RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 OR5H15A6NDH6 313 aa16.16■□□□□ 0.18
SDR39U1-220ENST00000556548 UBL3O95164 117 aa16.16■□□□□ 0.18
SDR39U1-220ENST00000556548 ISG15P05161 165 aa16.16■□□□□ 0.18
SDR39U1-220ENST00000556548 PTHLHP12272 177 aa16.16■□□□□ 0.18
SDR39U1-220ENST00000556548 NR2C1P13056 603 aa16.16■□□□□ 0.18
SDR39U1-220ENST00000556548 WT1P19544 449 aaPredicted RBP16.16■□□□□ 0.18
SDR39U1-220ENST00000556548 ACHEP22303 614 aa16.16■□□□□ 0.18
SDR39U1-220ENST00000556548 ZNF121P58317 390 aaPredicted RBP16.16■□□□□ 0.18
SDR39U1-220ENST00000556548 KCNMB1Q16558 191 aa16.16■□□□□ 0.18
SDR39U1-220ENST00000556548 TMEM244Q5VVB8 128 aa16.16■□□□□ 0.18
SDR39U1-220ENST00000556548 SLC25A25Q6KCM7 469 aa16.16■□□□□ 0.18
SDR39U1-220ENST00000556548 LINGO2Q7L985 606 aa16.16■□□□□ 0.18
SDR39U1-220ENST00000556548 AAED1Q7RTV5 226 aa16.16■□□□□ 0.18
SDR39U1-220ENST00000556548 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.16■□□□□ 0.18
SDR39U1-220ENST00000556548 COMMD2Q86X83 199 aa16.16■□□□□ 0.18
SDR39U1-220ENST00000556548 NABP1Q96AH0 204 aa16.16■□□□□ 0.18
SDR39U1-220ENST00000556548 ALKBH3Q96Q83 286 aaPredicted RBP16.16■□□□□ 0.18
SDR39U1-220ENST00000556548 IRF2BPLQ9H1B7 796 aa16.16■□□□□ 0.18
SDR39U1-220ENST00000556548 CRLF2Q9HC73 371 aa16.16■□□□□ 0.18
SDR39U1-220ENST00000556548 CGGBP1Q9UFW8 167 aaPredicted RBP16.16■□□□□ 0.18
SDR39U1-220ENST00000556548 STEAP1Q9UHE8 339 aa16.16■□□□□ 0.18
SDR39U1-220ENST00000556548 CSAG2Q9Y5P2 127 aa16.16■□□□□ 0.18
SDR39U1-220ENST00000556548 MUC6Q6W4X9 2439 aa16.16■□□□□ 0.18
SDR39U1-220ENST00000556548 HPNP05981 417 aa16.15■□□□□ 0.18
SDR39U1-220ENST00000556548 UBCP0CG48 685 aaKnown RBP16.15■□□□□ 0.18
SDR39U1-220ENST00000556548 CD82P27701 267 aa16.15■□□□□ 0.18
SDR39U1-220ENST00000556548 LHX2P50458 406 aa16.15■□□□□ 0.18
SDR39U1-220ENST00000556548 CCL11P51671 97 aa16.15■□□□□ 0.18
SDR39U1-220ENST00000556548 ARG2P78540 354 aa16.15■□□□□ 0.18
SDR39U1-220ENST00000556548 MRPS15P82914 257 aaKnown RBP16.15■□□□□ 0.18
SDR39U1-220ENST00000556548 ENDOGQ14249 297 aaKnown RBP16.15■□□□□ 0.18
SDR39U1-220ENST00000556548 C3AR1Q16581 482 aa16.15■□□□□ 0.18
SDR39U1-220ENST00000556548 NAA40Q86UY6 237 aa16.15■□□□□ 0.18
SDR39U1-220ENST00000556548 GRPEL2Q8TAA5 225 aa16.15■□□□□ 0.18
SDR39U1-220ENST00000556548 SLC7A6Q92536 515 aa16.15■□□□□ 0.18
SDR39U1-220ENST00000556548 PNPLA2Q96AD5 504 aa16.15■□□□□ 0.18
SDR39U1-220ENST00000556548 AUNIPQ9H7T9 357 aa16.15■□□□□ 0.18
SDR39U1-220ENST00000556548 ZNF319Q9P2F9 582 aa16.15■□□□□ 0.18
SDR39U1-220ENST00000556548 NLKQ9UBE8 527 aa16.15■□□□□ 0.18
SDR39U1-220ENST00000556548 CAMK2AQ9UQM7 478 aa16.15■□□□□ 0.18
SDR39U1-220ENST00000556548 FRYQ5TBA9 3013 aa16.15■□□□□ 0.18
SDR39U1-220ENST00000556548 KIAA1549Q9HCM3 1950 aa16.15■□□□□ 0.18
SDR39U1-220ENST00000556548 SYT7O43581 403 aa16.14■□□□□ 0.18
SDR39U1-220ENST00000556548 IGHV3-9P01782 118 aa16.14■□□□□ 0.18
SDR39U1-220ENST00000556548 CALCBP10092 127 aa16.14■□□□□ 0.18
SDR39U1-220ENST00000556548 GNALP38405 381 aa16.14■□□□□ 0.18
SDR39U1-220ENST00000556548 CX3CR1P49238 355 aa16.14■□□□□ 0.18
SDR39U1-220ENST00000556548 ZNF283Q8N7M2 679 aa16.14■□□□□ 0.18
SDR39U1-220ENST00000556548 MDS2Q8NDY4 140 aa16.14■□□□□ 0.18
SDR39U1-220ENST00000556548 LRFN3Q9BTN0 628 aa16.14■□□□□ 0.18
SDR39U1-220ENST00000556548 NPAP1Q9NZP6 1156 aa16.14■□□□□ 0.18
SDR39U1-220ENST00000556548 FAM240BA0A1B0GVZ2 78 aa16.14■□□□□ 0.17
SDR39U1-220ENST00000556548 NME2P1O60361 137 aa16.14■□□□□ 0.17
SDR39U1-220ENST00000556548 NME2P22392 152 aa16.14■□□□□ 0.17
SDR39U1-220ENST00000556548 NOVA1P51513 510 aaKnown RBP16.14■□□□□ 0.17
SDR39U1-220ENST00000556548 EFNB2P52799 333 aa16.14■□□□□ 0.17
SDR39U1-220ENST00000556548 ART1P52961 327 aa16.14■□□□□ 0.17
SDR39U1-220ENST00000556548 PSMA6P60900 246 aaKnown RBP16.14■□□□□ 0.17
SDR39U1-220ENST00000556548 PPIAP62937 165 aaKnown RBP16.14■□□□□ 0.17
SDR39U1-220ENST00000556548 RSPO4Q2I0M5 234 aaPredicted RBP16.14■□□□□ 0.17
SDR39U1-220ENST00000556548 MZT2BQ6NZ67 158 aa16.14■□□□□ 0.17
SDR39U1-220ENST00000556548 FAM57BQ71RH2 274 aa16.14■□□□□ 0.17
SDR39U1-220ENST00000556548 THRSPQ92748 146 aa16.14■□□□□ 0.17
SDR39U1-220ENST00000556548 YIPF5Q969M3 257 aa16.14■□□□□ 0.17
SDR39U1-220ENST00000556548 CPNE4Q96A23 557 aaPredicted RBP16.14■□□□□ 0.17
SDR39U1-220ENST00000556548 RBFOX1Q9NWB1 397 aaKnown RBP16.14■□□□□ 0.17
SDR39U1-220ENST00000556548 MYEF2Q9P2K5 600 aaKnown RBP16.14■□□□□ 0.17
SDR39U1-220ENST00000556548 SPENQ96T58 3664 aaKnown RBP16.14■□□□□ 0.17
SDR39U1-220ENST00000556548 C5orf63A6NC05 138 aa16.13■□□□□ 0.17
SDR39U1-220ENST00000556548 F5H5K5 113 aa16.13■□□□□ 0.17
SDR39U1-220ENST00000556548 LIPCP11150 499 aa16.13■□□□□ 0.17
SDR39U1-220ENST00000556548 IGFBP3P17936 291 aaPredicted RBP16.13■□□□□ 0.17
SDR39U1-220ENST00000556548 CDK2P24941 298 aa16.13■□□□□ 0.17
SDR39U1-220ENST00000556548 ZNF84P51523 738 aa16.13■□□□□ 0.17
SDR39U1-220ENST00000556548 LSM6P62312 80 aaKnown RBP16.13■□□□□ 0.17
SDR39U1-220ENST00000556548 PITPNAQ00169 270 aa16.13■□□□□ 0.17
SDR39U1-220ENST00000556548 GPR176Q14439 515 aa16.13■□□□□ 0.17
SDR39U1-220ENST00000556548 ABLIM2Q6H8Q1 611 aa16.13■□□□□ 0.17
SDR39U1-220ENST00000556548 OR8B12Q8NGG6 310 aa16.13■□□□□ 0.17
SDR39U1-220ENST00000556548 ADAT3Q96EY9 351 aaPredicted RBP16.13■□□□□ 0.17
SDR39U1-220ENST00000556548 S100A16Q96FQ6 103 aaKnown RBP16.13■□□□□ 0.17
SDR39U1-220ENST00000556548 GAL3ST1Q99999 423 aa16.13■□□□□ 0.17
SDR39U1-220ENST00000556548 MRPL15Q9P015 296 aaKnown RBP16.13■□□□□ 0.17
SDR39U1-220ENST00000556548 KLF13Q9Y2Y9 288 aaPredicted RBP16.13■□□□□ 0.17
SDR39U1-220ENST00000556548 SPEF1Q9Y4P9 236 aa16.13■□□□□ 0.17
SDR39U1-220ENST00000556548 DCTDP32321 178 aa16.13■□□□□ 0.17
SDR39U1-220ENST00000556548 CLDN18P56856 261 aa16.13■□□□□ 0.17
SDR39U1-220ENST00000556548 RAB11BQ15907 218 aa16.13■□□□□ 0.17
SDR39U1-220ENST00000556548 GLYATL3Q5SZD4 288 aa16.13■□□□□ 0.17
SDR39U1-220ENST00000556548 AGAP6Q5VW22 663 aa16.13■□□□□ 0.17
SDR39U1-220ENST00000556548 ABHD12BQ7Z5M8 362 aaPredicted RBP16.13■□□□□ 0.17
SDR39U1-220ENST00000556548 CCDC28AQ8IWP9 274 aa16.13■□□□□ 0.17
SDR39U1-220ENST00000556548 JAGN1Q8N5M9 183 aa16.13■□□□□ 0.17
SDR39U1-220ENST00000556548 FBXO17Q96EF6 278 aa16.13■□□□□ 0.17
SDR39U1-220ENST00000556548 DEFB127Q9H1M4 99 aa16.13■□□□□ 0.17
SDR39U1-220ENST00000556548 ABCG5Q9H222 651 aa16.13■□□□□ 0.17
SDR39U1-220ENST00000556548 ZNF552Q9H707 407 aaPredicted RBP16.13■□□□□ 0.17
SDR39U1-220ENST00000556548 ZNF275Q9NSD4 429 aaPredicted RBP16.13■□□□□ 0.17
SDR39U1-220ENST00000556548 KCNN3Q9UGI6 736 aa16.13■□□□□ 0.17
SDR39U1-220ENST00000556548 FOXJ3Q9UPW0 622 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms