RNA–Protein interactions for RNA: ENST00000556285.1

TGFB3-204, Transcript of transforming growth factor beta 3, humanhuman

TSL 1 (best) BASIC

Gene TGFB3, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-204ENST00000556285 SRA1Q9HD15 236 aaKnown RBP11.12□□□□□ -0.63
TGFB3-204ENST00000556285 RPS6KA6Q9UK32 745 aa11.12□□□□□ -0.63
TGFB3-204ENST00000556285 POLR1DQ9Y2S0 133 aa11.12□□□□□ -0.63
TGFB3-204ENST00000556285 MDFIC2A0A1B0GVS7 189 aa11.11□□□□□ -0.63
TGFB3-204ENST00000556285 ANOS1P23352 680 aa11.11□□□□□ -0.63
TGFB3-204ENST00000556285 PSME3P61289 254 aa11.11□□□□□ -0.63
TGFB3-204ENST00000556285 BAMBIQ13145 260 aa11.11□□□□□ -0.63
TGFB3-204ENST00000556285 LYPD2Q6UXB3 125 aa11.11□□□□□ -0.63
TGFB3-204ENST00000556285 CFAP77Q6ZQR2 320 aa11.11□□□□□ -0.63
TGFB3-204ENST00000556285 ADCK1Q86TW2 530 aa11.11□□□□□ -0.63
TGFB3-204ENST00000556285 KLBQ86Z14 1044 aa11.11□□□□□ -0.63
TGFB3-204ENST00000556285 LINC00346Q8IVM7 164 aa11.11□□□□□ -0.63
TGFB3-204ENST00000556285 OR6V1Q8N148 313 aa11.11□□□□□ -0.63
TGFB3-204ENST00000556285 C19orf18Q8NEA5 215 aa11.11□□□□□ -0.63
TGFB3-204ENST00000556285 OR13G1Q8NGZ3 307 aa11.11□□□□□ -0.63
TGFB3-204ENST00000556285 APOBEC3DQ96AK3 386 aaPredicted RBP11.11□□□□□ -0.63
TGFB3-204ENST00000556285 DACT3Q96B18 629 aaPredicted RBP11.11□□□□□ -0.63
TGFB3-204ENST00000556285 DHRS1Q96LJ7 313 aa11.11□□□□□ -0.63
TGFB3-204ENST00000556285 COG8Q96MW5 612 aa11.11□□□□□ -0.63
TGFB3-204ENST00000556285 ZNF582Q96NG8 517 aaPredicted RBP11.11□□□□□ -0.63
TGFB3-204ENST00000556285 ERMAPQ96PL5 475 aaPredicted RBP11.11□□□□□ -0.63
TGFB3-204ENST00000556285 NMNAT3Q96T66 252 aa11.11□□□□□ -0.63
TGFB3-204ENST00000556285 SLC30A2Q9BRI3 323 aa11.11□□□□□ -0.63
TGFB3-204ENST00000556285 TMEM246Q9BRR3 403 aa11.11□□□□□ -0.63
TGFB3-204ENST00000556285 SSBP3Q9BWW4 388 aaPredicted RBP11.11□□□□□ -0.63
TGFB3-204ENST00000556285 NDEL1Q9GZM8 345 aa11.11□□□□□ -0.63
TGFB3-204ENST00000556285 FN3KQ9H479 309 aa11.11□□□□□ -0.63
TGFB3-204ENST00000556285 ABCD2Q9UBJ2 740 aa11.11□□□□□ -0.63
TGFB3-204ENST00000556285 OR5V1Q9UGF6 321 aa11.11□□□□□ -0.63
TGFB3-204ENST00000556285 B9D1Q9UPM9 204 aa11.11□□□□□ -0.63
TGFB3-204ENST00000556285 AURKCQ9UQB9 309 aa11.11□□□□□ -0.63
TGFB3-204ENST00000556285 FAM32AQ9Y421 112 aaKnown RBP11.11□□□□□ -0.63
TGFB3-204ENST00000556285 V9GYQ6 96 aa11.11□□□□□ -0.63
TGFB3-204ENST00000556285 TGP01266 2768 aa11.11□□□□□ -0.63
TGFB3-204ENST00000556285 IQCF6A8MYZ5 107 aa11.1□□□□□ -0.63
TGFB3-204ENST00000556285 RPS2P15880 293 aaKnown RBP11.1□□□□□ -0.63
TGFB3-204ENST00000556285 RHCEP18577 417 aa11.1□□□□□ -0.63
TGFB3-204ENST00000556285 RGS6P49758 472 aa11.1□□□□□ -0.63
TGFB3-204ENST00000556285 RPS6KA3P51812 740 aa11.1□□□□□ -0.63
TGFB3-204ENST00000556285 GUCA2AQ02747 115 aa11.1□□□□□ -0.63
TGFB3-204ENST00000556285 COX10Q12887 443 aa11.1□□□□□ -0.63
TGFB3-204ENST00000556285 FOXL1Q12952 345 aa11.1□□□□□ -0.63
TGFB3-204ENST00000556285 SLC9A3R2Q15599 337 aa11.1□□□□□ -0.63
TGFB3-204ENST00000556285 KRTAP27-1Q3LI81 207 aa11.1□□□□□ -0.63
TGFB3-204ENST00000556285 PRR31Q5SQ13 230 aa11.1□□□□□ -0.63
TGFB3-204ENST00000556285 GLYATQ6IB77 296 aa11.1□□□□□ -0.63
TGFB3-204ENST00000556285 SLC27A4Q6P1M0 643 aa11.1□□□□□ -0.63
TGFB3-204ENST00000556285 LEG1Q6P5S2 330 aa11.1□□□□□ -0.63
TGFB3-204ENST00000556285 SMARCD3Q6STE5 483 aa11.1□□□□□ -0.63
TGFB3-204ENST00000556285 HACD2Q6Y1H2 254 aa11.1□□□□□ -0.63
TGFB3-204ENST00000556285 COLCA1Q6ZS62 124 aa11.1□□□□□ -0.63
TGFB3-204ENST00000556285 MUC20Q8N307 709 aaPredicted RBP11.1□□□□□ -0.63
TGFB3-204ENST00000556285 PARP8Q8N3A8 854 aa11.1□□□□□ -0.63
TGFB3-204ENST00000556285 GJC3Q8NFK1 279 aa11.1□□□□□ -0.63
TGFB3-204ENST00000556285 SLC26A10Q8NG04 563 aa11.1□□□□□ -0.63
TGFB3-204ENST00000556285 OR52E2Q8NGJ4 325 aa11.1□□□□□ -0.63
TGFB3-204ENST00000556285 OR5L1Q8NGL2 311 aa11.1□□□□□ -0.63
TGFB3-204ENST00000556285 OR4K13Q8NH42 304 aa11.1□□□□□ -0.63
TGFB3-204ENST00000556285 COQ7Q99807 217 aa11.1□□□□□ -0.63
TGFB3-204ENST00000556285 MS4A7Q9GZW8 240 aaPredicted RBP11.1□□□□□ -0.63
TGFB3-204ENST00000556285 DCAF13Q9NV06 445 aaKnown RBP11.1□□□□□ -0.63
TGFB3-204ENST00000556285 ATPIF1Q9UII2 106 aa11.1□□□□□ -0.63
TGFB3-204ENST00000556285 LRCH1Q9Y2L9 728 aa11.1□□□□□ -0.63
TGFB3-204ENST00000556285 IGHV2-70DA0A0C4DH43 119 aa11.09□□□□□ -0.63
TGFB3-204ENST00000556285 A0A1B0GWJ7 208 aa11.09□□□□□ -0.63
TGFB3-204ENST00000556285 C5orf63A6NC05 138 aa11.09□□□□□ -0.63
TGFB3-204ENST00000556285 J3QW42 95 aa11.09□□□□□ -0.63
TGFB3-204ENST00000556285 CCDC22O60826 627 aa11.09□□□□□ -0.63
TGFB3-204ENST00000556285 ACSM4P0C7M7 580 aa11.09□□□□□ -0.63
TGFB3-204ENST00000556285 HIST1H1CP16403 213 aaKnown RBP11.09□□□□□ -0.63
TGFB3-204ENST00000556285 CRABP1P29762 137 aa11.09□□□□□ -0.63
TGFB3-204ENST00000556285 SRP9P49458 86 aaKnown RBP11.09□□□□□ -0.63
TGFB3-204ENST00000556285 MAB21L1Q13394 359 aa11.09□□□□□ -0.63
TGFB3-204ENST00000556285 ZNF404Q494X3 552 aa11.09□□□□□ -0.63
TGFB3-204ENST00000556285 SLC18B1Q6NT16 456 aa11.09□□□□□ -0.63
TGFB3-204ENST00000556285 RAB40AQ8WXH6 277 aa11.09□□□□□ -0.63
TGFB3-204ENST00000556285 UPRTQ96BW1 309 aa11.09□□□□□ -0.63
TGFB3-204ENST00000556285 HDHD2Q9H0R4 259 aa11.09□□□□□ -0.63
TGFB3-204ENST00000556285 PNRC2Q9NPJ4 139 aaKnown RBP11.09□□□□□ -0.63
TGFB3-204ENST00000556285 RPRD1BQ9NQG5 326 aaKnown RBP11.09□□□□□ -0.63
TGFB3-204ENST00000556285 TRAV40A0A0B4J280 105 aa11.08□□□□□ -0.64
TGFB3-204ENST00000556285 OR6C68A6NDL8 312 aa11.08□□□□□ -0.64
TGFB3-204ENST00000556285 F5H5K5 113 aa11.08□□□□□ -0.64
TGFB3-204ENST00000556285 PLATP00750 562 aa11.08□□□□□ -0.64
TGFB3-204ENST00000556285 SEMG1P04279 462 aa11.08□□□□□ -0.64
TGFB3-204ENST00000556285 RNASE1P07998 156 aaKnown RBP11.08□□□□□ -0.64
TGFB3-204ENST00000556285 PSKH1P11801 424 aa11.08□□□□□ -0.64
TGFB3-204ENST00000556285 FPR3P25089 353 aa11.08□□□□□ -0.64
TGFB3-204ENST00000556285 MSX2P35548 267 aaPredicted RBP11.08□□□□□ -0.64
TGFB3-204ENST00000556285 GGT2P36268 569 aa11.08□□□□□ -0.64
TGFB3-204ENST00000556285 MDH1P40925 334 aaKnown RBP11.08□□□□□ -0.64
TGFB3-204ENST00000556285 RPS27P42677 84 aaKnown RBP11.08□□□□□ -0.64
TGFB3-204ENST00000556285 GNB2P62879 340 aa11.08□□□□□ -0.64
TGFB3-204ENST00000556285 GK2Q14410 553 aaPredicted RBP11.08□□□□□ -0.64
TGFB3-204ENST00000556285 MPPED2Q15777 294 aa11.08□□□□□ -0.64
TGFB3-204ENST00000556285 RFX4Q33E94 735 aa11.08□□□□□ -0.64
TGFB3-204ENST00000556285 PRAMEF6Q5VXH4 476 aa11.08□□□□□ -0.64
TGFB3-204ENST00000556285 SHISA2Q6UWI4 295 aa11.08□□□□□ -0.64
TGFB3-204ENST00000556285 LRRN1Q6UXK5 716 aa11.08□□□□□ -0.64
TGFB3-204ENST00000556285 BRD3OSQ6XYD6 125 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms