RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 CTSZQ9UBR2 303 aa11.72□□□□□ -0.53
SLIRP-210ENST00000557431 CLN8Q9UBY8 286 aa11.72□□□□□ -0.53
SLIRP-210ENST00000557431 LHFPL6Q9Y693 200 aa11.72□□□□□ -0.53
SLIRP-210ENST00000557431 ELOVL7A1L3X0 281 aa11.71□□□□□ -0.53
SLIRP-210ENST00000557431 IQCF6A8MYZ5 107 aa11.71□□□□□ -0.53
SLIRP-210ENST00000557431 FAM20BO75063 409 aa11.71□□□□□ -0.53
SLIRP-210ENST00000557431 KHDRBS3O75525 346 aaKnown RBP11.71□□□□□ -0.53
SLIRP-210ENST00000557431 IFNW1P05000 195 aa11.71□□□□□ -0.53
SLIRP-210ENST00000557431 MELTFP08582 738 aa11.71□□□□□ -0.53
SLIRP-210ENST00000557431 FPR3P25089 353 aa11.71□□□□□ -0.53
SLIRP-210ENST00000557431 FXYD6P3P58550 94 aa11.71□□□□□ -0.53
SLIRP-210ENST00000557431 MAB21L1Q13394 359 aa11.71□□□□□ -0.53
SLIRP-210ENST00000557431 MPPED2Q15777 294 aa11.71□□□□□ -0.53
SLIRP-210ENST00000557431 GPR157Q5UAW9 335 aa11.71□□□□□ -0.53
SLIRP-210ENST00000557431 OLFML2AQ68BL7 652 aa11.71□□□□□ -0.53
SLIRP-210ENST00000557431 SFRP4Q6FHJ7 346 aaPredicted RBP11.71□□□□□ -0.53
SLIRP-210ENST00000557431 CGB2Q6NT52 195 aa11.71□□□□□ -0.53
SLIRP-210ENST00000557431 FBXW12Q6X9E4 464 aa11.71□□□□□ -0.53
SLIRP-210ENST00000557431 ZNF841Q6ZN19 808 aa11.71□□□□□ -0.53
SLIRP-210ENST00000557431 MBOAT2Q6ZWT7 520 aa11.71□□□□□ -0.53
SLIRP-210ENST00000557431 TSEN54Q7Z6J9 526 aaKnown RBP11.71□□□□□ -0.53
SLIRP-210ENST00000557431 NAA40Q86UY6 237 aa11.71□□□□□ -0.53
SLIRP-210ENST00000557431 PDZD9Q8IXQ8 264 aa11.71□□□□□ -0.53
SLIRP-210ENST00000557431 ACOT11Q8WXI4 607 aaPredicted RBP11.71□□□□□ -0.53
SLIRP-210ENST00000557431 PLEKHA8Q96JA3 519 aa11.71□□□□□ -0.53
SLIRP-210ENST00000557431 ZNF582Q96NG8 517 aaPredicted RBP11.71□□□□□ -0.53
SLIRP-210ENST00000557431 TECTBQ96PL2 329 aa11.71□□□□□ -0.53
SLIRP-210ENST00000557431 TBX15Q96SF7 602 aa11.71□□□□□ -0.53
SLIRP-210ENST00000557431 PKP2Q99959 881 aa11.71□□□□□ -0.53
SLIRP-210ENST00000557431 SH3GL1Q99961 368 aa11.71□□□□□ -0.53
SLIRP-210ENST00000557431 RASSF4Q9H2L5 321 aa11.71□□□□□ -0.53
SLIRP-210ENST00000557431 MMADHCQ9H3L0 296 aaPredicted RBP11.71□□□□□ -0.53
SLIRP-210ENST00000557431 CMTM6Q9NX76 183 aa11.71□□□□□ -0.53
SLIRP-210ENST00000557431 MMP24Q9Y5R2 645 aa11.71□□□□□ -0.53
SLIRP-210ENST00000557431 IER3IP1Q9Y5U9 82 aa11.71□□□□□ -0.53
SLIRP-210ENST00000557431 CRYBA1P05813 215 aa11.7□□□□□ -0.54
SLIRP-210ENST00000557431 PPIAL4GP0DN37 164 aa11.7□□□□□ -0.54
SLIRP-210ENST00000557431 IFNA8P32881 189 aa11.7□□□□□ -0.54
SLIRP-210ENST00000557431 MDH1P40925 334 aaKnown RBP11.7□□□□□ -0.54
SLIRP-210ENST00000557431 CDKN2AP42771 156 aaKnown RBP11.7□□□□□ -0.54
SLIRP-210ENST00000557431 PRB3Q04118 309 aaPredicted RBP11.7□□□□□ -0.54
SLIRP-210ENST00000557431 RSPO1Q2MKA7 263 aaPredicted RBP11.7□□□□□ -0.54
SLIRP-210ENST00000557431 CLEC12AQ5QGZ9 265 aa11.7□□□□□ -0.54
SLIRP-210ENST00000557431 HIST2H2BDQ6DRA6 164 aa11.7□□□□□ -0.54
SLIRP-210ENST00000557431 Q6YL49 198 aa11.7□□□□□ -0.54
SLIRP-210ENST00000557431 FGFRL1Q8N441 504 aa11.7□□□□□ -0.54
SLIRP-210ENST00000557431 PCYOX1LQ8NBM8 494 aa11.7□□□□□ -0.54
SLIRP-210ENST00000557431 APOBEC3DQ96AK3 386 aaPredicted RBP11.7□□□□□ -0.54
SLIRP-210ENST00000557431 RCN3Q96D15 328 aa11.7□□□□□ -0.54
SLIRP-210ENST00000557431 HSH2DQ96JZ2 352 aa11.7□□□□□ -0.54
SLIRP-210ENST00000557431 CITED1Q99966 193 aa11.7□□□□□ -0.54
SLIRP-210ENST00000557431 BEX1Q9HBH7 125 aa11.7□□□□□ -0.54
SLIRP-210ENST00000557431 SMURF1Q9HCE7 757 aa11.7□□□□□ -0.54
SLIRP-210ENST00000557431 FCN3O75636 299 aa11.69□□□□□ -0.54
SLIRP-210ENST00000557431 PPP1R3DO95685 299 aa11.69□□□□□ -0.54
SLIRP-210ENST00000557431 TSPAN15O95858 294 aa11.69□□□□□ -0.54
SLIRP-210ENST00000557431 TUBG1P23258 451 aa11.69□□□□□ -0.54
SLIRP-210ENST00000557431 SDHAP31040 664 aa11.69□□□□□ -0.54
SLIRP-210ENST00000557431 CFHR2P36980 270 aa11.69□□□□□ -0.54
SLIRP-210ENST00000557431 LSM6P62312 80 aaKnown RBP11.69□□□□□ -0.54
SLIRP-210ENST00000557431 POU4F2Q12837 409 aa11.69□□□□□ -0.54
SLIRP-210ENST00000557431 IFI44LQ53G44 452 aa11.69□□□□□ -0.54
SLIRP-210ENST00000557431 ASPHD2Q6ICH7 369 aa11.69□□□□□ -0.54
SLIRP-210ENST00000557431 CFAP77Q6ZQR2 320 aa11.69□□□□□ -0.54
SLIRP-210ENST00000557431 DCDC5Q6ZRR9 648 aa11.69□□□□□ -0.54
SLIRP-210ENST00000557431 TMPRSS11FQ6ZWK6 438 aa11.69□□□□□ -0.54
SLIRP-210ENST00000557431 NLRC3Q7RTR2 1065 aa11.69□□□□□ -0.54
SLIRP-210ENST00000557431 GLB1L2Q8IW92 636 aa11.69□□□□□ -0.54
SLIRP-210ENST00000557431 OR4F5Q8NH21 305 aa11.69□□□□□ -0.54
SLIRP-210ENST00000557431 COG8Q96MW5 612 aa11.69□□□□□ -0.54
SLIRP-210ENST00000557431 WACQ9BTA9 647 aa11.69□□□□□ -0.54
SLIRP-210ENST00000557431 FN3KQ9H479 309 aa11.69□□□□□ -0.54
SLIRP-210ENST00000557431 PRDM13Q9H4Q3 707 aa11.69□□□□□ -0.54
SLIRP-210ENST00000557431 NMNAT1Q9HAN9 279 aaPredicted RBP11.69□□□□□ -0.54
SLIRP-210ENST00000557431 SAR1AQ9NR31 198 aa11.69□□□□□ -0.54
SLIRP-210ENST00000557431 TUBG2Q9NRH3 451 aa11.69□□□□□ -0.54
SLIRP-210ENST00000557431 TMEM100Q9NV29 134 aa11.69□□□□□ -0.54
SLIRP-210ENST00000557431 VSX1Q9NZR4 365 aaPredicted RBP11.69□□□□□ -0.54
SLIRP-210ENST00000557431 SIGLEC7Q9Y286 467 aa11.69□□□□□ -0.54
SLIRP-210ENST00000557431 A0A0G2JK05 382 aa11.68□□□□□ -0.54
SLIRP-210ENST00000557431 CENPVL3A0A0U1RRI6 287 aa11.68□□□□□ -0.54
SLIRP-210ENST00000557431 CLPSL1A2RUU4 121 aa11.68□□□□□ -0.54
SLIRP-210ENST00000557431 C5orf63A6NC05 138 aa11.68□□□□□ -0.54
SLIRP-210ENST00000557431 LRRC30A6NM36 301 aa11.68□□□□□ -0.54
SLIRP-210ENST00000557431 C3orf80F5H4A9 247 aa11.68□□□□□ -0.54
SLIRP-210ENST00000557431 F5H5K5 113 aa11.68□□□□□ -0.54
SLIRP-210ENST00000557431 IFNL4K9M1U5 179 aa11.68□□□□□ -0.54
SLIRP-210ENST00000557431 CXCR6O00574 342 aa11.68□□□□□ -0.54
SLIRP-210ENST00000557431 PTP4A3O75365 173 aa11.68□□□□□ -0.54
SLIRP-210ENST00000557431 DIRAS1O95057 198 aa11.68□□□□□ -0.54
SLIRP-210ENST00000557431 NDUFB2O95178 105 aa11.68□□□□□ -0.54
SLIRP-210ENST00000557431 IGHV4-59P01825 116 aa11.68□□□□□ -0.54
SLIRP-210ENST00000557431 IRF2P14316 349 aa11.68□□□□□ -0.54
SLIRP-210ENST00000557431 MMP9P14780 707 aa11.68□□□□□ -0.54
SLIRP-210ENST00000557431 NCK1P16333 377 aa11.68□□□□□ -0.54
SLIRP-210ENST00000557431 RGS6P49758 472 aa11.68□□□□□ -0.54
SLIRP-210ENST00000557431 HIST1H3AP68431 136 aa11.68□□□□□ -0.54
SLIRP-210ENST00000557431 ELF3P78545 371 aaPredicted RBP11.68□□□□□ -0.54
SLIRP-210ENST00000557431 GK2Q14410 553 aaPredicted RBP11.68□□□□□ -0.54
SLIRP-210ENST00000557431 ZNF181Q2M3W8 571 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms