RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 CSNK1A1P48729 337 aa8.95□□□□□ -0.98
TMEM260-211ENST00000556648 CX3CR1P49238 355 aa8.95□□□□□ -0.98
TMEM260-211ENST00000556648 AP3S2P59780 193 aa8.95□□□□□ -0.98
TMEM260-211ENST00000556648 GABREP78334 506 aa8.95□□□□□ -0.98
TMEM260-211ENST00000556648 MRPS10P82664 201 aaKnown RBP8.95□□□□□ -0.98
TMEM260-211ENST00000556648 ENDOGQ14249 297 aaKnown RBP8.95□□□□□ -0.98
TMEM260-211ENST00000556648 GFOD2Q3B7J2 385 aa8.95□□□□□ -0.98
TMEM260-211ENST00000556648 C1orf100Q5SVJ3 147 aa8.95□□□□□ -0.98
TMEM260-211ENST00000556648 ZNF627Q7L945 461 aa8.95□□□□□ -0.98
TMEM260-211ENST00000556648 ADGRE4PQ86SQ3 457 aa8.95□□□□□ -0.98
TMEM260-211ENST00000556648 DTX1Q86Y01 620 aa8.95□□□□□ -0.98
TMEM260-211ENST00000556648 NAXDQ8IW45 347 aa8.95□□□□□ -0.98
TMEM260-211ENST00000556648 TMEM123Q8N131 208 aa8.95□□□□□ -0.98
TMEM260-211ENST00000556648 ZIC4Q8N9L1 334 aa8.95□□□□□ -0.98
TMEM260-211ENST00000556648 ASCC1Q8N9N2 400 aaKnown RBP8.95□□□□□ -0.98
TMEM260-211ENST00000556648 OR4C16Q8NGL9 310 aa8.95□□□□□ -0.98
TMEM260-211ENST00000556648 OR13C9Q8NGT0 318 aa8.95□□□□□ -0.98
TMEM260-211ENST00000556648 TMEM54Q969K7 222 aa8.95□□□□□ -0.98
TMEM260-211ENST00000556648 ITFG2Q969R8 447 aa8.95□□□□□ -0.98
TMEM260-211ENST00000556648 ZNF837Q96EG3 531 aaPredicted RBP8.95□□□□□ -0.98
TMEM260-211ENST00000556648 CYYR1Q96J86 154 aa8.95□□□□□ -0.98
TMEM260-211ENST00000556648 SPACA5Q96QH8 159 aa8.95□□□□□ -0.98
TMEM260-211ENST00000556648 SPRY4Q9C004 299 aa8.95□□□□□ -0.98
TMEM260-211ENST00000556648 CNTD2Q9H8S5 307 aa8.95□□□□□ -0.98
TMEM260-211ENST00000556648 ZFP64Q9NPA5 681 aa8.95□□□□□ -0.98
TMEM260-211ENST00000556648 P4HTMQ9NXG6 502 aa8.95□□□□□ -0.98
TMEM260-211ENST00000556648 MTFP1Q9UDX5 166 aa8.95□□□□□ -0.98
TMEM260-211ENST00000556648 FARSAQ9Y285 508 aaKnown RBP8.95□□□□□ -0.98
TMEM260-211ENST00000556648 SLC5A6Q9Y289 635 aa8.95□□□□□ -0.98
TMEM260-211ENST00000556648 LOC390937A0A1W2PQ73 354 aa8.94□□□□□ -0.98
TMEM260-211ENST00000556648 OR5H15A6NDH6 313 aa8.94□□□□□ -0.98
TMEM260-211ENST00000556648 NAP1L6A6NFF2 107 aa8.94□□□□□ -0.98
TMEM260-211ENST00000556648 SMAD9O15198 467 aaKnown RBP8.94□□□□□ -0.98
TMEM260-211ENST00000556648 CBR3O75828 277 aa8.94□□□□□ -0.98
TMEM260-211ENST00000556648 P04436 131 aa8.94□□□□□ -0.98
TMEM260-211ENST00000556648 JMJD7P0C870 316 aa8.94□□□□□ -0.98
TMEM260-211ENST00000556648 SULT1A3P0DMM9 295 aa8.94□□□□□ -0.98
TMEM260-211ENST00000556648 SULT1A4P0DMN0 295 aa8.94□□□□□ -0.98
TMEM260-211ENST00000556648 ABOP16442 354 aa8.94□□□□□ -0.98
TMEM260-211ENST00000556648 ZNF17P17021 662 aa8.94□□□□□ -0.98
TMEM260-211ENST00000556648 ERP29P30040 261 aaKnown RBP8.94□□□□□ -0.98
TMEM260-211ENST00000556648 STARP49675 285 aa8.94□□□□□ -0.98
TMEM260-211ENST00000556648 TNK1Q13470 666 aa8.94□□□□□ -0.98
TMEM260-211ENST00000556648 TAF13Q15543 124 aa8.94□□□□□ -0.98
TMEM260-211ENST00000556648 CSRP2Q16527 193 aa8.94□□□□□ -0.98
TMEM260-211ENST00000556648 KCNMB1Q16558 191 aa8.94□□□□□ -0.98
TMEM260-211ENST00000556648 ACER2Q5QJU3 275 aa8.94□□□□□ -0.98
TMEM260-211ENST00000556648 PLA2G2CQ5R387 149 aa8.94□□□□□ -0.98
TMEM260-211ENST00000556648 CD276Q5ZPR3 534 aa8.94□□□□□ -0.98
TMEM260-211ENST00000556648 SLC25A25Q6KCM7 469 aa8.94□□□□□ -0.98
TMEM260-211ENST00000556648 ZNF813Q6ZN06 617 aa8.94□□□□□ -0.98
TMEM260-211ENST00000556648 FAM57BQ71RH2 274 aa8.94□□□□□ -0.98
TMEM260-211ENST00000556648 HDDC2Q7Z4H3 204 aa8.94□□□□□ -0.98
TMEM260-211ENST00000556648 LUZP2Q86TE4 346 aa8.94□□□□□ -0.98
TMEM260-211ENST00000556648 NAA40Q86UY6 237 aa8.94□□□□□ -0.98
TMEM260-211ENST00000556648 ACBD4Q8NC06 268 aa8.94□□□□□ -0.98
TMEM260-211ENST00000556648 OR1M1Q8NGA1 313 aa8.94□□□□□ -0.98
TMEM260-211ENST00000556648 OR6N1Q8NGY5 312 aa8.94□□□□□ -0.98
TMEM260-211ENST00000556648 NKD1Q969G9 470 aa8.94□□□□□ -0.98
TMEM260-211ENST00000556648 NABP1Q96AH0 204 aa8.94□□□□□ -0.98
TMEM260-211ENST00000556648 CMBLQ96DG6 245 aa8.94□□□□□ -0.98
TMEM260-211ENST00000556648 TAAR9Q96RI9 348 aa8.94□□□□□ -0.98
TMEM260-211ENST00000556648 STRADBQ9C0K7 418 aa8.94□□□□□ -0.98
TMEM260-211ENST00000556648 DIABLOQ9NR28 239 aa8.94□□□□□ -0.98
TMEM260-211ENST00000556648 NPIPA2E9PIF3 369 aa8.93□□□□□ -0.98
TMEM260-211ENST00000556648 NPIPA3F8WFD2 350 aa8.93□□□□□ -0.98
TMEM260-211ENST00000556648 SSNA1O43805 119 aa8.93□□□□□ -0.98
TMEM260-211ENST00000556648 VSIG10L2P0DP72 767 aa8.93□□□□□ -0.98
TMEM260-211ENST00000556648 GABRA1P14867 456 aa8.93□□□□□ -0.98
TMEM260-211ENST00000556648 BDKRB2P30411 391 aa8.93□□□□□ -0.98
TMEM260-211ENST00000556648 NTF4P34130 210 aa8.93□□□□□ -0.98
TMEM260-211ENST00000556648 RAG2P55895 527 aa8.93□□□□□ -0.98
TMEM260-211ENST00000556648 RAC1P63000 192 aa8.93□□□□□ -0.98
TMEM260-211ENST00000556648 PMPCAQ10713 525 aa8.93□□□□□ -0.98
TMEM260-211ENST00000556648 UNC119Q13432 240 aa8.93□□□□□ -0.98
TMEM260-211ENST00000556648 SSPNQ14714 243 aa8.93□□□□□ -0.98
TMEM260-211ENST00000556648 DMRTC1Q5HYR2 192 aa8.93□□□□□ -0.98
TMEM260-211ENST00000556648 WIPI1Q5MNZ9 446 aaPredicted RBP8.93□□□□□ -0.98
TMEM260-211ENST00000556648 ABHD12BQ7Z5M8 362 aaPredicted RBP8.93□□□□□ -0.98
TMEM260-211ENST00000556648 GGNQ86UU5 652 aa8.93□□□□□ -0.98
TMEM260-211ENST00000556648 COMMD2Q86X83 199 aa8.93□□□□□ -0.98
TMEM260-211ENST00000556648 LRRC18Q8N456 261 aa8.93□□□□□ -0.98
TMEM260-211ENST00000556648 C9orf62Q8N4C0 152 aa8.93□□□□□ -0.98
TMEM260-211ENST00000556648 OR11H4Q8NGC9 324 aa8.93□□□□□ -0.98
TMEM260-211ENST00000556648 OR52B4Q8NGK2 314 aa8.93□□□□□ -0.98
TMEM260-211ENST00000556648 OR8S1Q8NH09 359 aa8.93□□□□□ -0.98
TMEM260-211ENST00000556648 OR14L1PQ8NHC6 308 aa8.93□□□□□ -0.98
TMEM260-211ENST00000556648 GRPEL2Q8TAA5 225 aa8.93□□□□□ -0.98
TMEM260-211ENST00000556648 PSMF1Q92530 271 aa8.93□□□□□ -0.98
TMEM260-211ENST00000556648 FAM46BQ96A09 425 aa8.93□□□□□ -0.98
TMEM260-211ENST00000556648 FAM71F1Q96KD3 344 aaPredicted RBP8.93□□□□□ -0.98
TMEM260-211ENST00000556648 PIGQQ9BRB3 760 aa8.93□□□□□ -0.98
TMEM260-211ENST00000556648 NOX3Q9HBY0 568 aa8.93□□□□□ -0.98
TMEM260-211ENST00000556648 GPR84Q9NQS5 396 aa8.93□□□□□ -0.98
TMEM260-211ENST00000556648 SLC17A5Q9NRA2 495 aa8.93□□□□□ -0.98
TMEM260-211ENST00000556648 GPR179Q6PRD1 2367 aa8.93□□□□□ -0.98
TMEM260-211ENST00000556648 A0A1B0GVI7 797 aa8.93□□□□□ -0.98
TMEM260-211ENST00000556648 RBBP9O75884 186 aa8.93□□□□□ -0.98
TMEM260-211ENST00000556648 NDUFB6O95139 128 aa8.93□□□□□ -0.98
TMEM260-211ENST00000556648 CD3DP04234 171 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms