□□ -0.92
SPG11-216ENST00000559347 SHARPINQ9H0F6 387 aa9.29□□□□□ -0.92
SPG11-216ENST00000559347 CMC2Q9NRP2 79 aa9.29□□□□□ -0.92
SPG11-216ENST00000559347 PTTG3PQ9NZH4 202 aa9.29□□□□□ -0.92
SPG11-216ENST00000559347 TVP23AA6NH52 213 aa9.28□□□□□ -0.92
SPG11-216ENST00000559347 RIIAD1A6NNX1 92 aa9.28□□□□□ -0.92
SPG11-216ENST00000559347 FAM157AC9JC47 383 aa9.28□□□□□ -0.92
SPG11-216ENST00000559347 GNGT2O14610 69 aa9.28□□□□□ -0.92
SPG11-216ENST00000559347 FKBP6O75344 327 aa9.28□□□□□ -0.92
SPG11-216ENST00000559347 GYPBP06028 91 aa9.28□□□□□ -0.92
SPG11-216ENST00000559347 ACSM4P0C7M7 580 aa9.28□□□□□ -0.92
SPG11-216ENST00000559347 CLUP10909 449 aa9.28□□□□□ -0.92
SPG11-216ENST00000559347 RAC2P15153 192 aa9.28□□□□□ -0.92
SPG11-216ENST00000559347 ZNF3P17036 446 aa9.28□□□□□ -0.92
SPG11-216ENST00000559347 SPI1P17947 270 aa9.28□□□□□ -0.92
SPG11-216ENST00000559347 GRK5P34947 590 aa9.28□□□□□ -0.92
SPG11-216ENST00000559347 SLC25A1P53007 311 aa9.28□□□□□ -0.92
SPG11-216ENST00000559347 CBX1P83916 185 aa9.28□□□□□ -0.92
SPG11-216ENST00000559347 ECH1Q13011 328 aa9.28□□□□□ -0.92
SPG11-216ENST00000559347 CDK5R2Q13319 367 aa9.28□□□□□ -0.92
SPG11-216ENST00000559347 HLXQ14774 488 aaPredicted RBP9.28□□□□□ -0.92
SPG11-216ENST00000559347 HFEQ30201 348 aa9.28□□□□□ -0.92
SPG11-216ENST00000559347 FAM120AOSQ5T036 256 aa9.28□□□□□ -0.92
SPG11-216ENST00000559347 AVPI1Q5T686 147 aa9.28□□□□□ -0.92
SPG11-216ENST00000559347 COLCA1Q6ZS62 124 aa9.28□□□□□ -0.92
SPG11-216ENST00000559347 HS3ST5Q8IZT8 346 aa9.28□□□□□ -0.92
SPG11-216ENST00000559347 IQCF1Q8N6M8 205 aa9.28□□□□□ -0.92
SPG11-216ENST00000559347 LINC01356Q8N9X3 169 aa9.28□□□□□ -0.92
SPG11-216ENST00000559347 PAPD5Q8NDF8 572 aaKnown RBP9.28□□□□□ -0.92
SPG11-216ENST00000559347 OR51L1Q8NGJ5 315 aa9.28□□□□□ -0.92
SPG11-216ENST00000559347 OR2AJ1Q8NGZ0 328 aa9.28□□□□□ -0.92
SPG11-216ENST00000559347 SLCO4A1Q96BD0 722 aa9.28□□□□□ -0.92
SPG11-216ENST00000559347 HAVCR1Q96D42 359 aa9.28□□□□□ -0.92
SPG11-216ENST00000559347 CMBLQ96DG6 245 aa9.28□□□□□ -0.92
SPG11-216ENST00000559347 PITX2Q99697 317 aa9.28□□□□□ -0.92
SPG11-216ENST00000559347 CDADC1Q9BWV3 514 aa9.28□□□□□ -0.92
SPG11-216ENST00000559347 C1QTNF5Q9BXJ0 243 aa9.28□□□□□ -0.92
SPG11-216ENST00000559347 BEX2Q9BXY8 128 aa9.28□□□□□ -0.92
SPG11-216ENST00000559347 EGLN1Q9GZT9 426 aa9.28□□□□□ -0.92
SPG11-216ENST00000559347 WDR76Q9H967 626 aa9.28□□□□□ -0.92
SPG11-216ENST00000559347 DDX28Q9NUL7 540 aaKnown RBP9.28□□□□□ -0.92
SPG11-216ENST00000559347 PDP1Q9P0J1 537 aaPredicted RBP9.28□□□□□ -0.92
SPG11-216ENST00000559347 WIPI2Q9Y4P8 454 aa9.28□□□□□ -0.92
SPG11-216ENST00000559347 COL6A5A8TX70 2615 aa9.27□□□□□ -0.93
SPG11-216ENST00000559347 H3BN98 237 aa9.27□□□□□ -0.93
SPG11-216ENST00000559347 M0R135 149 aa9.27□□□□□ -0.93
SPG11-216ENST00000559347 GSC2O15499 205 aa9.27□□□□□ -0.93
SPG11-216ENST00000559347 E2F6O75461 281 aa9.27□□□□□ -0.93
SPG11-216ENST00000559347 IFNGP01579 166 aa9.27□□□□□ -0.93
SPG11-216ENST00000559347 ZNF823P16415 610 aa9.27□□□□□ -0.93
SPG11-216ENST00000559347 ANOS1P23352 680 aa9.27□□□□□ -0.93
SPG11-216ENST00000559347 OTX1P32242 354 aaPredicted RBP9.27□□□□□ -0.93
SPG11-216ENST00000559347 ENTPD1P49961 510 aa9.27□□□□□ -0.93
SPG11-216ENST00000559347 DVL1P1P54792 670 aaPredicted RBP9.27□□□□□ -0.93
SPG11-216ENST00000559347 LMO4P61968 165 aa9.27□□□□□ -0.93
SPG11-216ENST00000559347 TNFAIP6P98066 277 aaPredicted RBP9.27□□□□□ -0.93
SPG11-216ENST00000559347 MVKQ03426 396 aa9.27□□□□□ -0.93
SPG11-216ENST00000559347 HNRNPA0Q13151 305 aaKnown RBP9.27□□□□□ -0.93
SPG11-216ENST00000559347 PCK2Q16822 640 aa9.27□□□□□ -0.93
SPG11-216ENST00000559347 CR1LQ2VPA4 569 aa9.27□□□□□ -0.93
SPG11-216ENST00000559347 LINC01590Q5TEZ4 76 aa9.27□□□□□ -0.93
SPG11-216ENST00000559347 OR5AS1Q8N127 324 aa9.27□□□□□ -0.93
SPG11-216ENST00000559347 OR2Z1Q8NG97 314 aa9.27□□□□□ -0.93
SPG11-216ENST00000559347 OR5L1Q8NGL2 311 aa9.27□□□□□ -0.93
SPG11-216ENST00000559347 PTP4A1Q93096 173 aa9.27□□□□□ -0.93
SPG11-216ENST00000559347 ZNF799Q96GE5 643 aa9.27□□□□□ -0.93
SPG11-216ENST00000559347 HCAR1Q9BXC0 346 aa9.27□□□□□ -0.93
SPG11-216ENST00000559347 YY1AP1Q9H869 796 aa9.27□□□□□ -0.93
SPG11-216ENST00000559347 TREM2Q9NZC2 230 aa9.27□□□□□ -0.93
SPG11-216ENST00000559347 DNAJB9Q9UBS3 223 aa9.27□□□□□ -0.93
SPG11-216ENST00000559347 ANK2Q01484 3957 aa9.26□□□□□ -0.93
SPG11-216ENST00000559347 FAM183AA6NL82 134 aa9.26□□□□□ -0.93
SPG11-216ENST00000559347 IQCF6A8MYZ5 107 aa9.26□□□□□ -0.93
SPG11-216ENST00000559347 B4DSR2 109 aa9.26□□□□□ -0.93
SPG11-216ENST00000559347 F5H5K5 113 aa9.26□□□□□ -0.93
SPG11-216ENST00000559347 DEAF1O75398 565 aaPredicted RBP9.26□□□□□ -0.93
SPG11-216ENST00000559347 IGHV2-5P01817 119 aa9.26□□□□□ -0.93
SPG11-216ENST00000559347 MSMBP08118 114 aa9.26□□□□□ -0.93
SPG11-216ENST00000559347 SPARCP09486 303 aa9.26□□□□□ -0.93
SPG11-216ENST00000559347 TNFRSF1AP19438 455 aa9.26□□□□□ -0.93
SPG11-216ENST00000559347 HNF1AP20823 631 aa9.26□□□□□ -0.93
SPG11-216ENST00000559347 TNFSF4P23510 183 aa9.26□□□□□ -0.93
SPG11-216ENST00000559347 FMO3P31513 532 aa9.26□□□□□ -0.93
SPG11-216ENST00000559347 PRSS12P56730 875 aa9.26□□□□□ -0.93
SPG11-216ENST00000559347 GK2Q14410 553 aaPredicted RBP9.26□□□□□ -0.93
SPG11-216ENST00000559347 OR2T2Q6IF00 324 aa9.26□□□□□ -0.93
SPG11-216ENST00000559347 SLC27A4Q6P1M0 643 aa9.26□□□□□ -0.93
SPG11-216ENST00000559347 DCXRQ7Z4W1 244 aa9.26□□□□□ -0.93
SPG11-216ENST00000559347 GLCCI1Q86VQ1 547 aa9.26□□□□□ -0.93
SPG11-216ENST00000559347 ZNF511Q8NB15 262 aa9.26□□□□□ -0.93
SPG11-216ENST00000559347 BHLHE23Q8NDY6 225 aa9.26□□□□□ -0.93
SPG11-216ENST00000559347 OR8G5Q8NG78 346 aa9.26□□□□□ -0.93
SPG11-216ENST00000559347 OR10AD1Q8NGE0 317 aa9.26□□□□□ -0.93
SPG11-216ENST00000559347 OR6K6Q8NGW6 343 aa9.26□□□□□ -0.93
SPG11-216ENST00000559347 ST7LQ8TDW4 575 aa9.26□□□□□ -0.93
SPG11-216ENST00000559347 ITLN1Q8WWA0 313 aa9.26□□□□□ -0.93
SPG11-216ENST00000559347 CCL17Q92583 94 aa9.26□□□□□ -0.93
SPG11-216ENST00000559347 TIMD4Q96H15 378 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms