RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 PSG7Q13046 419 aa9.83□□□□□ -0.84
SLIRP-205ENST00000556310 ATP6AP1Q15904 470 aa9.83□□□□□ -0.84
SLIRP-205ENST00000556310 KRTAP27-1Q3LI81 207 aa9.83□□□□□ -0.84
SLIRP-205ENST00000556310 FAM209AQ5JX71 171 aa9.83□□□□□ -0.84
SLIRP-205ENST00000556310 LYPD4Q6UWN0 246 aa9.83□□□□□ -0.84
SLIRP-205ENST00000556310 ATG16L2Q8NAA4 619 aa9.83□□□□□ -0.84
SLIRP-205ENST00000556310 OR51L1Q8NGJ5 315 aa9.83□□□□□ -0.84
SLIRP-205ENST00000556310 ZNRF4Q8WWF5 429 aa9.83□□□□□ -0.84
SLIRP-205ENST00000556310 GTF3AQ92664 365 aaKnown RBP9.83□□□□□ -0.84
SLIRP-205ENST00000556310 APOBEC3DQ96AK3 386 aaPredicted RBP9.83□□□□□ -0.84
SLIRP-205ENST00000556310 DUS3LQ96G46 650 aaKnown RBP9.83□□□□□ -0.84
SLIRP-205ENST00000556310 PITX2Q99697 317 aa9.83□□□□□ -0.84
SLIRP-205ENST00000556310 PNRC2Q9NPJ4 139 aaKnown RBP9.83□□□□□ -0.84
SLIRP-205ENST00000556310 KIF17Q9P2E2 1029 aa9.83□□□□□ -0.84
SLIRP-205ENST00000556310 STARD10Q9Y365 291 aa9.83□□□□□ -0.84
SLIRP-205ENST00000556310 JMJD1CQ15652 2540 aa9.83□□□□□ -0.84
SLIRP-205ENST00000556310 TIMM8AO60220 97 aaPredicted RBP9.82□□□□□ -0.84
SLIRP-205ENST00000556310 RP2O75695 350 aa9.82□□□□□ -0.84
SLIRP-205ENST00000556310 CIB2O75838 187 aa9.82□□□□□ -0.84
SLIRP-205ENST00000556310 IGHV1-46P01743 117 aa9.82□□□□□ -0.84
SLIRP-205ENST00000556310 IGHV4-31P0DP07 118 aa9.82□□□□□ -0.84
SLIRP-205ENST00000556310 CLUP10909 449 aa9.82□□□□□ -0.84
SLIRP-205ENST00000556310 FCGR1AP12314 374 aa9.82□□□□□ -0.84
SLIRP-205ENST00000556310 CD33P20138 364 aa9.82□□□□□ -0.84
SLIRP-205ENST00000556310 PAICSP22234 425 aaKnown RBP9.82□□□□□ -0.84
SLIRP-205ENST00000556310 PRKACGP22612 351 aa9.82□□□□□ -0.84
SLIRP-205ENST00000556310 POU1F1P28069 291 aa9.82□□□□□ -0.84
SLIRP-205ENST00000556310 GZMKP49863 264 aa9.82□□□□□ -0.84
SLIRP-205ENST00000556310 ENTPD1P49961 510 aa9.82□□□□□ -0.84
SLIRP-205ENST00000556310 CHN2P52757 468 aa9.82□□□□□ -0.84
SLIRP-205ENST00000556310 CCL8P80075 99 aa9.82□□□□□ -0.84
SLIRP-205ENST00000556310 CCNIQ14094 377 aa9.82□□□□□ -0.84
SLIRP-205ENST00000556310 PCK2Q16822 640 aa9.82□□□□□ -0.84
SLIRP-205ENST00000556310 C6orf52Q5T4I8 152 aa9.82□□□□□ -0.84
SLIRP-205ENST00000556310 FAHD1Q6P587 224 aa9.82□□□□□ -0.84
SLIRP-205ENST00000556310 FBXW12Q6X9E4 464 aa9.82□□□□□ -0.84
SLIRP-205ENST00000556310 COLCA1Q6ZS62 124 aa9.82□□□□□ -0.84
SLIRP-205ENST00000556310 ASRGL1Q7L266 308 aa9.82□□□□□ -0.84
SLIRP-205ENST00000556310 PARP8Q8N3A8 854 aa9.82□□□□□ -0.84
SLIRP-205ENST00000556310 OR5L1Q8NGL2 311 aa9.82□□□□□ -0.84
SLIRP-205ENST00000556310 OR6K6Q8NGW6 343 aa9.82□□□□□ -0.84
SLIRP-205ENST00000556310 OR5K1Q8NHB7 308 aa9.82□□□□□ -0.84
SLIRP-205ENST00000556310 YIPF5Q969M3 257 aa9.82□□□□□ -0.84
SLIRP-205ENST00000556310 MAP6Q96JE9 813 aa9.82□□□□□ -0.84
SLIRP-205ENST00000556310 DIRC2Q96SL1 478 aa9.82□□□□□ -0.84
SLIRP-205ENST00000556310 SAP30LQ9HAJ7 183 aa9.82□□□□□ -0.84
SLIRP-205ENST00000556310 SLC25A19Q9HC21 320 aa9.82□□□□□ -0.84
SLIRP-205ENST00000556310 PAPOLBQ9NRJ5 636 aaKnown RBP9.82□□□□□ -0.84
SLIRP-205ENST00000556310 ZNF275Q9NSD4 429 aaPredicted RBP9.82□□□□□ -0.84
SLIRP-205ENST00000556310 DDX28Q9NUL7 540 aaKnown RBP9.82□□□□□ -0.84
SLIRP-205ENST00000556310 PURGQ9UJV8 347 aaKnown RBP9.82□□□□□ -0.84
SLIRP-205ENST00000556310 FAM183AA6NL82 134 aa9.81□□□□□ -0.84
SLIRP-205ENST00000556310 SURF4O15260 269 aa9.81□□□□□ -0.84
SLIRP-205ENST00000556310 TPD52L2O43399 206 aaKnown RBP9.81□□□□□ -0.84
SLIRP-205ENST00000556310 SPRY3O43610 288 aa9.81□□□□□ -0.84
SLIRP-205ENST00000556310 HMGN1P05114 100 aa9.81□□□□□ -0.84
SLIRP-205ENST00000556310 CD55P08174 381 aa9.81□□□□□ -0.84
SLIRP-205ENST00000556310 SPARCP09486 303 aa9.81□□□□□ -0.84
SLIRP-205ENST00000556310 ACSM4P0C7M7 580 aa9.81□□□□□ -0.84
SLIRP-205ENST00000556310 PSKH1P11801 424 aa9.81□□□□□ -0.84
SLIRP-205ENST00000556310 RAC2P15153 192 aa9.81□□□□□ -0.84
SLIRP-205ENST00000556310 ZNF16P17020 682 aaPredicted RBP9.81□□□□□ -0.84
SLIRP-205ENST00000556310 COL8A2P25067 703 aa9.81□□□□□ -0.84
SLIRP-205ENST00000556310 FASP25445 335 aa9.81□□□□□ -0.84
SLIRP-205ENST00000556310 RPS27P42677 84 aaKnown RBP9.81□□□□□ -0.84
SLIRP-205ENST00000556310 CRYBB2P43320 205 aa9.81□□□□□ -0.84
SLIRP-205ENST00000556310 GPR6P46095 362 aaPredicted RBP9.81□□□□□ -0.84
SLIRP-205ENST00000556310 CDK5Q00535 292 aa9.81□□□□□ -0.84
SLIRP-205ENST00000556310 GINS1Q14691 196 aa9.81□□□□□ -0.84
SLIRP-205ENST00000556310 TSTQ16762 297 aaKnown RBP9.81□□□□□ -0.84
SLIRP-205ENST00000556310 RSPO1Q2MKA7 263 aaPredicted RBP9.81□□□□□ -0.84
SLIRP-205ENST00000556310 TEX30Q5JUR7 227 aa9.81□□□□□ -0.84
SLIRP-205ENST00000556310 LINC01590Q5TEZ4 76 aa9.81□□□□□ -0.84
SLIRP-205ENST00000556310 CYB5R2Q6BCY4 276 aa9.81□□□□□ -0.84
SLIRP-205ENST00000556310 ACSM5Q6NUN0 579 aa9.81□□□□□ -0.84
SLIRP-205ENST00000556310 CCDC121Q6ZUS5 278 aa9.81□□□□□ -0.84
SLIRP-205ENST00000556310 HIPK1Q86Z02 1210 aa9.81□□□□□ -0.84
SLIRP-205ENST00000556310 OR10S1Q8NGN2 331 aa9.81□□□□□ -0.84
SLIRP-205ENST00000556310 SPTSSAQ969W0 71 aa9.81□□□□□ -0.84
SLIRP-205ENST00000556310 HAVCR1Q96D42 359 aa9.81□□□□□ -0.84
SLIRP-205ENST00000556310 CMBLQ96DG6 245 aa9.81□□□□□ -0.84
SLIRP-205ENST00000556310 ELMOD3Q96FG2 381 aa9.81□□□□□ -0.84
SLIRP-205ENST00000556310 HCAR1Q9BXC0 346 aa9.81□□□□□ -0.84
SLIRP-205ENST00000556310 C1QTNF5Q9BXJ0 243 aa9.81□□□□□ -0.84
SLIRP-205ENST00000556310 EGLN1Q9GZT9 426 aa9.81□□□□□ -0.84
SLIRP-205ENST00000556310 MED20Q9H944 212 aa9.81□□□□□ -0.84
SLIRP-205ENST00000556310 WDR76Q9H967 626 aa9.81□□□□□ -0.84
SLIRP-205ENST00000556310 YAE1D1Q9NRH1 226 aa9.81□□□□□ -0.84
SLIRP-205ENST00000556310 DECR2Q9NUI1 292 aa9.81□□□□□ -0.84
SLIRP-205ENST00000556310 PTTG3PQ9NZH4 202 aa9.81□□□□□ -0.84
SLIRP-205ENST00000556310 ZDHHC8Q9ULC8 765 aa9.81□□□□□ -0.84
SLIRP-205ENST00000556310 AP4S1Q9Y587 144 aa9.81□□□□□ -0.84
SLIRP-205ENST00000556310 IGHV1-69-2A0A0G2JMI3 117 aa9.8□□□□□ -0.84
SLIRP-205ENST00000556310 A8MV72 311 aaPredicted RBP9.8□□□□□ -0.84
SLIRP-205ENST00000556310 PRR23D1E9PI22 279 aaPredicted RBP9.8□□□□□ -0.84
SLIRP-205ENST00000556310 F5H5K5 113 aa9.8□□□□□ -0.84
SLIRP-205ENST00000556310 M0R135 149 aa9.8□□□□□ -0.84
SLIRP-205ENST00000556310 GLCEO94923 617 aa9.8□□□□□ -0.84
SLIRP-205ENST00000556310 PRR23D2P0DMB1 279 aaPredicted RBP9.8□□□□□ -0.84
SLIRP-205ENST00000556310 OTX1P32242 354 aaPredicted RBP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms