RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 OR10C1Q96KK4 312 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 B3GALT6Q96L58 329 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 TMEM43Q9BTV4 400 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 MED18Q9BUE0 208 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 TSSK1BQ9BXA7 367 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 PORCNQ9H237 461 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 BOLA2Q9H3K6 86 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 ALG9Q9H6U8 611 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 MEAF6Q9HAF1 191 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 OR2S2Q9NQN1 319 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 BIN3Q9NQY0 253 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 ABCB10Q9NRK6 738 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 DDX19AQ9NUU7 478 aaKnown RBP1.32□□□□□ -2.2
HIF1A-212ENST00000557538 IMPAD1Q9NX62 359 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 GOLT1BQ9Y3E0 138 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 LTN1O94822 1766 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 PIK3C2GO75747 1445 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 TP53BP1Q12888 1972 aaPredicted RBP1.32□□□□□ -2.2
HIF1A-212ENST00000557538 PIK3C2BO00750 1634 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 PRSS37A4D1T9 235 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 LRIT2A6NDA9 550 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 A8MXK9 166 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 OR11H12B2RN74 326 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 RPL36A-HNRNPH2H7BZ11 118 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 TP53I11O14683 189 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 RS1O15537 224 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 RGS5O15539 181 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 ZNF780AO75290 641 aaPredicted RBP1.32□□□□□ -2.2
HIF1A-212ENST00000557538 GJB5O95377 273 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 CLDN9O95484 217 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 CTSLP07711 333 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 ACSM4P0C7M7 580 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 OCM2P0CE71 109 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 OCMP0CE72 109 aaPredicted RBP1.32□□□□□ -2.2
HIF1A-212ENST00000557538 ZNF35P13682 527 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 CPN1P15169 458 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 ZNF250P15622 560 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 RPA2P15927 270 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 PAX6P26367 422 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 PCK1P35558 622 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 IFNGR2P38484 337 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 CD200P41217 278 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 YAP1P46937 504 aaKnown RBP1.32□□□□□ -2.2
HIF1A-212ENST00000557538 OR1D4P47884 311 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 RFX3P48380 749 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 HSPA2P54652 639 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 KRTAP10-6P60371 365 aaPredicted RBP1.32□□□□□ -2.2
HIF1A-212ENST00000557538 RPS20P60866 119 aaKnown RBP1.32□□□□□ -2.2
HIF1A-212ENST00000557538 NCALDP61601 193 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 EMX2Q04743 252 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 PTGES3Q15185 160 aaKnown RBP1.32□□□□□ -2.2
HIF1A-212ENST00000557538 PSG5Q15238 335 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 SF3A2Q15428 464 aaKnown RBP1.32□□□□□ -2.2
HIF1A-212ENST00000557538 TRIP13Q15645 432 aaPredicted RBP1.32□□□□□ -2.2
HIF1A-212ENST00000557538 UBE2UQ5VVX9 321 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 C1orf94Q6P1W5 598 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 EIF3MQ7L2H7 374 aaKnown RBP1.32□□□□□ -2.2
HIF1A-212ENST00000557538 SSX9Q7RTT3 188 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 SMIM15Q7Z3B0 74 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 GRINAQ7Z429 371 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 CALHM1Q8IU99 346 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 CCDC71Q8IV32 467 aaPredicted RBP1.32□□□□□ -2.2
HIF1A-212ENST00000557538 LYG1Q8N1E2 194 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 C8orf31Q8N9H6 132 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 OR11H1Q8NG94 326 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 OR10H4Q8NGA5 316 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 OR2AP1Q8NGE2 309 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 OR51L1Q8NGJ5 315 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 OR11H2Q8NH07 326 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 SFT2D1Q8WV19 159 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 RGP1Q92546 391 aaPredicted RBP1.32□□□□□ -2.2
HIF1A-212ENST00000557538 SMARCD2Q92925 531 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 ZBED6CLQ96FA7 236 aaPredicted RBP1.32□□□□□ -2.2
HIF1A-212ENST00000557538 AMDHD1Q96NU7 426 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 ATOH8Q96SQ7 321 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 CITED1Q99966 193 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 ZNF426Q9BUY5 554 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 MAP1LC3CQ9BXW4 147 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 RAB17Q9H0T7 212 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 TLNRD1Q9H1K6 362 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 ANKRD19PQ9H560 264 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 ELOVL6Q9H5J4 265 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 TPT1P8Q9HAU6 139 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 NRN1Q9NPD7 142 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 EXOSC3Q9NQT5 275 aaKnown RBP1.32□□□□□ -2.2
HIF1A-212ENST00000557538 GPR83Q9NYM4 423 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 OPTCQ9UBM4 332 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 GLS2Q9UI32 602 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 B9D1Q9UPM9 204 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 NEU3Q9UQ49 428 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 CA5BQ9Y2D0 317 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 UTP11Q9Y3A2 253 aaKnown RBP1.32□□□□□ -2.2
HIF1A-212ENST00000557538 NPTNQ9Y639 398 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 URGCP-MRPS24S4R325 110 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 SF3B1O75533 1304 aaKnown RBP eCLIP1.32□□□□□ -2.24e-6■■■■□ 20.1
HIF1A-212ENST00000557538 PPLO60437 1756 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 METP08581 1390 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 NUP210LQ5VU65 1888 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 DENND4AQ7Z401 1863 aa1.32□□□□□ -2.2
HIF1A-212ENST00000557538 PLCH2O75038 1416 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms