RNA–Protein interactions for RNA: ENST00000557490.5

TUBB3-214, Transcript of tubulin beta 3 class III, humanhuman

TSL 5

Gene TUBB3, Length 806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-214ENST00000557490 GGTLC2Q14390 218 aa13.54□□□□□ -0.24
TUBB3-214ENST00000557490 TAF13Q15543 124 aa13.54□□□□□ -0.24
TUBB3-214ENST00000557490 SNAPC1Q16533 368 aa13.54□□□□□ -0.24
TUBB3-214ENST00000557490 ZMAT1Q5H9K5 638 aa13.54□□□□□ -0.24
TUBB3-214ENST00000557490 TEX30Q5JUR7 227 aa13.54□□□□□ -0.24
TUBB3-214ENST00000557490 TMEM236Q5W0B7 351 aa13.54□□□□□ -0.24
TUBB3-214ENST00000557490 PYDC1Q8WXC3 89 aa13.54□□□□□ -0.24
TUBB3-214ENST00000557490 RDH5Q92781 318 aa13.54□□□□□ -0.24
TUBB3-214ENST00000557490 PTP4A1Q93096 173 aa13.54□□□□□ -0.24
TUBB3-214ENST00000557490 SPTSSAQ969W0 71 aa13.54□□□□□ -0.24
TUBB3-214ENST00000557490 CMBLQ96DG6 245 aa13.54□□□□□ -0.24
TUBB3-214ENST00000557490 RAB3IPQ96QF0 476 aaPredicted RBP13.54□□□□□ -0.24
TUBB3-214ENST00000557490 HCAR1Q9BXC0 346 aa13.54□□□□□ -0.24
TUBB3-214ENST00000557490 GABARAPL1Q9H0R8 117 aa13.54□□□□□ -0.24
TUBB3-214ENST00000557490 SEMA6AQ9H2E6 1030 aa13.54□□□□□ -0.24
TUBB3-214ENST00000557490 POFUT1Q9H488 388 aa13.54□□□□□ -0.24
TUBB3-214ENST00000557490 PNRC2Q9NPJ4 139 aaKnown RBP13.54□□□□□ -0.24
TUBB3-214ENST00000557490 DECR2Q9NUI1 292 aa13.54□□□□□ -0.24
TUBB3-214ENST00000557490 NKIRAS2Q9NYR9 191 aa13.54□□□□□ -0.24
TUBB3-214ENST00000557490 TVP23BQ9NYZ1 205 aa13.54□□□□□ -0.24
TUBB3-214ENST00000557490 ENOPH1Q9UHY7 261 aa13.54□□□□□ -0.24
TUBB3-214ENST00000557490 ANK2Q01484 3957 aa13.54□□□□□ -0.24
TUBB3-214ENST00000557490 A0A096LNT2 108 aa13.53□□□□□ -0.24
TUBB3-214ENST00000557490 LYNX1G3V0Z9 82 aa13.53□□□□□ -0.24
TUBB3-214ENST00000557490 SPRY3O43610 288 aa13.53□□□□□ -0.24
TUBB3-214ENST00000557490 ACSM4P0C7M7 580 aa13.53□□□□□ -0.24
TUBB3-214ENST00000557490 LYNX1P0DP58 116 aa13.53□□□□□ -0.24
TUBB3-214ENST00000557490 GIFP27352 417 aa13.53□□□□□ -0.24
TUBB3-214ENST00000557490 MMP15P51511 669 aa13.53□□□□□ -0.24
TUBB3-214ENST00000557490 CCL8P80075 99 aa13.53□□□□□ -0.24
TUBB3-214ENST00000557490 MRPS11P82912 194 aaKnown RBP13.53□□□□□ -0.24
TUBB3-214ENST00000557490 TSTQ16762 297 aaKnown RBP13.53□□□□□ -0.24
TUBB3-214ENST00000557490 PCK2Q16822 640 aa13.53□□□□□ -0.24
TUBB3-214ENST00000557490 KRTAP27-1Q3LI81 207 aa13.53□□□□□ -0.24
TUBB3-214ENST00000557490 KLHL12Q53G59 568 aa13.53□□□□□ -0.24
TUBB3-214ENST00000557490 LINC01590Q5TEZ4 76 aa13.53□□□□□ -0.24
TUBB3-214ENST00000557490 ZFP1Q6P2D0 407 aa13.53□□□□□ -0.24
TUBB3-214ENST00000557490 DCXRQ7Z4W1 244 aa13.53□□□□□ -0.24
TUBB3-214ENST00000557490 ERI1Q8IV48 349 aaKnown RBP13.53□□□□□ -0.24
TUBB3-214ENST00000557490 CPOQ8IVL8 374 aa13.53□□□□□ -0.24
TUBB3-214ENST00000557490 GTF3AQ92664 365 aaKnown RBP13.53□□□□□ -0.24
TUBB3-214ENST00000557490 INTS14Q96SY0 518 aa13.53□□□□□ -0.24
TUBB3-214ENST00000557490 PRRG3Q9BZD7 231 aa13.53□□□□□ -0.24
TUBB3-214ENST00000557490 BPESC1Q9GZL8 116 aa13.53□□□□□ -0.24
TUBB3-214ENST00000557490 PTTG3PQ9NZH4 202 aa13.53□□□□□ -0.24
TUBB3-214ENST00000557490 PURGQ9UJV8 347 aaKnown RBP13.53□□□□□ -0.24
TUBB3-214ENST00000557490 M0R135 149 aa13.52□□□□□ -0.25
TUBB3-214ENST00000557490 PRODHO43272 600 aa13.52□□□□□ -0.25
TUBB3-214ENST00000557490 MITFO75030 526 aaPredicted RBP13.52□□□□□ -0.25
TUBB3-214ENST00000557490 NCR1O76036 304 aa13.52□□□□□ -0.25
TUBB3-214ENST00000557490 LCATP04180 440 aa13.52□□□□□ -0.25
TUBB3-214ENST00000557490 RAC2P15153 192 aa13.52□□□□□ -0.25
TUBB3-214ENST00000557490 KITLGP21583 273 aa13.52□□□□□ -0.25
TUBB3-214ENST00000557490 ACHEP22303 614 aa13.52□□□□□ -0.25
TUBB3-214ENST00000557490 RPS7P62081 194 aaKnown RBP13.52□□□□□ -0.25
TUBB3-214ENST00000557490 EIF2B1Q14232 305 aaKnown RBP13.52□□□□□ -0.25
TUBB3-214ENST00000557490 PTGES3Q15185 160 aaKnown RBP13.52□□□□□ -0.25
TUBB3-214ENST00000557490 RSPO1Q2MKA7 263 aaPredicted RBP13.52□□□□□ -0.25
TUBB3-214ENST00000557490 TMEM255AQ5JRV8 349 aa13.52□□□□□ -0.25
TUBB3-214ENST00000557490 FAM209AQ5JX71 171 aa13.52□□□□□ -0.25
TUBB3-214ENST00000557490 KDM4DQ6B0I6 523 aa13.52□□□□□ -0.25
TUBB3-214ENST00000557490 SHFQ7M4L6 423 aa13.52□□□□□ -0.25
TUBB3-214ENST00000557490 OR6N2Q8NGY6 317 aa13.52□□□□□ -0.25
TUBB3-214ENST00000557490 HAVCR1Q96D42 359 aa13.52□□□□□ -0.25
TUBB3-214ENST00000557490 ZMYND19Q96E35 227 aaPredicted RBP13.52□□□□□ -0.25
TUBB3-214ENST00000557490 ZNF799Q96GE5 643 aa13.52□□□□□ -0.25
TUBB3-214ENST00000557490 DIRC2Q96SL1 478 aa13.52□□□□□ -0.25
TUBB3-214ENST00000557490 COPS4Q9BT78 406 aa13.52□□□□□ -0.25
TUBB3-214ENST00000557490 EGLN1Q9GZT9 426 aa13.52□□□□□ -0.25
TUBB3-214ENST00000557490 CHODLQ9H9P2 273 aa13.52□□□□□ -0.25
TUBB3-214ENST00000557490 CENPMQ9NSP4 180 aa13.52□□□□□ -0.25
TUBB3-214ENST00000557490 DDX28Q9NUL7 540 aaKnown RBP13.52□□□□□ -0.25
TUBB3-214ENST00000557490 ZDHHC8Q9ULC8 765 aa13.52□□□□□ -0.25
TUBB3-214ENST00000557490 ANK3Q12955 4377 aaKnown RBP13.52□□□□□ -0.25
TUBB3-214ENST00000557490 ZSCAN5BA6NJL1 495 aa13.51□□□□□ -0.25
TUBB3-214ENST00000557490 SAC3D1A6NKF1 404 aa13.51□□□□□ -0.25
TUBB3-214ENST00000557490 CRLF1O75462 422 aa13.51□□□□□ -0.25
TUBB3-214ENST00000557490 IGHV1-46P01743 117 aa13.51□□□□□ -0.25
TUBB3-214ENST00000557490 PSKH1P11801 424 aa13.51□□□□□ -0.25
TUBB3-214ENST00000557490 IGFBP5P24593 272 aa13.51□□□□□ -0.25
TUBB3-214ENST00000557490 COL8A2P25067 703 aa13.51□□□□□ -0.25
TUBB3-214ENST00000557490 SLC6A9P48067 706 aa13.51□□□□□ -0.25
TUBB3-214ENST00000557490 MALLQ13021 153 aa13.51□□□□□ -0.25
TUBB3-214ENST00000557490 RIN1Q13671 783 aa13.51□□□□□ -0.25
TUBB3-214ENST00000557490 HLXQ14774 488 aaPredicted RBP13.51□□□□□ -0.25
TUBB3-214ENST00000557490 TMEM249Q2WGJ8 235 aa13.51□□□□□ -0.25
TUBB3-214ENST00000557490 SLC35D3Q5M8T2 416 aa13.51□□□□□ -0.25
TUBB3-214ENST00000557490 FBXW12Q6X9E4 464 aa13.51□□□□□ -0.25
TUBB3-214ENST00000557490 COLCA1Q6ZS62 124 aa13.51□□□□□ -0.25
TUBB3-214ENST00000557490 DPY19L4Q7Z388 723 aa13.51□□□□□ -0.25
TUBB3-214ENST00000557490 OR10S1Q8NGN2 331 aa13.51□□□□□ -0.25
TUBB3-214ENST00000557490 SLAMF6Q96DU3 332 aa13.51□□□□□ -0.25
TUBB3-214ENST00000557490 OSBPL10Q9BXB5 764 aa13.51□□□□□ -0.25
TUBB3-214ENST00000557490 C1QTNF5Q9BXJ0 243 aa13.51□□□□□ -0.25
TUBB3-214ENST00000557490 MARCH7Q9H992 704 aa13.51□□□□□ -0.25
TUBB3-214ENST00000557490 SAP30LQ9HAJ7 183 aa13.51□□□□□ -0.25
TUBB3-214ENST00000557490 MSL2Q9HCI7 577 aa13.51□□□□□ -0.25
TUBB3-214ENST00000557490 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.51□□□□□ -0.25
TUBB3-214ENST00000557490 OAZ3Q9UMX2 235 aa13.51□□□□□ -0.25
TUBB3-214ENST00000557490 IGHV4-61A0A0C4DH41 118 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms