RNA–Protein interactions for RNA: ENST00000558815.5

RPL28-207, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-207ENST00000558815 PTP4A1Q93096 173 aa12.99□□□□□ -0.33
RPL28-207ENST00000558815 APOBEC3DQ96AK3 386 aaPredicted RBP12.99□□□□□ -0.33
RPL28-207ENST00000558815 MAP6Q96JE9 813 aa12.99□□□□□ -0.33
RPL28-207ENST00000558815 DIRC2Q96SL1 478 aa12.99□□□□□ -0.33
RPL28-207ENST00000558815 DDOQ99489 341 aa12.99□□□□□ -0.33
RPL28-207ENST00000558815 MED20Q9H944 212 aa12.99□□□□□ -0.33
RPL28-207ENST00000558815 TMEM160Q9NX00 188 aa12.99□□□□□ -0.33
RPL28-207ENST00000558815 WIPI2Q9Y4P8 454 aa12.99□□□□□ -0.33
RPL28-207ENST00000558815 FAM183AA6NL82 134 aa12.98□□□□□ -0.33
RPL28-207ENST00000558815 FAM157AC9JC47 383 aa12.98□□□□□ -0.33
RPL28-207ENST00000558815 GSC2O15499 205 aa12.98□□□□□ -0.33
RPL28-207ENST00000558815 FKBP6O75344 327 aa12.98□□□□□ -0.33
RPL28-207ENST00000558815 IFNA2P01563 188 aa12.98□□□□□ -0.33
RPL28-207ENST00000558815 LCATP04180 440 aa12.98□□□□□ -0.33
RPL28-207ENST00000558815 ACSM4P0C7M7 580 aa12.98□□□□□ -0.33
RPL28-207ENST00000558815 ZNF3P17036 446 aa12.98□□□□□ -0.33
RPL28-207ENST00000558815 SPI1P17947 270 aa12.98□□□□□ -0.33
RPL28-207ENST00000558815 SRD5A1P18405 259 aa12.98□□□□□ -0.33
RPL28-207ENST00000558815 TUBG1P23258 451 aa12.98□□□□□ -0.33
RPL28-207ENST00000558815 FMO3P31513 532 aa12.98□□□□□ -0.33
RPL28-207ENST00000558815 RBMXP38159 391 aaKnown RBP12.98□□□□□ -0.33
RPL28-207ENST00000558815 SLC6A9P48067 706 aa12.98□□□□□ -0.33
RPL28-207ENST00000558815 Q6ZR03 302 aa12.98□□□□□ -0.33
RPL28-207ENST00000558815 NAA40Q86UY6 237 aa12.98□□□□□ -0.33
RPL28-207ENST00000558815 ATG16L2Q8NAA4 619 aa12.98□□□□□ -0.33
RPL28-207ENST00000558815 ZNF511Q8NB15 262 aa12.98□□□□□ -0.33
RPL28-207ENST00000558815 BHLHE23Q8NDY6 225 aa12.98□□□□□ -0.33
RPL28-207ENST00000558815 RAB1CQ92928 201 aa12.98□□□□□ -0.33
RPL28-207ENST00000558815 HAVCR1Q96D42 359 aa12.98□□□□□ -0.33
RPL28-207ENST00000558815 TIMD4Q96H15 378 aa12.98□□□□□ -0.33
RPL28-207ENST00000558815 RBM4Q9BWF3 364 aaKnown RBP12.98□□□□□ -0.33
RPL28-207ENST00000558815 CADM1Q9BY67 442 aaKnown RBP12.98□□□□□ -0.33
RPL28-207ENST00000558815 YY1AP1Q9H869 796 aa12.98□□□□□ -0.33
RPL28-207ENST00000558815 TUBG2Q9NRH3 451 aa12.98□□□□□ -0.33
RPL28-207ENST00000558815 KCNG2Q9UJ96 466 aa12.98□□□□□ -0.33
RPL28-207ENST00000558815 COMMD3-BMI1R4GMX3 469 aa12.98□□□□□ -0.33
RPL28-207ENST00000558815 DYSFO75923 2080 aa12.97□□□□□ -0.33
RPL28-207ENST00000558815 B4DSR2 109 aa12.97□□□□□ -0.33
RPL28-207ENST00000558815 J3QW42 95 aa12.97□□□□□ -0.33
RPL28-207ENST00000558815 PSKH1P11801 424 aa12.97□□□□□ -0.33
RPL28-207ENST00000558815 RAC2P15153 192 aa12.97□□□□□ -0.33
RPL28-207ENST00000558815 PRKACGP22612 351 aa12.97□□□□□ -0.33
RPL28-207ENST00000558815 TPTEP56180 551 aa12.97□□□□□ -0.33
RPL28-207ENST00000558815 BNIP1Q12981 228 aa12.97□□□□□ -0.33
RPL28-207ENST00000558815 ECH1Q13011 328 aa12.97□□□□□ -0.33
RPL28-207ENST00000558815 CDK5R2Q13319 367 aa12.97□□□□□ -0.33
RPL28-207ENST00000558815 GK3PQ14409 553 aa12.97□□□□□ -0.33
RPL28-207ENST00000558815 TAF13Q15543 124 aa12.97□□□□□ -0.33
RPL28-207ENST00000558815 SPATC1Q76KD6 591 aa12.97□□□□□ -0.33
RPL28-207ENST00000558815 DCXRQ7Z4W1 244 aa12.97□□□□□ -0.33
RPL28-207ENST00000558815 GLCCI1Q86VQ1 547 aa12.97□□□□□ -0.33
RPL28-207ENST00000558815 OR10AD1Q8NGE0 317 aa12.97□□□□□ -0.33
RPL28-207ENST00000558815 ITLN1Q8WWA0 313 aa12.97□□□□□ -0.33
RPL28-207ENST00000558815 GAL3ST1Q99999 423 aa12.97□□□□□ -0.33
RPL28-207ENST00000558815 ZNF556Q9HAH1 456 aa12.97□□□□□ -0.33
RPL28-207ENST00000558815 PNRC2Q9NPJ4 139 aaKnown RBP12.97□□□□□ -0.33
RPL28-207ENST00000558815 CENPMQ9NSP4 180 aa12.97□□□□□ -0.33
RPL28-207ENST00000558815 DCAF16Q9NXF7 216 aa12.97□□□□□ -0.33
RPL28-207ENST00000558815 N6AMT1Q9Y5N5 214 aa12.97□□□□□ -0.33
RPL28-207ENST00000558815 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.96□□□□□ -0.339e-9■■■■□ 21.8
RPL28-207ENST00000558815 TCRBV3S1A0A5B6 114 aa12.96□□□□□ -0.33
RPL28-207ENST00000558815 ARRDC5A6NEK1 342 aa12.96□□□□□ -0.33
RPL28-207ENST00000558815 M0R135 149 aa12.96□□□□□ -0.33
RPL28-207ENST00000558815 TIPRLO75663 272 aa12.96□□□□□ -0.33
RPL28-207ENST00000558815 CD55P08174 381 aa12.96□□□□□ -0.33
RPL28-207ENST00000558815 ADH4P08319 380 aa12.96□□□□□ -0.33
RPL28-207ENST00000558815 GRK5P34947 590 aa12.96□□□□□ -0.33
RPL28-207ENST00000558815 ENTPD1P49961 510 aa12.96□□□□□ -0.33
RPL28-207ENST00000558815 SLC25A1P53007 311 aa12.96□□□□□ -0.33
RPL28-207ENST00000558815 LMO4P61968 165 aa12.96□□□□□ -0.33
RPL28-207ENST00000558815 SLC3A1Q07837 685 aa12.96□□□□□ -0.33
RPL28-207ENST00000558815 RSPO1Q2MKA7 263 aaPredicted RBP12.96□□□□□ -0.33
RPL28-207ENST00000558815 CD300LDQ6UXZ3 194 aa12.96□□□□□ -0.33
RPL28-207ENST00000558815 FBXW12Q6X9E4 464 aa12.96□□□□□ -0.33
RPL28-207ENST00000558815 PEG10Q86TG7 708 aaKnown RBP12.96□□□□□ -0.33
RPL28-207ENST00000558815 OR10S1Q8NGN2 331 aa12.96□□□□□ -0.33
RPL28-207ENST00000558815 SPTSSAQ969W0 71 aa12.96□□□□□ -0.33
RPL28-207ENST00000558815 ZNF799Q96GE5 643 aa12.96□□□□□ -0.33
RPL28-207ENST00000558815 ZNF582Q96NG8 517 aaPredicted RBP12.96□□□□□ -0.33
RPL28-207ENST00000558815 OR2V2Q96R30 315 aa12.96□□□□□ -0.33
RPL28-207ENST00000558815 MDFIQ99750 246 aa12.96□□□□□ -0.33
RPL28-207ENST00000558815 COPS4Q9BT78 406 aa12.96□□□□□ -0.33
RPL28-207ENST00000558815 HCAR1Q9BXC0 346 aa12.96□□□□□ -0.33
RPL28-207ENST00000558815 ZNF665Q9H7R5 613 aa12.96□□□□□ -0.33
RPL28-207ENST00000558815 CMC2Q9NRP2 79 aa12.96□□□□□ -0.33
RPL28-207ENST00000558815 UBAP1Q9NZ09 502 aa12.96□□□□□ -0.33
RPL28-207ENST00000558815 KIF17Q9P2E2 1029 aa12.96□□□□□ -0.33
RPL28-207ENST00000558815 TMEFF2Q9UIK5 374 aaPredicted RBP12.96□□□□□ -0.33
RPL28-207ENST00000558815 JMJD1CQ15652 2540 aa12.96□□□□□ -0.34
RPL28-207ENST00000558815 IGHV3-64DA0A0J9YX35 117 aa12.95□□□□□ -0.34
RPL28-207ENST00000558815 ZNF593O00488 134 aaPredicted RBP12.95□□□□□ -0.34
RPL28-207ENST00000558815 MSMBP08118 114 aa12.95□□□□□ -0.34
RPL28-207ENST00000558815 HOXB6P17509 224 aaKnown RBP12.95□□□□□ -0.34
RPL28-207ENST00000558815 TNFRSF1AP19438 455 aa12.95□□□□□ -0.34
RPL28-207ENST00000558815 SRP14P37108 136 aaKnown RBP12.95□□□□□ -0.34
RPL28-207ENST00000558815 PRKXP51817 358 aa12.95□□□□□ -0.34
RPL28-207ENST00000558815 DVL1P1P54792 670 aaPredicted RBP12.95□□□□□ -0.34
RPL28-207ENST00000558815 MALLQ13021 153 aa12.95□□□□□ -0.34
RPL28-207ENST00000558815 GINS1Q14691 196 aa12.95□□□□□ -0.34
RPL28-207ENST00000558815 KRTAP27-1Q3LI81 207 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms