RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 NME4O00746 187 aa13.31□□□□□ -0.28
SCFD1-224ENST00000557713 SOCS2O14508 198 aa13.31□□□□□ -0.28
SCFD1-224ENST00000557713 GSTA4O15217 222 aa13.31□□□□□ -0.28
SCFD1-224ENST00000557713 SLC22A2O15244 555 aa13.31□□□□□ -0.28
SCFD1-224ENST00000557713 SERPINA1P01009 418 aa13.31□□□□□ -0.28
SCFD1-224ENST00000557713 MDKP21741 143 aaPredicted RBP13.31□□□□□ -0.28
SCFD1-224ENST00000557713 OMPP47874 163 aa13.31□□□□□ -0.28
SCFD1-224ENST00000557713 DGCR6Q14129 220 aa13.31□□□□□ -0.28
SCFD1-224ENST00000557713 KRTAP27-1Q3LI81 207 aa13.31□□□□□ -0.28
SCFD1-224ENST00000557713 FAM201AQ5SY85 155 aa13.31□□□□□ -0.28
SCFD1-224ENST00000557713 C8orf82Q6P1X6 216 aaPredicted RBP13.31□□□□□ -0.28
SCFD1-224ENST00000557713 DPY19L2P2Q6ZN68 376 aa13.31□□□□□ -0.28
SCFD1-224ENST00000557713 ADCK1Q86TW2 530 aa13.31□□□□□ -0.28
SCFD1-224ENST00000557713 CYP4Z1Q86W10 505 aa13.31□□□□□ -0.28
SCFD1-224ENST00000557713 RP9Q8TA86 221 aaKnown RBP13.31□□□□□ -0.28
SCFD1-224ENST00000557713 TMIGD2Q96BF3 282 aa13.31□□□□□ -0.28
SCFD1-224ENST00000557713 PLEKHA8Q96JA3 519 aa13.31□□□□□ -0.28
SCFD1-224ENST00000557713 TSSK2Q96PF2 358 aa13.31□□□□□ -0.28
SCFD1-224ENST00000557713 HDHD2Q9H0R4 259 aa13.31□□□□□ -0.28
SCFD1-224ENST00000557713 TMEM100Q9NV29 134 aa13.31□□□□□ -0.28
SCFD1-224ENST00000557713 ARMCX1Q9P291 453 aa13.31□□□□□ -0.28
SCFD1-224ENST00000557713 MMP24Q9Y5R2 645 aa13.31□□□□□ -0.28
SCFD1-224ENST00000557713 TRAV40A0A0B4J280 105 aa13.3□□□□□ -0.28
SCFD1-224ENST00000557713 MDFIC2A0A1B0GVS7 189 aa13.3□□□□□ -0.28
SCFD1-224ENST00000557713 LRRC30A6NM36 301 aa13.3□□□□□ -0.28
SCFD1-224ENST00000557713 H1F0P07305 194 aaKnown RBP13.3□□□□□ -0.28
SCFD1-224ENST00000557713 SELEP16581 610 aa13.3□□□□□ -0.28
SCFD1-224ENST00000557713 GATA4P43694 442 aa13.3□□□□□ -0.28
SCFD1-224ENST00000557713 COX10Q12887 443 aa13.3□□□□□ -0.28
SCFD1-224ENST00000557713 MAB21L1Q13394 359 aa13.3□□□□□ -0.28
SCFD1-224ENST00000557713 MEP1BQ16820 701 aa13.3□□□□□ -0.28
SCFD1-224ENST00000557713 PGM2L1Q6PCE3 622 aa13.3□□□□□ -0.28
SCFD1-224ENST00000557713 LYPD2Q6UXB3 125 aa13.3□□□□□ -0.28
SCFD1-224ENST00000557713 ZNF841Q6ZN19 808 aa13.3□□□□□ -0.28
SCFD1-224ENST00000557713 C1orf87Q8N0U7 546 aa13.3□□□□□ -0.28
SCFD1-224ENST00000557713 FITM2Q8N6M3 262 aa13.3□□□□□ -0.28
SCFD1-224ENST00000557713 BHLHE23Q8NDY6 225 aa13.3□□□□□ -0.28
SCFD1-224ENST00000557713 OR8B3Q8NGG8 313 aa13.3□□□□□ -0.28
SCFD1-224ENST00000557713 OR10S1Q8NGN2 331 aa13.3□□□□□ -0.28
SCFD1-224ENST00000557713 RSRC1Q96IZ7 334 aaKnown RBP13.3□□□□□ -0.28
SCFD1-224ENST00000557713 OR8B2Q96RD0 313 aa13.3□□□□□ -0.28
SCFD1-224ENST00000557713 HOPXQ9BPY8 73 aaPredicted RBP13.3□□□□□ -0.28
SCFD1-224ENST00000557713 NUDT16L1Q9BRJ7 211 aaKnown RBP13.3□□□□□ -0.28
SCFD1-224ENST00000557713 WDR76Q9H967 626 aa13.3□□□□□ -0.28
SCFD1-224ENST00000557713 CMYA5Q8N3K9 4069 aa13.29□□□□□ -0.28
SCFD1-224ENST00000557713 IGLV1-36A0A0B4J1U3 117 aa13.29□□□□□ -0.28
SCFD1-224ENST00000557713 HOXA3O43365 443 aaPredicted RBP13.29□□□□□ -0.28
SCFD1-224ENST00000557713 HLA-DPB1P04440 258 aa13.29□□□□□ -0.28
SCFD1-224ENST00000557713 COX4I1P13073 169 aa13.29□□□□□ -0.28
SCFD1-224ENST00000557713 FPR3P25089 353 aa13.29□□□□□ -0.28
SCFD1-224ENST00000557713 CRABP1P29762 137 aa13.29□□□□□ -0.28
SCFD1-224ENST00000557713 PITPNBP48739 271 aa13.29□□□□□ -0.28
SCFD1-224ENST00000557713 GSK3BP49841 420 aa13.29□□□□□ -0.28
SCFD1-224ENST00000557713 RPS6KA3P51812 740 aa13.29□□□□□ -0.28
SCFD1-224ENST00000557713 SLC7A2P52569 658 aa13.29□□□□□ -0.28
SCFD1-224ENST00000557713 SEC23BQ15437 767 aa13.29□□□□□ -0.28
SCFD1-224ENST00000557713 DEFB112Q30KQ8 113 aa13.29□□□□□ -0.28
SCFD1-224ENST00000557713 PDLIM3Q53GG5 364 aaPredicted RBP13.29□□□□□ -0.28
SCFD1-224ENST00000557713 WDR25Q64LD2 544 aaPredicted RBP13.29□□□□□ -0.28
SCFD1-224ENST00000557713 CORO6Q6QEF8 472 aa13.29□□□□□ -0.28
SCFD1-224ENST00000557713 BRD3OSQ6XYD6 125 aa13.29□□□□□ -0.28
SCFD1-224ENST00000557713 CELF2-AS1Q8N7Q2 184 aa13.29□□□□□ -0.28
SCFD1-224ENST00000557713 Q8TCH9 128 aa13.29□□□□□ -0.28
SCFD1-224ENST00000557713 NDUFAF4Q9P032 175 aa13.29□□□□□ -0.28
SCFD1-224ENST00000557713 CLN8Q9UBY8 286 aa13.29□□□□□ -0.28
SCFD1-224ENST00000557713 RPS6KA6Q9UK32 745 aa13.29□□□□□ -0.28
SCFD1-224ENST00000557713 B9D1Q9UPM9 204 aa13.29□□□□□ -0.28
SCFD1-224ENST00000557713 POLR1DQ9Y2S0 133 aa13.29□□□□□ -0.28
SCFD1-224ENST00000557713 TRBV4-1A0A0J9YWV2 114 aa13.28□□□□□ -0.28
SCFD1-224ENST00000557713 UNC119BA6NIH7 251 aa13.28□□□□□ -0.28
SCFD1-224ENST00000557713 SASH3O75995 380 aa13.28□□□□□ -0.28
SCFD1-224ENST00000557713 PPP1R3DO95685 299 aa13.28□□□□□ -0.28
SCFD1-224ENST00000557713 ACSM4P0C7M7 580 aa13.28□□□□□ -0.28
SCFD1-224ENST00000557713 H2AFXP16104 143 aaPredicted RBP13.28□□□□□ -0.28
SCFD1-224ENST00000557713 NCK1P16333 377 aa13.28□□□□□ -0.28
SCFD1-224ENST00000557713 OMGP23515 440 aa13.28□□□□□ -0.28
SCFD1-224ENST00000557713 PSMB10P40306 273 aa13.28□□□□□ -0.28
SCFD1-224ENST00000557713 CENPAP49450 140 aa13.28□□□□□ -0.28
SCFD1-224ENST00000557713 RAD23AP54725 363 aa13.28□□□□□ -0.28
SCFD1-224ENST00000557713 PRSS12P56730 875 aa13.28□□□□□ -0.28
SCFD1-224ENST00000557713 FGF12P61328 243 aa13.28□□□□□ -0.28
SCFD1-224ENST00000557713 DEFA6Q01524 100 aa13.28□□□□□ -0.28
SCFD1-224ENST00000557713 GK2Q14410 553 aaPredicted RBP13.28□□□□□ -0.28
SCFD1-224ENST00000557713 DNM1P34Q6PK57 102 aa13.28□□□□□ -0.28
SCFD1-224ENST00000557713 DCDC5Q6ZRR9 648 aa13.28□□□□□ -0.28
SCFD1-224ENST00000557713 SPATC1Q76KD6 591 aa13.28□□□□□ -0.28
SCFD1-224ENST00000557713 NLRC3Q7RTR2 1065 aa13.28□□□□□ -0.28
SCFD1-224ENST00000557713 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.28□□□□□ -0.28
SCFD1-224ENST00000557713 NAA40Q86UY6 237 aa13.28□□□□□ -0.28
SCFD1-224ENST00000557713 OR6V1Q8N148 313 aa13.28□□□□□ -0.28
SCFD1-224ENST00000557713 ERGIC1Q969X5 290 aa13.28□□□□□ -0.28
SCFD1-224ENST00000557713 C7orf34Q96L11 122 aa13.28□□□□□ -0.28
SCFD1-224ENST00000557713 FUZQ9BT04 418 aa13.28□□□□□ -0.28
SCFD1-224ENST00000557713 CDADC1Q9BWV3 514 aa13.28□□□□□ -0.28
SCFD1-224ENST00000557713 HCAR1Q9BXC0 346 aa13.28□□□□□ -0.28
SCFD1-224ENST00000557713 SRA1Q9HD15 236 aaKnown RBP13.28□□□□□ -0.28
SCFD1-224ENST00000557713 SRRM5B3KS81 715 aa13.27□□□□□ -0.29
SCFD1-224ENST00000557713 PHYHO14832 338 aa13.27□□□□□ -0.29
SCFD1-224ENST00000557713 RHCEP18577 417 aa13.27□□□□□ -0.29
SCFD1-224ENST00000557713 MDH1P40925 334 aaKnown RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms