RNA–Protein interactions for RNA: ENST00000558411.1

PCAT29-201, prostate cancer associated transcript 29, humanhuman

TSL 2 BASIC

Gene PCAT29, Length 2,121 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-201ENST00000558411 SURF2Q15527 256 aaPredicted RBP10.06□□□□□ -0.8
PCAT29-201ENST00000558411 ODF4Q2M2E3 257 aa10.06□□□□□ -0.8
PCAT29-201ENST00000558411 MIDNQ504T8 468 aa10.06□□□□□ -0.8
PCAT29-201ENST00000558411 DCXRQ7Z4W1 244 aa10.06□□□□□ -0.8
PCAT29-201ENST00000558411 PPP1R3BQ86XI6 285 aa10.06□□□□□ -0.8
PCAT29-201ENST00000558411 HIST3H2BBQ8N257 126 aa10.06□□□□□ -0.8
PCAT29-201ENST00000558411 LRRC75AQ8NAA5 344 aa10.06□□□□□ -0.8
PCAT29-201ENST00000558411 OR2L3Q8NG85 312 aa10.06□□□□□ -0.8
PCAT29-201ENST00000558411 MARCH1Q8TCQ1 289 aa10.06□□□□□ -0.8
PCAT29-201ENST00000558411 LIPHQ8WWY8 451 aa10.06□□□□□ -0.8
PCAT29-201ENST00000558411 ROBO4Q8WZ75 1007 aa10.06□□□□□ -0.8
PCAT29-201ENST00000558411 MR1Q95460 341 aa10.06□□□□□ -0.8
PCAT29-201ENST00000558411 RAB24Q969Q5 203 aa10.06□□□□□ -0.8
PCAT29-201ENST00000558411 ARSGQ96EG1 525 aa10.06□□□□□ -0.8
PCAT29-201ENST00000558411 IGSF21Q96ID5 467 aa10.06□□□□□ -0.8
PCAT29-201ENST00000558411 TSSK2Q96PF2 358 aa10.06□□□□□ -0.8
PCAT29-201ENST00000558411 SCGB3A2Q96PL1 93 aa10.06□□□□□ -0.8
PCAT29-201ENST00000558411 OR8B4Q96RC9 309 aa10.06□□□□□ -0.8
PCAT29-201ENST00000558411 CCNL2Q96S94 520 aaPredicted RBP10.06□□□□□ -0.8
PCAT29-201ENST00000558411 INTS14Q96SY0 518 aa10.06□□□□□ -0.8
PCAT29-201ENST00000558411 CMKLR1Q99788 373 aa10.06□□□□□ -0.8
PCAT29-201ENST00000558411 ARV1Q9H2C2 271 aa10.06□□□□□ -0.8
PCAT29-201ENST00000558411 ZMAT3Q9HA38 289 aaKnown RBP10.06□□□□□ -0.8
PCAT29-201ENST00000558411 GPR132Q9UNW8 380 aa10.06□□□□□ -0.8
PCAT29-201ENST00000558411 HIF3AQ9Y2N7 669 aa10.06□□□□□ -0.8
PCAT29-201ENST00000558411 A0A087WWC5 75 aa10.05□□□□□ -0.8
PCAT29-201ENST00000558411 H7C1Q1 480 aa10.05□□□□□ -0.8
PCAT29-201ENST00000558411 SYT7O43581 403 aa10.05□□□□□ -0.8
PCAT29-201ENST00000558411 NKX2-2O95096 273 aa10.05□□□□□ -0.8
PCAT29-201ENST00000558411 PRNPP04156 253 aa10.05□□□□□ -0.8
PCAT29-201ENST00000558411 SOD2P04179 222 aa10.05□□□□□ -0.8
PCAT29-201ENST00000558411 FCARP24071 287 aa10.05□□□□□ -0.8
PCAT29-201ENST00000558411 CHATP28329 748 aa10.05□□□□□ -0.8
PCAT29-201ENST00000558411 THBS4P35443 961 aa10.05□□□□□ -0.8
PCAT29-201ENST00000558411 ZNF157P51786 506 aaPredicted RBP10.05□□□□□ -0.8
PCAT29-201ENST00000558411 RAB32Q13637 225 aa10.05□□□□□ -0.8
PCAT29-201ENST00000558411 SLC17A1Q14916 467 aa10.05□□□□□ -0.8
PCAT29-201ENST00000558411 ITPRIPL2Q3MIP1 535 aa10.05□□□□□ -0.8
PCAT29-201ENST00000558411 ERN2Q76MJ5 926 aaKnown RBP10.05□□□□□ -0.8
PCAT29-201ENST00000558411 CRIPAKQ8N1N5 446 aa10.05□□□□□ -0.8
PCAT29-201ENST00000558411 NKAIN3Q8N8D7 197 aa10.05□□□□□ -0.8
PCAT29-201ENST00000558411 BHLHE23Q8NDY6 225 aa10.05□□□□□ -0.8
PCAT29-201ENST00000558411 OR6X1Q8NH79 312 aa10.05□□□□□ -0.8
PCAT29-201ENST00000558411 TERB2Q8NHR7 220 aa10.05□□□□□ -0.8
PCAT29-201ENST00000558411 ASB5Q8WWX0 329 aa10.05□□□□□ -0.8
PCAT29-201ENST00000558411 HOXB13Q92826 284 aaPredicted RBP10.05□□□□□ -0.8
PCAT29-201ENST00000558411 FAM46BQ96A09 425 aa10.05□□□□□ -0.8
PCAT29-201ENST00000558411 HHIPL1Q96JK4 782 aa10.05□□□□□ -0.8
PCAT29-201ENST00000558411 SERINC2Q96SA4 455 aa10.05□□□□□ -0.8
PCAT29-201ENST00000558411 EIF5A2Q9GZV4 153 aaKnown RBP10.05□□□□□ -0.8
PCAT29-201ENST00000558411 TAS2R4Q9NYW5 299 aa10.05□□□□□ -0.8
PCAT29-201ENST00000558411 CXXC1Q9P0U4 656 aaPredicted RBP10.05□□□□□ -0.8
PCAT29-201ENST00000558411 LUZP4Q9P127 313 aa10.05□□□□□ -0.8
PCAT29-201ENST00000558411 ZNF346Q9UL40 294 aaKnown RBP10.05□□□□□ -0.8
PCAT29-201ENST00000558411 COLEC10Q9Y6Z7 277 aa10.05□□□□□ -0.8
PCAT29-201ENST00000558411 DNAH12Q6ZR08 3092 aa10.05□□□□□ -0.8
PCAT29-201ENST00000558411 ZNF724A8MTY0 619 aa10.04□□□□□ -0.8
PCAT29-201ENST00000558411 GMFGO60234 142 aa10.04□□□□□ -0.8
PCAT29-201ENST00000558411 PTBP3O95758 552 aaKnown RBP10.04□□□□□ -0.8
PCAT29-201ENST00000558411 ADH1CP00326 375 aa10.04□□□□□ -0.8
PCAT29-201ENST00000558411 SEC11BP0C7V7 166 aa10.04□□□□□ -0.8
PCAT29-201ENST00000558411 DANCRP0C864 163 aa10.04□□□□□ -0.8
PCAT29-201ENST00000558411 CSF2RAP15509 400 aa10.04□□□□□ -0.8
PCAT29-201ENST00000558411 CXCR1P25024 350 aa10.04□□□□□ -0.8
PCAT29-201ENST00000558411 LMO1P25800 156 aa10.04□□□□□ -0.8
PCAT29-201ENST00000558411 CMPK1P30085 196 aa10.04□□□□□ -0.8
PCAT29-201ENST00000558411 GPR18Q14330 331 aa10.04□□□□□ -0.8
PCAT29-201ENST00000558411 MLF2Q15773 248 aaPredicted RBP10.04□□□□□ -0.8
PCAT29-201ENST00000558411 C14orf28Q4W4Y0 310 aa10.04□□□□□ -0.8
PCAT29-201ENST00000558411 OR2A2Q6IF42 318 aa10.04□□□□□ -0.8
PCAT29-201ENST00000558411 CLEC18BQ6UXF7 455 aa10.04□□□□□ -0.8
PCAT29-201ENST00000558411 CLEC9AQ6UXN8 241 aa10.04□□□□□ -0.8
PCAT29-201ENST00000558411 MED25Q71SY5 747 aa10.04□□□□□ -0.8
PCAT29-201ENST00000558411 DPY19L4Q7Z388 723 aa10.04□□□□□ -0.8
PCAT29-201ENST00000558411 ZAR1Q86SH2 424 aa10.04□□□□□ -0.8
PCAT29-201ENST00000558411 LRRC18Q8N456 261 aa10.04□□□□□ -0.8
PCAT29-201ENST00000558411 LFNGQ8NES3 379 aa10.04□□□□□ -0.8
PCAT29-201ENST00000558411 OR5T3Q8NGG3 340 aa10.04□□□□□ -0.8
PCAT29-201ENST00000558411 OR51F2Q8NH61 342 aa10.04□□□□□ -0.8
PCAT29-201ENST00000558411 OTOSQ8NHW6 89 aa10.04□□□□□ -0.8
PCAT29-201ENST00000558411 NT5CQ8TCD5 201 aa10.04□□□□□ -0.8
PCAT29-201ENST00000558411 IRF7Q92985 503 aa10.04□□□□□ -0.8
PCAT29-201ENST00000558411 TMEM230Q96A57 120 aa10.04□□□□□ -0.8
PCAT29-201ENST00000558411 MISP3Q96FF7 219 aa10.04□□□□□ -0.8
PCAT29-201ENST00000558411 INSM2Q96T92 566 aaPredicted RBP10.04□□□□□ -0.8
PCAT29-201ENST00000558411 CNTNAP3Q9BZ76 1288 aa10.04□□□□□ -0.8
PCAT29-201ENST00000558411 SRMSQ9H3Y6 488 aa10.04□□□□□ -0.8
PCAT29-201ENST00000558411 SRA1Q9HD15 236 aaKnown RBP10.04□□□□□ -0.8
PCAT29-201ENST00000558411 TM7SF3Q9NS93 570 aa10.04□□□□□ -0.8
PCAT29-201ENST00000558411 PISDQ9UG56 409 aa10.04□□□□□ -0.8
PCAT29-201ENST00000558411 ZDHHC8Q9ULC8 765 aa10.04□□□□□ -0.8
PCAT29-201ENST00000558411 STRAPQ9Y3F4 350 aaKnown RBP10.04□□□□□ -0.8
PCAT29-201ENST00000558411 OR5H15A6NDH6 313 aa10.04□□□□□ -0.8
PCAT29-201ENST00000558411 WIPF3A6NGB9 483 aa10.04□□□□□ -0.8
PCAT29-201ENST00000558411 OR5H1A6NKK0 313 aa10.04□□□□□ -0.8
PCAT29-201ENST00000558411 H3BSH0 61 aa10.04□□□□□ -0.8
PCAT29-201ENST00000558411 ZNF264O43296 627 aa10.04□□□□□ -0.8
PCAT29-201ENST00000558411 ZNF354AO60765 605 aaPredicted RBP10.04□□□□□ -0.8
PCAT29-201ENST00000558411 ZNF888P0CJ79 500 aaPredicted RBP10.04□□□□□ -0.8
PCAT29-201ENST00000558411 HPGDP15428 266 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms