RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 OR4D10Q8NGI6 311 aa4.09□□□□□ -1.75
HIF1A-209ENST00000556827 OR2V1Q8NHB1 315 aa4.09□□□□□ -1.75
HIF1A-209ENST00000556827 C16orf78Q8WTQ4 265 aa4.09□□□□□ -1.75
HIF1A-209ENST00000556827 CPNE4Q96A23 557 aaPredicted RBP4.09□□□□□ -1.75
HIF1A-209ENST00000556827 S100PBPQ96BU1 408 aa4.09□□□□□ -1.75
HIF1A-209ENST00000556827 ANKRA2Q9H9E1 313 aa4.09□□□□□ -1.75
HIF1A-209ENST00000556827 UBQLN4Q9NRR5 601 aa4.09□□□□□ -1.75
HIF1A-209ENST00000556827 MGAT4BQ9UQ53 548 aa4.09□□□□□ -1.75
HIF1A-209ENST00000556827 CACNA1CQ13936 2221 aa4.09□□□□□ -1.76
HIF1A-209ENST00000556827 IGLV3-32A0A0A0MS00 114 aa4.08□□□□□ -1.76
HIF1A-209ENST00000556827 CCT8L1PA6NM43 557 aa4.08□□□□□ -1.76
HIF1A-209ENST00000556827 H3BQF6 201 aa4.08□□□□□ -1.76
HIF1A-209ENST00000556827 UPK1AO00322 258 aa4.08□□□□□ -1.76
HIF1A-209ENST00000556827 RAD51CO43502 376 aa4.08□□□□□ -1.76
HIF1A-209ENST00000556827 NME6O75414 186 aaPredicted RBP4.08□□□□□ -1.76
HIF1A-209ENST00000556827 OR4F21O95013 312 aa4.08□□□□□ -1.76
HIF1A-209ENST00000556827 OPN1LWP04000 364 aa4.08□□□□□ -1.76
HIF1A-209ENST00000556827 SOD3P08294 240 aa4.08□□□□□ -1.76
HIF1A-209ENST00000556827 RPS17P08708 135 aaKnown RBP4.08□□□□□ -1.76
HIF1A-209ENST00000556827 SNRPAP09012 282 aaKnown RBP4.08□□□□□ -1.76
HIF1A-209ENST00000556827 ALOX5P09917 674 aa4.08□□□□□ -1.76
HIF1A-209ENST00000556827 PRPS2P11908 318 aa4.08□□□□□ -1.76
HIF1A-209ENST00000556827 SLC25A16P16260 332 aa4.08□□□□□ -1.76
HIF1A-209ENST00000556827 TSPAN8P19075 237 aa4.08□□□□□ -1.76
HIF1A-209ENST00000556827 LOXP28300 417 aaPredicted RBP4.08□□□□□ -1.76
HIF1A-209ENST00000556827 ELK4P28324 431 aa4.08□□□□□ -1.76
HIF1A-209ENST00000556827 AGTR1P30556 359 aa4.08□□□□□ -1.76
HIF1A-209ENST00000556827 CASQ1P31415 396 aa4.08□□□□□ -1.76
HIF1A-209ENST00000556827 SLC6A8P48029 635 aa4.08□□□□□ -1.76
HIF1A-209ENST00000556827 CASP9P55211 416 aa4.08□□□□□ -1.76
HIF1A-209ENST00000556827 DSCR10P59022 87 aa4.08□□□□□ -1.76
HIF1A-209ENST00000556827 NAA20P61599 178 aa4.08□□□□□ -1.76
HIF1A-209ENST00000556827 BSPH1Q075Z2 132 aa4.08□□□□□ -1.76
HIF1A-209ENST00000556827 SCN1BQ07699 218 aa4.08□□□□□ -1.76
HIF1A-209ENST00000556827 LCP2Q13094 533 aa4.08□□□□□ -1.76
HIF1A-209ENST00000556827 PPA1Q15181 289 aa4.08□□□□□ -1.76
HIF1A-209ENST00000556827 GUSBP1Q15486 140 aa4.08□□□□□ -1.76
HIF1A-209ENST00000556827 TMEM176BQ3YBM2 270 aaPredicted RBP4.08□□□□□ -1.76
HIF1A-209ENST00000556827 LRRC37A5PQ49AS3 106 aa4.08□□□□□ -1.76
HIF1A-209ENST00000556827 PAQR6Q6TCH4 344 aa4.08□□□□□ -1.76
HIF1A-209ENST00000556827 Q6ZT83 130 aa4.08□□□□□ -1.76
HIF1A-209ENST00000556827 BHLHA15Q7RTS1 189 aaPredicted RBP4.08□□□□□ -1.76
HIF1A-209ENST00000556827 GALNT10Q86SR1 603 aa4.08□□□□□ -1.76
HIF1A-209ENST00000556827 LCA5Q86VQ0 697 aa4.08□□□□□ -1.76
HIF1A-209ENST00000556827 SLC22A9Q8IVM8 553 aa4.08□□□□□ -1.76
HIF1A-209ENST00000556827 SPAG16Q8N0X2 631 aa4.08□□□□□ -1.76
HIF1A-209ENST00000556827 OR8H3Q8N146 312 aa4.08□□□□□ -1.76
HIF1A-209ENST00000556827 UBE2J2Q8N2K1 259 aa4.08□□□□□ -1.76
HIF1A-209ENST00000556827 OR2L13Q8N349 312 aa4.08□□□□□ -1.76
HIF1A-209ENST00000556827 CDRT4Q8N9R6 151 aa4.08□□□□□ -1.76
HIF1A-209ENST00000556827 NHLRC2Q8NBF2 726 aa4.08□□□□□ -1.76
HIF1A-209ENST00000556827 RAB3IL1Q8TBN0 382 aa4.08□□□□□ -1.76
HIF1A-209ENST00000556827 FBXO25Q8TCJ0 367 aa4.08□□□□□ -1.76
HIF1A-209ENST00000556827 MIPOL1Q8TD10 442 aa4.08□□□□□ -1.76
HIF1A-209ENST00000556827 RNF138Q8WVD3 245 aa4.08□□□□□ -1.76
HIF1A-209ENST00000556827 PHF3Q92576 2039 aaKnown RBP4.08□□□□□ -1.76
HIF1A-209ENST00000556827 FAM162AQ96A26 154 aa4.08□□□□□ -1.76
HIF1A-209ENST00000556827 CCDC126Q96EE4 140 aa4.08□□□□□ -1.76
HIF1A-209ENST00000556827 ZHX1-C8orf76Q96EF9 292 aa4.08□□□□□ -1.76
HIF1A-209ENST00000556827 C11orf24Q96F05 449 aaPredicted RBP4.08□□□□□ -1.76
HIF1A-209ENST00000556827 SH3YL1Q96HL8 342 aaPredicted RBP4.08□□□□□ -1.76
HIF1A-209ENST00000556827 RNF145Q96MT1 663 aa4.08□□□□□ -1.76
HIF1A-209ENST00000556827 TSSK2Q96PF2 358 aa4.08□□□□□ -1.76
HIF1A-209ENST00000556827 TNFRSF13CQ96RJ3 184 aa4.08□□□□□ -1.76
HIF1A-209ENST00000556827 ZNF382Q96SR6 550 aa4.08□□□□□ -1.76
HIF1A-209ENST00000556827 HBEGFQ99075 208 aa4.08□□□□□ -1.76
HIF1A-209ENST00000556827 EBPLQ9BY08 206 aa4.08□□□□□ -1.76
HIF1A-209ENST00000556827 POTEKPQ9BYX7 375 aa4.08□□□□□ -1.76
HIF1A-209ENST00000556827 TMEM185BQ9H7F4 350 aa4.08□□□□□ -1.76
HIF1A-209ENST00000556827 MTHFD2LQ9H903 347 aaPredicted RBP4.08□□□□□ -1.76
HIF1A-209ENST00000556827 GRPEL1Q9HAV7 217 aa4.08□□□□□ -1.76
HIF1A-209ENST00000556827 RRAGDQ9NQL2 400 aaPredicted RBP4.08□□□□□ -1.76
HIF1A-209ENST00000556827 MED17Q9NVC6 651 aa4.08□□□□□ -1.76
HIF1A-209ENST00000556827 NDE1Q9NXR1 346 aa4.08□□□□□ -1.76
HIF1A-209ENST00000556827 TAS2R7Q9NYW3 318 aa4.08□□□□□ -1.76
HIF1A-209ENST00000556827 EMC3Q9P0I2 261 aa4.08□□□□□ -1.76
HIF1A-209ENST00000556827 HEATR5BQ9P2D3 2071 aa4.08□□□□□ -1.76
HIF1A-209ENST00000556827 SPG11Q96JI7 2443 aa4.07□□□□□ -1.76
HIF1A-209ENST00000556827 ABCA4P78363 2273 aa4.07□□□□□ -1.76
HIF1A-209ENST00000556827 GTF3C1Q12789 2109 aa4.07□□□□□ -1.76
HIF1A-209ENST00000556827 LOC105371242A0A075B767 164 aa4.07□□□□□ -1.76
HIF1A-209ENST00000556827 A0A0J9YW62 118 aa4.07□□□□□ -1.76
HIF1A-209ENST00000556827 CIB4A0PJX0 185 aa4.07□□□□□ -1.76
HIF1A-209ENST00000556827 A8MT66 165 aa4.07□□□□□ -1.76
HIF1A-209ENST00000556827 K7EQD1 137 aa4.07□□□□□ -1.76
HIF1A-209ENST00000556827 KIF2AO00139 706 aaPredicted RBP4.07□□□□□ -1.76
HIF1A-209ENST00000556827 ABCD4O14678 606 aa4.07□□□□□ -1.76
HIF1A-209ENST00000556827 CTDSPLO15194 276 aa4.07□□□□□ -1.76
HIF1A-209ENST00000556827 SEC22BO75396 215 aa4.07□□□□□ -1.76
HIF1A-209ENST00000556827 SLU7O95391 586 aaKnown RBP4.07□□□□□ -1.76
HIF1A-209ENST00000556827 OXSR1O95747 527 aaPredicted RBP4.07□□□□□ -1.76
HIF1A-209ENST00000556827 ERCC1P07992 297 aaPredicted RBP4.07□□□□□ -1.76
HIF1A-209ENST00000556827 IFI6P09912 130 aa4.07□□□□□ -1.76
HIF1A-209ENST00000556827 GGT1P19440 569 aa4.07□□□□□ -1.76
HIF1A-209ENST00000556827 IMPDH1P20839 514 aa4.07□□□□□ -1.76
HIF1A-209ENST00000556827 FABP6P51161 128 aa4.07□□□□□ -1.76
HIF1A-209ENST00000556827 CKAP4Q07065 602 aaKnown RBP4.07□□□□□ -1.76
HIF1A-209ENST00000556827 LOXL1Q08397 574 aaPredicted RBP4.07□□□□□ -1.76
HIF1A-209ENST00000556827 TMEM44Q2T9K0 475 aa4.07□□□□□ -1.76
HIF1A-209ENST00000556827 PGGHGQ32M88 737 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms