RNA–Protein interactions for RNA: ENST00000557487.5

SHMT2-232, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-232ENST00000557487 CCSO14618 274 aa14.56□□□□□ -0.08
SHMT2-232ENST00000557487 AHSA1O95433 338 aa14.56□□□□□ -0.08
SHMT2-232ENST00000557487 IGKV3-11P04433 115 aa14.56□□□□□ -0.08
SHMT2-232ENST00000557487 CTSEP14091 401 aa14.56□□□□□ -0.08
SHMT2-232ENST00000557487 BLKP51451 505 aa14.56□□□□□ -0.08
SHMT2-232ENST00000557487 MMP16P51512 607 aa14.56□□□□□ -0.08
SHMT2-232ENST00000557487 SLC26A5P58743 744 aa14.56□□□□□ -0.08
SHMT2-232ENST00000557487 S100A12P80511 92 aa14.56□□□□□ -0.08
SHMT2-232ENST00000557487 NKPD1Q17RQ9 610 aa14.56□□□□□ -0.08
SHMT2-232ENST00000557487 C1orf140Q5VVS0 124 aa14.56□□□□□ -0.08
SHMT2-232ENST00000557487 GRINAQ7Z429 371 aa14.56□□□□□ -0.08
SHMT2-232ENST00000557487 CD163Q86VB7 1156 aa14.56□□□□□ -0.08
SHMT2-232ENST00000557487 PUSL1Q8N0Z8 303 aaKnown RBP14.56□□□□□ -0.08
SHMT2-232ENST00000557487 SLC22A18ASQ8N1D0 253 aa14.56□□□□□ -0.08
SHMT2-232ENST00000557487 ACBD4Q8NC06 268 aa14.56□□□□□ -0.08
SHMT2-232ENST00000557487 PPP1R14AQ96A00 147 aa14.56□□□□□ -0.08
SHMT2-232ENST00000557487 SLC25A36Q96CQ1 311 aa14.56□□□□□ -0.08
SHMT2-232ENST00000557487 CNTNAP3BQ96NU0 1288 aa14.56□□□□□ -0.08
SHMT2-232ENST00000557487 SCGB3A2Q96PL1 93 aa14.56□□□□□ -0.08
SHMT2-232ENST00000557487 SAV1Q9H4B6 383 aaPredicted RBP14.56□□□□□ -0.08
SHMT2-232ENST00000557487 UCK1Q9HA47 277 aa14.56□□□□□ -0.08
SHMT2-232ENST00000557487 TMED7Q9Y3B3 224 aa14.56□□□□□ -0.08
SHMT2-232ENST00000557487 FAM25EA8MYX2 175 aa14.56□□□□□ -0.08
SHMT2-232ENST00000557487 ERCC1P07992 297 aaPredicted RBP14.56□□□□□ -0.08
SHMT2-232ENST00000557487 CHRM2P08172 466 aa14.56□□□□□ -0.08
SHMT2-232ENST00000557487 PVALBP20472 110 aaPredicted RBP14.56□□□□□ -0.08
SHMT2-232ENST00000557487 GABRA4P48169 554 aa14.56□□□□□ -0.08
SHMT2-232ENST00000557487 EIF5AP63241 154 aaKnown RBP14.56□□□□□ -0.08
SHMT2-232ENST00000557487 ZP4Q12836 540 aa14.56□□□□□ -0.08
SHMT2-232ENST00000557487 AIMP2Q13155 320 aaKnown RBP14.56□□□□□ -0.08
SHMT2-232ENST00000557487 ATXN7L3Q14CW9 347 aaPredicted RBP14.56□□□□□ -0.08
SHMT2-232ENST00000557487 STK11Q15831 433 aa14.56□□□□□ -0.08
SHMT2-232ENST00000557487 PARGQ86W56 976 aa14.56□□□□□ -0.08
SHMT2-232ENST00000557487 ZNF761Q86XN6 746 aaPredicted RBP14.56□□□□□ -0.08
SHMT2-232ENST00000557487 SLC26A10Q8NG04 563 aa14.56□□□□□ -0.08
SHMT2-232ENST00000557487 OR4S1Q8NGB4 309 aa14.56□□□□□ -0.08
SHMT2-232ENST00000557487 OR4D6Q8NGJ1 314 aa14.56□□□□□ -0.08
SHMT2-232ENST00000557487 SEC11CQ9BY50 192 aa14.56□□□□□ -0.08
SHMT2-232ENST00000557487 TBL1XR1Q9BZK7 514 aa14.56□□□□□ -0.08
SHMT2-232ENST00000557487 TCEAL2Q9H3H9 227 aaPredicted RBP14.56□□□□□ -0.08
SHMT2-232ENST00000557487 PNO1Q9NRX1 252 aaKnown RBP14.56□□□□□ -0.08
SHMT2-232ENST00000557487 SPTY2D1-AS1A0A0U1RR47 76 aa14.55□□□□□ -0.08
SHMT2-232ENST00000557487 TMEM269A0A1B0GVZ9 245 aa14.55□□□□□ -0.08
SHMT2-232ENST00000557487 PQLC2LA1A4F0 135 aa14.55□□□□□ -0.08
SHMT2-232ENST00000557487 CEACAM18A8MTB9 384 aa14.55□□□□□ -0.08
SHMT2-232ENST00000557487 PLGP00747 810 aaPredicted RBP14.55□□□□□ -0.08
SHMT2-232ENST00000557487 HEXAP06865 529 aa14.55□□□□□ -0.08
SHMT2-232ENST00000557487 LYL1P12980 280 aa14.55□□□□□ -0.08
SHMT2-232ENST00000557487 CD1CP29017 333 aa14.55□□□□□ -0.08
SHMT2-232ENST00000557487 CCR5P51681 352 aa14.55□□□□□ -0.08
SHMT2-232ENST00000557487 GPR85P60893 370 aa14.55□□□□□ -0.08
SHMT2-232ENST00000557487 QRFPP83859 136 aa14.55□□□□□ -0.08
SHMT2-232ENST00000557487 BEX5Q5H9J7 111 aa14.55□□□□□ -0.08
SHMT2-232ENST00000557487 NKAPLQ5M9Q1 402 aa14.55□□□□□ -0.08
SHMT2-232ENST00000557487 HOGA1Q86XE5 327 aa14.55□□□□□ -0.08
SHMT2-232ENST00000557487 LDLRAD3Q86YD5 345 aa14.55□□□□□ -0.08
SHMT2-232ENST00000557487 MRGPRFQ96AM1 343 aa14.55□□□□□ -0.08
SHMT2-232ENST00000557487 SAT2Q96F10 170 aaPredicted RBP14.55□□□□□ -0.08
SHMT2-232ENST00000557487 ZMAT3Q9HA38 289 aaKnown RBP14.55□□□□□ -0.08
SHMT2-232ENST00000557487 BIN3Q9NQY0 253 aa14.55□□□□□ -0.08
SHMT2-232ENST00000557487 LANCL2Q9NS86 450 aa14.55□□□□□ -0.08
SHMT2-232ENST00000557487 ANAPC10Q9UM13 185 aa14.55□□□□□ -0.08
SHMT2-232ENST00000557487 SLC5A6Q9Y289 635 aa14.55□□□□□ -0.08
SHMT2-232ENST00000557487 DOCK8Q8NF50 2099 aa14.55□□□□□ -0.08
SHMT2-232ENST00000557487 C5orf51A6NDU8 294 aa14.54□□□□□ -0.08
SHMT2-232ENST00000557487 DLL1O00548 723 aa14.54□□□□□ -0.08
SHMT2-232ENST00000557487 FADS1O60427 444 aa14.54□□□□□ -0.08
SHMT2-232ENST00000557487 TSPAN2O60636 221 aa14.54□□□□□ -0.08
SHMT2-232ENST00000557487 SEMA4FO95754 770 aa14.54□□□□□ -0.08
SHMT2-232ENST00000557487 NUDT14O95848 222 aa14.54□□□□□ -0.08
SHMT2-232ENST00000557487 CSN2P05814 226 aa14.54□□□□□ -0.08
SHMT2-232ENST00000557487 VAMP1P23763 118 aa14.54□□□□□ -0.08
SHMT2-232ENST00000557487 CTHP32929 405 aa14.54□□□□□ -0.08
SHMT2-232ENST00000557487 SLC6A9P48067 706 aa14.54□□□□□ -0.08
SHMT2-232ENST00000557487 DAP3P51398 398 aaKnown RBP14.54□□□□□ -0.08
SHMT2-232ENST00000557487 TDGQ13569 410 aa14.54□□□□□ -0.08
SHMT2-232ENST00000557487 ELAVL1Q15717 326 aaKnown RBP14.54□□□□□ -0.08
SHMT2-232ENST00000557487 C1QL3Q5VWW1 255 aa14.54□□□□□ -0.08
SHMT2-232ENST00000557487 HLA-DQA1Q5Y7H0 255 aa14.54□□□□□ -0.08
SHMT2-232ENST00000557487 ARRDC1Q8N5I2 433 aa14.54□□□□□ -0.08
SHMT2-232ENST00000557487 CHST4Q8NCG5 386 aa14.54□□□□□ -0.08
SHMT2-232ENST00000557487 ST7LQ8TDW4 575 aa14.54□□□□□ -0.08
SHMT2-232ENST00000557487 OR8D2Q9GZM6 311 aa14.54□□□□□ -0.08
SHMT2-232ENST00000557487 CNTD2Q9H8S5 307 aa14.54□□□□□ -0.08
SHMT2-232ENST00000557487 RAB18Q9NP72 206 aa14.54□□□□□ -0.08
SHMT2-232ENST00000557487 COA3Q9Y2R0 106 aaPredicted RBP14.54□□□□□ -0.08
SHMT2-232ENST00000557487 CSAG2Q9Y5P2 127 aa14.54□□□□□ -0.08
SHMT2-232ENST00000557487 OR2W5A6NFC9 320 aa14.54□□□□□ -0.08
SHMT2-232ENST00000557487 ZNF98A6NK75 572 aa14.54□□□□□ -0.08
SHMT2-232ENST00000557487 GPR31O00270 319 aa14.54□□□□□ -0.08
SHMT2-232ENST00000557487 GSTP1P09211 210 aaKnown RBP14.54□□□□□ -0.08
SHMT2-232ENST00000557487 PGAM2P15259 253 aa14.54□□□□□ -0.08
SHMT2-232ENST00000557487 DRD1P21728 446 aa14.54□□□□□ -0.08
SHMT2-232ENST00000557487 AVPR2P30518 371 aa14.54□□□□□ -0.08
SHMT2-232ENST00000557487 HRH1P35367 487 aa14.54□□□□□ -0.08
SHMT2-232ENST00000557487 RFC3P40938 356 aa14.54□□□□□ -0.08
SHMT2-232ENST00000557487 CAPZBP47756 277 aa14.54□□□□□ -0.08
SHMT2-232ENST00000557487 PNLIPRP2P54317 469 aa14.54□□□□□ -0.08
SHMT2-232ENST00000557487 TMEM128Q5BJH2 165 aa14.54□□□□□ -0.08
SHMT2-232ENST00000557487 VAX1Q5SQQ9 334 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms