RNA–Protein interactions for RNA: ENST00000556833.1

CHD8-211, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-211ENST00000556833 PPP1R3DO95685 299 aa12.32□□□□□ -0.44
CHD8-211ENST00000556833 KNG1P01042 644 aa12.32□□□□□ -0.44
CHD8-211ENST00000556833 TROVE2P10155 538 aaKnown RBP eCLIP12.32□□□□□ -0.44
CHD8-211ENST00000556833 FPR3P25089 353 aa12.32□□□□□ -0.44
CHD8-211ENST00000556833 SDHAP31040 664 aa12.32□□□□□ -0.44
CHD8-211ENST00000556833 CDKN2AP42771 156 aaKnown RBP12.32□□□□□ -0.44
CHD8-211ENST00000556833 ZNF404Q494X3 552 aa12.32□□□□□ -0.44
CHD8-211ENST00000556833 COQ5Q5HYK3 327 aa12.32□□□□□ -0.44
CHD8-211ENST00000556833 SFRP4Q6FHJ7 346 aaPredicted RBP12.32□□□□□ -0.44
CHD8-211ENST00000556833 FBXW12Q6X9E4 464 aa12.32□□□□□ -0.44
CHD8-211ENST00000556833 NLRC3Q7RTR2 1065 aa12.32□□□□□ -0.44
CHD8-211ENST00000556833 FITM2Q8N6M3 262 aa12.32□□□□□ -0.44
CHD8-211ENST00000556833 OR5L1Q8NGL2 311 aa12.32□□□□□ -0.44
CHD8-211ENST00000556833 APOBEC3DQ96AK3 386 aaPredicted RBP12.32□□□□□ -0.44
CHD8-211ENST00000556833 RSRC1Q96IZ7 334 aaKnown RBP12.32□□□□□ -0.44
CHD8-211ENST00000556833 COG8Q96MW5 612 aa12.32□□□□□ -0.44
CHD8-211ENST00000556833 SLC30A2Q9BRI3 323 aa12.32□□□□□ -0.44
CHD8-211ENST00000556833 FN3KQ9H479 309 aa12.32□□□□□ -0.44
CHD8-211ENST00000556833 NMNAT1Q9HAN9 279 aaPredicted RBP12.32□□□□□ -0.44
CHD8-211ENST00000556833 CAPN7Q9Y6W3 813 aa12.32□□□□□ -0.44
CHD8-211ENST00000556833 LRRC30A6NM36 301 aa12.31□□□□□ -0.44
CHD8-211ENST00000556833 POM121CA8CG34 1229 aa12.31□□□□□ -0.44
CHD8-211ENST00000556833 F5H5K5 113 aa12.31□□□□□ -0.44
CHD8-211ENST00000556833 CLDN34H7C241 214 aa12.31□□□□□ -0.44
CHD8-211ENST00000556833 FAM20BO75063 409 aa12.31□□□□□ -0.44
CHD8-211ENST00000556833 CRYBA1P05813 215 aa12.31□□□□□ -0.44
CHD8-211ENST00000556833 IRF2P14316 349 aa12.31□□□□□ -0.44
CHD8-211ENST00000556833 TUBG1P23258 451 aa12.31□□□□□ -0.44
CHD8-211ENST00000556833 RGS6P49758 472 aa12.31□□□□□ -0.44
CHD8-211ENST00000556833 SLC7A2P52569 658 aa12.31□□□□□ -0.44
CHD8-211ENST00000556833 RAG2P55895 527 aa12.31□□□□□ -0.44
CHD8-211ENST00000556833 FXYD6P3P58550 94 aa12.31□□□□□ -0.44
CHD8-211ENST00000556833 LSM6P62312 80 aaKnown RBP12.31□□□□□ -0.44
CHD8-211ENST00000556833 MPPED2Q15777 294 aa12.31□□□□□ -0.44
CHD8-211ENST00000556833 ANKDD1AQ495B1 522 aa12.31□□□□□ -0.44
CHD8-211ENST00000556833 GPR157Q5UAW9 335 aa12.31□□□□□ -0.44
CHD8-211ENST00000556833 WDR25Q64LD2 544 aaPredicted RBP12.31□□□□□ -0.44
CHD8-211ENST00000556833 BRICD5Q6PL45 260 aa12.31□□□□□ -0.44
CHD8-211ENST00000556833 CFAP77Q6ZQR2 320 aa12.31□□□□□ -0.44
CHD8-211ENST00000556833 C17orf107Q6ZR85 190 aa12.31□□□□□ -0.44
CHD8-211ENST00000556833 C9orf139Q6ZV77 190 aa12.31□□□□□ -0.44
CHD8-211ENST00000556833 TMPRSS11FQ6ZWK6 438 aa12.31□□□□□ -0.44
CHD8-211ENST00000556833 TSEN54Q7Z6J9 526 aaKnown RBP12.31□□□□□ -0.44
CHD8-211ENST00000556833 NAA40Q86UY6 237 aa12.31□□□□□ -0.44
CHD8-211ENST00000556833 PDZD9Q8IXQ8 264 aa12.31□□□□□ -0.44
CHD8-211ENST00000556833 SLC15A3Q8IY34 581 aa12.31□□□□□ -0.44
CHD8-211ENST00000556833 RNF113BQ8IZP6 322 aaKnown RBP12.31□□□□□ -0.44
CHD8-211ENST00000556833 OR52J3Q8NH60 311 aa12.31□□□□□ -0.44
CHD8-211ENST00000556833 SLC7A13Q8TCU3 470 aa12.31□□□□□ -0.44
CHD8-211ENST00000556833 WFDC12Q8WWY7 111 aa12.31□□□□□ -0.44
CHD8-211ENST00000556833 FAM162AQ96A26 154 aa12.31□□□□□ -0.44
CHD8-211ENST00000556833 DACT3Q96B18 629 aaPredicted RBP12.31□□□□□ -0.44
CHD8-211ENST00000556833 CCT8L2Q96SF2 557 aa12.31□□□□□ -0.44
CHD8-211ENST00000556833 CHIAQ9BZP6 476 aa12.31□□□□□ -0.44
CHD8-211ENST00000556833 NDEL1Q9GZM8 345 aa12.31□□□□□ -0.44
CHD8-211ENST00000556833 SRA1Q9HD15 236 aaKnown RBP12.31□□□□□ -0.44
CHD8-211ENST00000556833 TUBG2Q9NRH3 451 aa12.31□□□□□ -0.44
CHD8-211ENST00000556833 TMEM100Q9NV29 134 aa12.31□□□□□ -0.44
CHD8-211ENST00000556833 VSX1Q9NZR4 365 aaPredicted RBP12.31□□□□□ -0.44
CHD8-211ENST00000556833 SIGLEC7Q9Y286 467 aa12.31□□□□□ -0.44
CHD8-211ENST00000556833 V9GYQ6 96 aa12.31□□□□□ -0.44
CHD8-211ENST00000556833 PRKDCP78527 4128 aaKnown RBP12.3□□□□□ -0.44
CHD8-211ENST00000556833 TRBV4-1A0A0J9YWV2 114 aa12.3□□□□□ -0.44
CHD8-211ENST00000556833 KIR2DS1A0A191URI9 304 aa12.3□□□□□ -0.44
CHD8-211ENST00000556833 HTR3EA5X5Y0 456 aa12.3□□□□□ -0.44
CHD8-211ENST00000556833 IQCF6A8MYZ5 107 aa12.3□□□□□ -0.44
CHD8-211ENST00000556833 C3orf80F5H4A9 247 aa12.3□□□□□ -0.44
CHD8-211ENST00000556833 NME4O00746 187 aa12.3□□□□□ -0.44
CHD8-211ENST00000556833 NPPAP01160 153 aa12.3□□□□□ -0.44
CHD8-211ENST00000556833 RELBQ01201 579 aa12.3□□□□□ -0.44
CHD8-211ENST00000556833 MAB21L1Q13394 359 aa12.3□□□□□ -0.44
CHD8-211ENST00000556833 SEC23BQ15437 767 aa12.3□□□□□ -0.44
CHD8-211ENST00000556833 CBLL1Q75N03 491 aa12.3□□□□□ -0.44
CHD8-211ENST00000556833 CYP4Z1Q86W10 505 aa12.3□□□□□ -0.44
CHD8-211ENST00000556833 C1orf87Q8N0U7 546 aa12.3□□□□□ -0.44
CHD8-211ENST00000556833 LNX2Q8N448 690 aa12.3□□□□□ -0.44
CHD8-211ENST00000556833 SLCO4A1Q96BD0 722 aa12.3□□□□□ -0.44
CHD8-211ENST00000556833 WACQ9BTA9 647 aa12.3□□□□□ -0.44
CHD8-211ENST00000556833 HCAR1Q9BXC0 346 aa12.3□□□□□ -0.44
CHD8-211ENST00000556833 SLITRK2Q9H156 845 aa12.3□□□□□ -0.44
CHD8-211ENST00000556833 RASSF4Q9H2L5 321 aa12.3□□□□□ -0.44
CHD8-211ENST00000556833 CTSZQ9UBR2 303 aa12.3□□□□□ -0.44
CHD8-211ENST00000556833 AURKCQ9UQB9 309 aa12.3□□□□□ -0.44
CHD8-211ENST00000556833 TMEM5Q9Y2B1 443 aa12.3□□□□□ -0.44
CHD8-211ENST00000556833 UNC119BA6NIH7 251 aa12.29□□□□□ -0.44
CHD8-211ENST00000556833 SRRM5B3KS81 715 aa12.29□□□□□ -0.44
CHD8-211ENST00000556833 IFNL4K9M1U5 179 aa12.29□□□□□ -0.44
CHD8-211ENST00000556833 PTP4A3O75365 173 aa12.29□□□□□ -0.44
CHD8-211ENST00000556833 LCATP04180 440 aa12.29□□□□□ -0.44
CHD8-211ENST00000556833 H1F0P07305 194 aaKnown RBP12.29□□□□□ -0.44
CHD8-211ENST00000556833 ANOS1P23352 680 aa12.29□□□□□ -0.44
CHD8-211ENST00000556833 OMPP47874 163 aa12.29□□□□□ -0.44
CHD8-211ENST00000556833 GSK3BP49841 420 aa12.29□□□□□ -0.44
CHD8-211ENST00000556833 POU4F2Q12837 409 aa12.29□□□□□ -0.44
CHD8-211ENST00000556833 GK2Q14410 553 aaPredicted RBP12.29□□□□□ -0.44
CHD8-211ENST00000556833 RSPO1Q2MKA7 263 aaPredicted RBP12.29□□□□□ -0.44
CHD8-211ENST00000556833 GPR139Q6DWJ6 353 aa12.29□□□□□ -0.44
CHD8-211ENST00000556833 HDXQ7Z353 690 aa12.29□□□□□ -0.44
CHD8-211ENST00000556833 GJC3Q8NFK1 279 aa12.29□□□□□ -0.44
CHD8-211ENST00000556833 FANK1Q8TC84 345 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms