RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 PIPP12273 146 aaPredicted RBP6.6□□□□□ -1.35
TDP1-214ENST00000556063 BMP4P12644 408 aa6.6□□□□□ -1.35
TDP1-214ENST00000556063 CCL2P13500 99 aa6.6□□□□□ -1.35
TDP1-214ENST00000556063 LOXP28300 417 aaPredicted RBP6.6□□□□□ -1.35
TDP1-214ENST00000556063 GCH1P30793 250 aa6.6□□□□□ -1.35
TDP1-214ENST00000556063 CALCRP30988 508 aa6.6□□□□□ -1.35
TDP1-214ENST00000556063 APOBEC3AP31941 199 aaPredicted RBP6.6□□□□□ -1.35
TDP1-214ENST00000556063 OPRL1P41146 370 aa6.6□□□□□ -1.35
TDP1-214ENST00000556063 PRKXP51817 358 aa6.6□□□□□ -1.35
TDP1-214ENST00000556063 HCCSP53701 268 aa6.6□□□□□ -1.35
TDP1-214ENST00000556063 UCP2P55851 309 aa6.6□□□□□ -1.35
TDP1-214ENST00000556063 PPP1CBP62140 327 aa6.6□□□□□ -1.35
TDP1-214ENST00000556063 ACTA2P62736 377 aa6.6□□□□□ -1.35
TDP1-214ENST00000556063 ACTG2P63267 376 aa6.6□□□□□ -1.35
TDP1-214ENST00000556063 HGFACQ04756 655 aa6.6□□□□□ -1.35
TDP1-214ENST00000556063 SPOCK1Q08629 439 aa6.6□□□□□ -1.35
TDP1-214ENST00000556063 MALLQ13021 153 aa6.6□□□□□ -1.35
TDP1-214ENST00000556063 MRPL28Q13084 256 aaKnown RBP6.6□□□□□ -1.35
TDP1-214ENST00000556063 SMN1Q16637 294 aaKnown RBP6.6□□□□□ -1.35
TDP1-214ENST00000556063 MOGQ16653 247 aa6.6□□□□□ -1.35
TDP1-214ENST00000556063 ZNF718Q3SXZ3 478 aa6.6□□□□□ -1.35
TDP1-214ENST00000556063 ZNF672Q499Z4 452 aaPredicted RBP6.6□□□□□ -1.35
TDP1-214ENST00000556063 AGAP6Q5VW22 663 aa6.6□□□□□ -1.35
TDP1-214ENST00000556063 ZNF787Q6DD87 383 aa6.6□□□□□ -1.35
TDP1-214ENST00000556063 RGS7BPQ6MZT1 257 aaPredicted RBP6.6□□□□□ -1.35
TDP1-214ENST00000556063 VHLLQ6RSH7 139 aa6.6□□□□□ -1.35
TDP1-214ENST00000556063 LRRN1Q6UXK5 716 aa6.6□□□□□ -1.35
TDP1-214ENST00000556063 TMPRSS11AQ6ZMR5 421 aa6.6□□□□□ -1.35
TDP1-214ENST00000556063 C20orf204Q6ZNR8 217 aa6.6□□□□□ -1.35
TDP1-214ENST00000556063 MYPOPQ86VE0 399 aaPredicted RBP6.6□□□□□ -1.35
TDP1-214ENST00000556063 ZNF295-AS1Q8N0V1 137 aa6.6□□□□□ -1.35
TDP1-214ENST00000556063 FBXL14Q8N1E6 418 aa6.6□□□□□ -1.35
TDP1-214ENST00000556063 STX19Q8N4C7 294 aa6.6□□□□□ -1.35
TDP1-214ENST00000556063 ZNF611Q8N823 705 aa6.6□□□□□ -1.35
TDP1-214ENST00000556063 YIPF7Q8N8F6 280 aa6.6□□□□□ -1.35
TDP1-214ENST00000556063 ZNF540Q8NDQ6 660 aa6.6□□□□□ -1.35
TDP1-214ENST00000556063 KBTBD8Q8NFY9 601 aa6.6□□□□□ -1.35
TDP1-214ENST00000556063 OR52H1Q8NGJ2 320 aa6.6□□□□□ -1.35
TDP1-214ENST00000556063 OR10S1Q8NGN2 331 aa6.6□□□□□ -1.35
TDP1-214ENST00000556063 OR1J1Q8NGS3 322 aa6.6□□□□□ -1.35
TDP1-214ENST00000556063 ABHD4Q8TB40 342 aa6.6□□□□□ -1.35
TDP1-214ENST00000556063 HAVCR2Q8TDQ0 301 aa6.6□□□□□ -1.35
TDP1-214ENST00000556063 TMEM80Q96HE8 168 aa6.6□□□□□ -1.35
TDP1-214ENST00000556063 TBX5Q99593 518 aa6.6□□□□□ -1.35
TDP1-214ENST00000556063 FGF20Q9NP95 211 aaPredicted RBP6.6□□□□□ -1.35
TDP1-214ENST00000556063 PNRC2Q9NPJ4 139 aaKnown RBP6.6□□□□□ -1.35
TDP1-214ENST00000556063 CA10Q9NS85 328 aa6.6□□□□□ -1.35
TDP1-214ENST00000556063 GPR160Q9UJ42 338 aa6.6□□□□□ -1.35
TDP1-214ENST00000556063 EXOSC1Q9Y3B2 195 aaKnown RBP6.6□□□□□ -1.35
TDP1-214ENST00000556063 CMAHPQ9Y471 501 aa6.6□□□□□ -1.35
TDP1-214ENST00000556063 NOTCH2Q04721 2471 aa6.59□□□□□ -1.35
TDP1-214ENST00000556063 E7EQL1 145 aa6.59□□□□□ -1.35
TDP1-214ENST00000556063 PTGES3LE9PB15 166 aa6.59□□□□□ -1.35
TDP1-214ENST00000556063 SLC1A7O00341 560 aa6.59□□□□□ -1.35
TDP1-214ENST00000556063 SMPD2O60906 423 aa6.59□□□□□ -1.35
TDP1-214ENST00000556063 ATE1O95260 518 aa6.59□□□□□ -1.35
TDP1-214ENST00000556063 PLAUP00749 431 aa6.59□□□□□ -1.35
TDP1-214ENST00000556063 IGHA1P01876 353 aa6.59□□□□□ -1.35
TDP1-214ENST00000556063 MT-ND5P03915 603 aa6.59□□□□□ -1.35
TDP1-214ENST00000556063 ANXA2P07355 339 aaKnown RBP6.59□□□□□ -1.35
TDP1-214ENST00000556063 DBHP09172 617 aa6.59□□□□□ -1.35
TDP1-214ENST00000556063 ACSM4P0C7M7 580 aa6.59□□□□□ -1.35
TDP1-214ENST00000556063 CFL1P23528 166 aaKnown RBP6.59□□□□□ -1.35
TDP1-214ENST00000556063 OTX1P32242 354 aaPredicted RBP6.59□□□□□ -1.35
TDP1-214ENST00000556063 SERPINF1P36955 418 aa6.59□□□□□ -1.35
TDP1-214ENST00000556063 CX3CR1P49238 355 aa6.59□□□□□ -1.35
TDP1-214ENST00000556063 FABP6P51161 128 aa6.59□□□□□ -1.35
TDP1-214ENST00000556063 PSMA6P60900 246 aaKnown RBP6.59□□□□□ -1.35
TDP1-214ENST00000556063 NKX6-1P78426 367 aaPredicted RBP6.59□□□□□ -1.35
TDP1-214ENST00000556063 ST3GAL4Q11206 333 aa6.59□□□□□ -1.35
TDP1-214ENST00000556063 GALEQ14376 348 aa6.59□□□□□ -1.35
TDP1-214ENST00000556063 KRTAP27-1Q3LI81 207 aa6.59□□□□□ -1.35
TDP1-214ENST00000556063 RBM48Q5RL73 367 aaKnown RBP6.59□□□□□ -1.35
TDP1-214ENST00000556063 AHSA2Q719I0 299 aa6.59□□□□□ -1.35
TDP1-214ENST00000556063 SYS1Q8N2H4 156 aa6.59□□□□□ -1.35
TDP1-214ENST00000556063 ZNF786Q8N393 782 aa6.59□□□□□ -1.35
TDP1-214ENST00000556063 OR52I1Q8NGK6 324 aa6.59□□□□□ -1.35
TDP1-214ENST00000556063 SMAP2Q8WU79 429 aaPredicted RBP6.59□□□□□ -1.35
TDP1-214ENST00000556063 SLC7A6Q92536 515 aa6.59□□□□□ -1.35
TDP1-214ENST00000556063 ITFG2Q969R8 447 aa6.59□□□□□ -1.35
TDP1-214ENST00000556063 PGAM5Q96HS1 289 aa6.59□□□□□ -1.35
TDP1-214ENST00000556063 AMELYQ99218 206 aa6.59□□□□□ -1.35
TDP1-214ENST00000556063 DOK1Q99704 481 aa6.59□□□□□ -1.35
TDP1-214ENST00000556063 ALG8Q9BVK2 526 aa6.59□□□□□ -1.35
TDP1-214ENST00000556063 JAM3Q9BX67 310 aa6.59□□□□□ -1.35
TDP1-214ENST00000556063 C1QTNF5Q9BXJ0 243 aa6.59□□□□□ -1.35
TDP1-214ENST00000556063 YTHDF1Q9BYJ9 559 aaKnown RBP6.59□□□□□ -1.35
TDP1-214ENST00000556063 OR10A2Q9H208 303 aa6.59□□□□□ -1.35
TDP1-214ENST00000556063 OR51B6Q9H340 312 aa6.59□□□□□ -1.35
TDP1-214ENST00000556063 RGCCQ9H4X1 137 aa6.59□□□□□ -1.35
TDP1-214ENST00000556063 OPA3Q9H6K4 179 aa6.59□□□□□ -1.35
TDP1-214ENST00000556063 MOB1AQ9H8S9 216 aa6.59□□□□□ -1.35
TDP1-214ENST00000556063 UBTD1Q9HAC8 227 aa6.59□□□□□ -1.35
TDP1-214ENST00000556063 ERVK13-1Q9NX77 482 aa6.59□□□□□ -1.35
TDP1-214ENST00000556063 SLCO1C1Q9NYB5 712 aa6.59□□□□□ -1.35
TDP1-214ENST00000556063 PSORS1C1Q9UIG5 152 aa6.59□□□□□ -1.35
TDP1-214ENST00000556063 ZNF391Q9UJN7 358 aa6.59□□□□□ -1.35
TDP1-214ENST00000556063 DIMT1Q9UNQ2 313 aaKnown RBP6.59□□□□□ -1.35
TDP1-214ENST00000556063 COPS3Q9UNS2 423 aa6.59□□□□□ -1.35
TDP1-214ENST00000556063 KLHDC2Q9Y2U9 406 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms