RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 POFUT1Q9H488 388 aa10.58□□□□□ -0.72
SMAD3-205ENST00000558428 DDX28Q9NUL7 540 aaKnown RBP10.58□□□□□ -0.72
SMAD3-205ENST00000558428 PTTG3PQ9NZH4 202 aa10.58□□□□□ -0.72
SMAD3-205ENST00000558428 H2AFY2Q9P0M6 372 aaPredicted RBP10.58□□□□□ -0.72
SMAD3-205ENST00000558428 CCDC182A6NF36 153 aa10.57□□□□□ -0.72
SMAD3-205ENST00000558428 M0R135 149 aa10.57□□□□□ -0.72
SMAD3-205ENST00000558428 MT-ND5P03915 603 aa10.57□□□□□ -0.72
SMAD3-205ENST00000558428 TUBG1P23258 451 aa10.57□□□□□ -0.72
SMAD3-205ENST00000558428 SLC6A9P48067 706 aa10.57□□□□□ -0.72
SMAD3-205ENST00000558428 CDC42P60953 191 aa10.57□□□□□ -0.72
SMAD3-205ENST00000558428 EFNB1P98172 346 aa10.57□□□□□ -0.72
SMAD3-205ENST00000558428 TNK1Q13470 666 aa10.57□□□□□ -0.72
SMAD3-205ENST00000558428 RCN1Q15293 331 aa10.57□□□□□ -0.72
SMAD3-205ENST00000558428 TMEM255AQ5JRV8 349 aa10.57□□□□□ -0.72
SMAD3-205ENST00000558428 NXNL2Q5VZ03 156 aa10.57□□□□□ -0.72
SMAD3-205ENST00000558428 LURAP1LQ8IV03 231 aa10.57□□□□□ -0.72
SMAD3-205ENST00000558428 OR5L1Q8NGL2 311 aa10.57□□□□□ -0.72
SMAD3-205ENST00000558428 OTOSQ8NHW6 89 aa10.57□□□□□ -0.72
SMAD3-205ENST00000558428 CMBLQ96DG6 245 aa10.57□□□□□ -0.72
SMAD3-205ENST00000558428 ZNF799Q96GE5 643 aa10.57□□□□□ -0.72
SMAD3-205ENST00000558428 TEAD3Q99594 435 aa10.57□□□□□ -0.72
SMAD3-205ENST00000558428 SLC29A1Q99808 456 aa10.57□□□□□ -0.72
SMAD3-205ENST00000558428 RHNO1Q9BSD3 238 aa10.57□□□□□ -0.72
SMAD3-205ENST00000558428 ABHD6Q9BV23 337 aa10.57□□□□□ -0.72
SMAD3-205ENST00000558428 C1QTNF5Q9BXJ0 243 aa10.57□□□□□ -0.72
SMAD3-205ENST00000558428 TUBG2Q9NRH3 451 aa10.57□□□□□ -0.72
SMAD3-205ENST00000558428 PLSCR5A0PG75 271 aa10.56□□□□□ -0.72
SMAD3-205ENST00000558428 H7C1Q1 480 aa10.56□□□□□ -0.72
SMAD3-205ENST00000558428 TIMM8AO60220 97 aaPredicted RBP10.56□□□□□ -0.72
SMAD3-205ENST00000558428 LCATP04180 440 aa10.56□□□□□ -0.72
SMAD3-205ENST00000558428 LYNP07948 512 aa10.56□□□□□ -0.72
SMAD3-205ENST00000558428 MRPL3P09001 348 aaKnown RBP10.56□□□□□ -0.72
SMAD3-205ENST00000558428 CSF3P09919 207 aa10.56□□□□□ -0.72
SMAD3-205ENST00000558428 ANPEPP15144 967 aa10.56□□□□□ -0.72
SMAD3-205ENST00000558428 SLC15A1P46059 708 aa10.56□□□□□ -0.72
SMAD3-205ENST00000558428 PRKXP51817 358 aa10.56□□□□□ -0.72
SMAD3-205ENST00000558428 DSCR9P59020 149 aa10.56□□□□□ -0.72
SMAD3-205ENST00000558428 GRB2P62993 217 aaKnown RBP10.56□□□□□ -0.72
SMAD3-205ENST00000558428 PSG7Q13046 419 aa10.56□□□□□ -0.72
SMAD3-205ENST00000558428 CARTPTQ16568 116 aa10.56□□□□□ -0.72
SMAD3-205ENST00000558428 AADACL4Q5VUY2 407 aa10.56□□□□□ -0.72
SMAD3-205ENST00000558428 DNM1P46Q6ZS02 220 aa10.56□□□□□ -0.72
SMAD3-205ENST00000558428 COLCA1Q6ZS62 124 aa10.56□□□□□ -0.72
SMAD3-205ENST00000558428 MEPCEQ7L2J0 689 aaKnown RBP10.56□□□□□ -0.72
SMAD3-205ENST00000558428 SLC16A9Q7RTY1 509 aa10.56□□□□□ -0.72
SMAD3-205ENST00000558428 NAA40Q86UY6 237 aa10.56□□□□□ -0.72
SMAD3-205ENST00000558428 GID4Q8IVV7 300 aa10.56□□□□□ -0.72
SMAD3-205ENST00000558428 ZNF283Q8N7M2 679 aa10.56□□□□□ -0.72
SMAD3-205ENST00000558428 ZNF454Q8N9F8 522 aa10.56□□□□□ -0.72
SMAD3-205ENST00000558428 OR8J1Q8NGP2 316 aa10.56□□□□□ -0.72
SMAD3-205ENST00000558428 FAM81AQ8TBF8 368 aa10.56□□□□□ -0.72
SMAD3-205ENST00000558428 THEM6Q8WUY1 208 aa10.56□□□□□ -0.72
SMAD3-205ENST00000558428 RNF133Q8WVZ7 376 aa10.56□□□□□ -0.72
SMAD3-205ENST00000558428 FAM168AQ92567 244 aa10.56□□□□□ -0.72
SMAD3-205ENST00000558428 GTF3AQ92664 365 aaKnown RBP10.56□□□□□ -0.72
SMAD3-205ENST00000558428 HRASLS5Q96KN8 279 aa10.56□□□□□ -0.72
SMAD3-205ENST00000558428 AMELYQ99218 206 aa10.56□□□□□ -0.72
SMAD3-205ENST00000558428 KCNJ15Q99712 375 aa10.56□□□□□ -0.72
SMAD3-205ENST00000558428 TOR3AQ9H497 397 aa10.56□□□□□ -0.72
SMAD3-205ENST00000558428 IMPAD1Q9NX62 359 aa10.56□□□□□ -0.72
SMAD3-205ENST00000558428 PURGQ9UJV8 347 aaKnown RBP10.56□□□□□ -0.72
SMAD3-205ENST00000558428 CR1P17927 2039 aa10.55□□□□□ -0.72
SMAD3-205ENST00000558428 IGHV4-30-2A0A087WSY4 118 aa10.55□□□□□ -0.72
SMAD3-205ENST00000558428 SLC22A31A6NKX4 558 aa10.55□□□□□ -0.72
SMAD3-205ENST00000558428 C17orf100A8MU93 164 aa10.55□□□□□ -0.72
SMAD3-205ENST00000558428 SMAD7O15105 426 aaKnown RBP10.55□□□□□ -0.72
SMAD3-205ENST00000558428 SLC2A1P11166 492 aa10.55□□□□□ -0.72
SMAD3-205ENST00000558428 DAOP14920 347 aa10.55□□□□□ -0.72
SMAD3-205ENST00000558428 RAC2P15153 192 aa10.55□□□□□ -0.72
SMAD3-205ENST00000558428 HSD11B1P28845 292 aa10.55□□□□□ -0.72
SMAD3-205ENST00000558428 OTX1P32242 354 aaPredicted RBP10.55□□□□□ -0.72
SMAD3-205ENST00000558428 LIPAP38571 399 aa10.55□□□□□ -0.72
SMAD3-205ENST00000558428 PDLIM4P50479 330 aa10.55□□□□□ -0.72
SMAD3-205ENST00000558428 ZNF81P51508 661 aa10.55□□□□□ -0.72
SMAD3-205ENST00000558428 MMP15P51511 669 aa10.55□□□□□ -0.72
SMAD3-205ENST00000558428 HCCSP53701 268 aa10.55□□□□□ -0.72
SMAD3-205ENST00000558428 HLXQ14774 488 aaPredicted RBP10.55□□□□□ -0.72
SMAD3-205ENST00000558428 TRIP10Q15642 601 aa10.55□□□□□ -0.72
SMAD3-205ENST00000558428 DRAM2Q6UX65 266 aa10.55□□□□□ -0.72
SMAD3-205ENST00000558428 FBXW12Q6X9E4 464 aa10.55□□□□□ -0.72
SMAD3-205ENST00000558428 CIARTQ8N365 385 aaPredicted RBP10.55□□□□□ -0.72
SMAD3-205ENST00000558428 HAVCR1Q96D42 359 aa10.55□□□□□ -0.72
SMAD3-205ENST00000558428 C18orf12Q96KH6 178 aa10.55□□□□□ -0.72
SMAD3-205ENST00000558428 MBOAT4Q96T53 435 aa10.55□□□□□ -0.72
SMAD3-205ENST00000558428 CNN2Q99439 309 aaKnown RBP10.55□□□□□ -0.72
SMAD3-205ENST00000558428 YIPF3Q9GZM5 350 aa10.55□□□□□ -0.72
SMAD3-205ENST00000558428 MYOZ1Q9NP98 299 aaPredicted RBP10.55□□□□□ -0.72
SMAD3-205ENST00000558428 DLL4Q9NR61 685 aa10.55□□□□□ -0.72
SMAD3-205ENST00000558428 CYSLTR2Q9NS75 346 aa10.55□□□□□ -0.72
SMAD3-205ENST00000558428 CGGBP1Q9UFW8 167 aaPredicted RBP10.55□□□□□ -0.72
SMAD3-205ENST00000558428 LAMP5Q9UJQ1 280 aa10.55□□□□□ -0.72
SMAD3-205ENST00000558428 N6AMT1Q9Y5N5 214 aa10.55□□□□□ -0.72
SMAD3-205ENST00000558428 CSPG4Q6UVK1 2322 aa10.55□□□□□ -0.72
SMAD3-205ENST00000558428 RNF223E7ERA6 249 aa10.54□□□□□ -0.72
SMAD3-205ENST00000558428 SPRY3O43610 288 aa10.54□□□□□ -0.72
SMAD3-205ENST00000558428 H2BFMP0C1H6 154 aa10.54□□□□□ -0.72
SMAD3-205ENST00000558428 KITLGP21583 273 aa10.54□□□□□ -0.72
SMAD3-205ENST00000558428 OPRL1P41146 370 aa10.54□□□□□ -0.72
SMAD3-205ENST00000558428 MAGEB1P43366 347 aa10.54□□□□□ -0.72
SMAD3-205ENST00000558428 CX3CR1P49238 355 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms