RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 SIRPDQ9H106 197 aa4.27□□□□□ -1.73
SPG11-208ENST00000558155 MMADHCQ9H3L0 296 aaPredicted RBP4.27□□□□□ -1.73
SPG11-208ENST00000558155 TXNIPQ9H3M7 391 aa4.27□□□□□ -1.73
SPG11-208ENST00000558155 TMEM38AQ9H6F2 299 aa4.27□□□□□ -1.73
SPG11-208ENST00000558155 WDR55Q9H6Y2 383 aaPredicted RBP4.27□□□□□ -1.73
SPG11-208ENST00000558155 RNF7Q9UBF6 113 aa4.27□□□□□ -1.73
SPG11-208ENST00000558155 LGALS13Q9UHV8 139 aa4.27□□□□□ -1.73
SPG11-208ENST00000558155 TMCC3Q9ULS5 477 aa4.27□□□□□ -1.73
SPG11-208ENST00000558155 SLC7A7Q9UM01 511 aa4.27□□□□□ -1.73
SPG11-208ENST00000558155 FOXJ3Q9UPW0 622 aa4.27□□□□□ -1.73
SPG11-208ENST00000558155 CORO2BQ9UQ03 480 aa4.27□□□□□ -1.73
SPG11-208ENST00000558155 ANGPT4Q9Y264 503 aa4.27□□□□□ -1.73
SPG11-208ENST00000558155 KPTNQ9Y664 436 aa4.27□□□□□ -1.73
SPG11-208ENST00000558155 NBEAL2Q6ZNJ1 2754 aa4.27□□□□□ -1.73
SPG11-208ENST00000558155 IGHV3-64DA0A0J9YX35 117 aa4.26□□□□□ -1.73
SPG11-208ENST00000558155 A0A1B0GVI7 797 aa4.26□□□□□ -1.73
SPG11-208ENST00000558155 A0A1W2PPL8 197 aa4.26□□□□□ -1.73
SPG11-208ENST00000558155 ELOVL7A1L3X0 281 aa4.26□□□□□ -1.73
SPG11-208ENST00000558155 A6NIZ1 184 aa4.26□□□□□ -1.73
SPG11-208ENST00000558155 IQCF6A8MYZ5 107 aa4.26□□□□□ -1.73
SPG11-208ENST00000558155 M0R3H8 397 aa4.26□□□□□ -1.73
SPG11-208ENST00000558155 LGALS8O00214 317 aa4.26□□□□□ -1.73
SPG11-208ENST00000558155 FBP2O00757 339 aa4.26□□□□□ -1.73
SPG11-208ENST00000558155 UBDO15205 165 aa4.26□□□□□ -1.73
SPG11-208ENST00000558155 DOK2O60496 412 aa4.26□□□□□ -1.73
SPG11-208ENST00000558155 OR7A10O76100 309 aa4.26□□□□□ -1.73
SPG11-208ENST00000558155 LYPD3O95274 346 aa4.26□□□□□ -1.73
SPG11-208ENST00000558155 IGF2P01344 180 aa4.26□□□□□ -1.73
SPG11-208ENST00000558155 THY1P04216 161 aa4.26□□□□□ -1.73
SPG11-208ENST00000558155 VSIG10L2P0DP72 767 aa4.26□□□□□ -1.73
SPG11-208ENST00000558155 FAHP16930 419 aa4.26□□□□□ -1.73
SPG11-208ENST00000558155 GPX2P18283 190 aa4.26□□□□□ -1.73
SPG11-208ENST00000558155 CD247P20963 164 aa4.26□□□□□ -1.73
SPG11-208ENST00000558155 AQP1P29972 269 aa4.26□□□□□ -1.73
SPG11-208ENST00000558155 EFNB2P52799 333 aa4.26□□□□□ -1.73
SPG11-208ENST00000558155 RAP1BP61224 184 aa4.26□□□□□ -1.73
SPG11-208ENST00000558155 RPL27P61353 136 aaKnown RBP4.26□□□□□ -1.73
SPG11-208ENST00000558155 RAP1AP62834 184 aa4.26□□□□□ -1.73
SPG11-208ENST00000558155 FMODQ06828 376 aa4.26□□□□□ -1.73
SPG11-208ENST00000558155 CD69Q07108 199 aa4.26□□□□□ -1.73
SPG11-208ENST00000558155 DBPQ10586 325 aaPredicted RBP4.26□□□□□ -1.73
SPG11-208ENST00000558155 ENDOGQ14249 297 aaKnown RBP4.26□□□□□ -1.73
SPG11-208ENST00000558155 OR8B8Q15620 311 aa4.26□□□□□ -1.73
SPG11-208ENST00000558155 DUSP7Q16829 419 aa4.26□□□□□ -1.73
SPG11-208ENST00000558155 CDONQ4KMG0 1287 aa4.26□□□□□ -1.73
SPG11-208ENST00000558155 CCDC92Q53HC0 331 aaPredicted RBP4.26□□□□□ -1.73
SPG11-208ENST00000558155 ALG10Q5BKT4 473 aa4.26□□□□□ -1.73
SPG11-208ENST00000558155 INTS11Q5TA45 600 aaKnown RBP4.26□□□□□ -1.73
SPG11-208ENST00000558155 SFRP4Q6FHJ7 346 aaPredicted RBP4.26□□□□□ -1.73
SPG11-208ENST00000558155 SLC2A7Q6PXP3 512 aa4.26□□□□□ -1.73
SPG11-208ENST00000558155 METAP1DQ6UB28 335 aaPredicted RBP4.26□□□□□ -1.73
SPG11-208ENST00000558155 C1orf122Q6ZSJ8 110 aa4.26□□□□□ -1.73
SPG11-208ENST00000558155 FOXL2NBQ6ZUU3 175 aa4.26□□□□□ -1.73
SPG11-208ENST00000558155 VMO1Q7Z5L0 202 aa4.26□□□□□ -1.73
SPG11-208ENST00000558155 CALHM3Q86XJ0 350 aa4.26□□□□□ -1.73
SPG11-208ENST00000558155 NDUFA11Q86Y39 141 aa4.26□□□□□ -1.73
SPG11-208ENST00000558155 KLHDC1Q8N7A1 406 aa4.26□□□□□ -1.73
SPG11-208ENST00000558155 BOLLQ8N9W6 283 aaKnown RBP4.26□□□□□ -1.73
SPG11-208ENST00000558155 C19orf18Q8NEA5 215 aa4.26□□□□□ -1.73
SPG11-208ENST00000558155 WFDC9Q8NEX5 89 aa4.26□□□□□ -1.73
SPG11-208ENST00000558155 OR4C13Q8NGP0 309 aa4.26□□□□□ -1.73
SPG11-208ENST00000558155 OR1F12Q8NHA8 337 aa4.26□□□□□ -1.73
SPG11-208ENST00000558155 MOSPD2Q8NHP6 518 aa4.26□□□□□ -1.73
SPG11-208ENST00000558155 SLC26A7Q8TE54 656 aa4.26□□□□□ -1.73
SPG11-208ENST00000558155 LIPHQ8WWY8 451 aa4.26□□□□□ -1.73
SPG11-208ENST00000558155 APOBEC3DQ96AK3 386 aaPredicted RBP4.26□□□□□ -1.73
SPG11-208ENST00000558155 CLPTM1LQ96KA5 538 aa4.26□□□□□ -1.73
SPG11-208ENST00000558155 ZNF426Q9BUY5 554 aa4.26□□□□□ -1.73
SPG11-208ENST00000558155 HCAR1Q9BXC0 346 aa4.26□□□□□ -1.73
SPG11-208ENST00000558155 PCDHAC1Q9H158 963 aa4.26□□□□□ -1.73
SPG11-208ENST00000558155 FN3KRPQ9HA64 309 aa4.26□□□□□ -1.73
SPG11-208ENST00000558155 RAB18Q9NP72 206 aa4.26□□□□□ -1.73
SPG11-208ENST00000558155 MEPEQ9NQ76 525 aaPredicted RBP4.26□□□□□ -1.73
SPG11-208ENST00000558155 POLE4Q9NR33 117 aa4.26□□□□□ -1.73
SPG11-208ENST00000558155 SDR39U1Q9NRG7 319 aaPredicted RBP4.26□□□□□ -1.73
SPG11-208ENST00000558155 UFSP2Q9NUQ7 469 aa4.26□□□□□ -1.73
SPG11-208ENST00000558155 CHCHD3Q9NX63 227 aaKnown RBP4.26□□□□□ -1.73
SPG11-208ENST00000558155 PTTG3PQ9NZH4 202 aa4.26□□□□□ -1.73
SPG11-208ENST00000558155 ZNRD1Q9P1U0 126 aa4.26□□□□□ -1.73
SPG11-208ENST00000558155 SIGLEC9Q9Y336 463 aa4.26□□□□□ -1.73
SPG11-208ENST00000558155 CMYA5Q8N3K9 4069 aa4.26□□□□□ -1.73
SPG11-208ENST00000558155 LOC100653049A0A140TA62 436 aa4.25□□□□□ -1.73
SPG11-208ENST00000558155 HTR3EA5X5Y0 456 aa4.25□□□□□ -1.73
SPG11-208ENST00000558155 OR6C6A6NF89 314 aa4.25□□□□□ -1.73
SPG11-208ENST00000558155 K7EIL1 84 aa4.25□□□□□ -1.73
SPG11-208ENST00000558155 DVL1O14640 695 aa4.25□□□□□ -1.73
SPG11-208ENST00000558155 NPFFO15130 113 aa4.25□□□□□ -1.73
SPG11-208ENST00000558155 MLNRO43193 412 aa4.25□□□□□ -1.73
SPG11-208ENST00000558155 AHCYL1O43865 530 aa4.25□□□□□ -1.73
SPG11-208ENST00000558155 OR10H3O60404 316 aa4.25□□□□□ -1.73
SPG11-208ENST00000558155 FAM20BO75063 409 aa4.25□□□□□ -1.73
SPG11-208ENST00000558155 FBXO24O75426 580 aa4.25□□□□□ -1.73
SPG11-208ENST00000558155 KRT34O76011 436 aa4.25□□□□□ -1.73
SPG11-208ENST00000558155 PPP1R3DO95685 299 aa4.25□□□□□ -1.73
SPG11-208ENST00000558155 HLA-DPB1P04440 258 aa4.25□□□□□ -1.73
SPG11-208ENST00000558155 TSPAN19P0C672 248 aa4.25□□□□□ -1.73
SPG11-208ENST00000558155 KITP10721 976 aa4.25□□□□□ -1.73
SPG11-208ENST00000558155 BGNP21810 368 aa4.25□□□□□ -1.73
SPG11-208ENST00000558155 CD200P41217 278 aa4.25□□□□□ -1.73
SPG11-208ENST00000558155 RBM34P42696 430 aaKnown RBP4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms