RNA–Protein interactions for RNA: ENST00000555872.5

EFCAB11-208, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-208ENST00000555872 DOK5Q9P104 306 aa9.33□□□□□ -0.92
EFCAB11-208ENST00000555872 PRODH2Q9UF12 536 aa9.33□□□□□ -0.92
EFCAB11-208ENST00000555872 ZNF106Q9H2Y7 1883 aaKnown RBP9.32□□□□□ -0.92
EFCAB11-208ENST00000555872 MYO16Q9Y6X6 1858 aa9.32□□□□□ -0.92
EFCAB11-208ENST00000555872 GREB1Q4ZG55 1949 aa9.32□□□□□ -0.92
EFCAB11-208ENST00000555872 CDHR4A6H8M9 788 aa9.32□□□□□ -0.92
EFCAB11-208ENST00000555872 RNF222A6NCQ9 220 aa9.32□□□□□ -0.92
EFCAB11-208ENST00000555872 FBLL1A6NHQ2 334 aaKnown RBP9.32□□□□□ -0.92
EFCAB11-208ENST00000555872 CPSF4LA6NMK7 179 aaKnown RBP9.32□□□□□ -0.92
EFCAB11-208ENST00000555872 RAMP3O60896 148 aa9.32□□□□□ -0.92
EFCAB11-208ENST00000555872 B4GALT2O60909 372 aa9.32□□□□□ -0.92
EFCAB11-208ENST00000555872 CLDN11O75508 207 aa9.32□□□□□ -0.92
EFCAB11-208ENST00000555872 ARL6IP5O75915 188 aa9.32□□□□□ -0.92
EFCAB11-208ENST00000555872 EPPINO95925 133 aa9.32□□□□□ -0.92
EFCAB11-208ENST00000555872 HNRNPA1P09651 372 aaKnown RBP eCLIP9.32□□□□□ -0.92
EFCAB11-208ENST00000555872 CDK2P24941 298 aa9.32□□□□□ -0.92
EFCAB11-208ENST00000555872 MPZP25189 248 aa9.32□□□□□ -0.92
EFCAB11-208ENST00000555872 MANFP55145 182 aaKnown RBP9.32□□□□□ -0.92
EFCAB11-208ENST00000555872 NRG3P56975 720 aa9.32□□□□□ -0.92
EFCAB11-208ENST00000555872 CXADRP78310 365 aa9.32□□□□□ -0.92
EFCAB11-208ENST00000555872 B4GALNT1Q00973 533 aa9.32□□□□□ -0.92
EFCAB11-208ENST00000555872 ZNF234Q14588 700 aa9.32□□□□□ -0.92
EFCAB11-208ENST00000555872 TMEM177Q53S58 311 aa9.32□□□□□ -0.92
EFCAB11-208ENST00000555872 STPG1Q5TH74 334 aa9.32□□□□□ -0.92
EFCAB11-208ENST00000555872 RTL6Q6ICC9 239 aa9.32□□□□□ -0.92
EFCAB11-208ENST00000555872 OR52E1Q8NGJ3 308 aa9.32□□□□□ -0.92
EFCAB11-208ENST00000555872 TMEM45BQ96B21 275 aa9.32□□□□□ -0.92
EFCAB11-208ENST00000555872 SPSB1Q96BD6 273 aa9.32□□□□□ -0.92
EFCAB11-208ENST00000555872 PINX1Q96BK5 328 aaKnown RBP9.32□□□□□ -0.92
EFCAB11-208ENST00000555872 SMIM8Q96KF7 97 aa9.32□□□□□ -0.92
EFCAB11-208ENST00000555872 POM121L2Q96KW2 1035 aa9.32□□□□□ -0.92
EFCAB11-208ENST00000555872 SLC25A18Q9H1K4 315 aa9.32□□□□□ -0.92
EFCAB11-208ENST00000555872 HAO2Q9NYQ3 351 aa9.32□□□□□ -0.92
EFCAB11-208ENST00000555872 MTCH1Q9NZJ7 389 aa9.32□□□□□ -0.92
EFCAB11-208ENST00000555872 CYP8B1Q9UNU6 501 aa9.32□□□□□ -0.92
EFCAB11-208ENST00000555872 VWA8A3KMH1 1905 aa9.32□□□□□ -0.92
EFCAB11-208ENST00000555872 OR5H15A6NDH6 313 aa9.32□□□□□ -0.92
EFCAB11-208ENST00000555872 OR5H1A6NKK0 313 aa9.32□□□□□ -0.92
EFCAB11-208ENST00000555872 RPL36A-HNRNPH2H7BZ11 118 aa9.32□□□□□ -0.92
EFCAB11-208ENST00000555872 SIVA1O15304 175 aa9.32□□□□□ -0.92
EFCAB11-208ENST00000555872 FGF16O43320 207 aa9.32□□□□□ -0.92
EFCAB11-208ENST00000555872 RHOCP08134 193 aa9.32□□□□□ -0.92
EFCAB11-208ENST00000555872 RPL29P47914 159 aaKnown RBP9.32□□□□□ -0.92
EFCAB11-208ENST00000555872 HGFACQ04756 655 aa9.32□□□□□ -0.92
EFCAB11-208ENST00000555872 LYPLAL1Q5VWZ2 237 aa9.32□□□□□ -0.92
EFCAB11-208ENST00000555872 DMKNQ6E0U4 476 aaPredicted RBP9.32□□□□□ -0.92
EFCAB11-208ENST00000555872 MEPCEQ7L2J0 689 aaKnown RBP9.32□□□□□ -0.92
EFCAB11-208ENST00000555872 OR2T33Q8NG76 320 aa9.32□□□□□ -0.92
EFCAB11-208ENST00000555872 SLC41A3Q96GZ6 507 aa9.32□□□□□ -0.92
EFCAB11-208ENST00000555872 TP53RKQ96S44 253 aa9.32□□□□□ -0.92
EFCAB11-208ENST00000555872 SLITRK2Q9H156 845 aa9.32□□□□□ -0.92
EFCAB11-208ENST00000555872 RPS10P5Q9NQ39 176 aa9.32□□□□□ -0.92
EFCAB11-208ENST00000555872 MSRAQ9UJ68 235 aa9.32□□□□□ -0.92
EFCAB11-208ENST00000555872 FOXJ3Q9UPW0 622 aa9.32□□□□□ -0.92
EFCAB11-208ENST00000555872 A0A1W2PR48 441 aa9.31□□□□□ -0.92
EFCAB11-208ENST00000555872 GGT3PA6NGU5 568 aa9.31□□□□□ -0.92
EFCAB11-208ENST00000555872 SOD3P08294 240 aa9.31□□□□□ -0.92
EFCAB11-208ENST00000555872 FABP4P15090 132 aa9.31□□□□□ -0.92
EFCAB11-208ENST00000555872 BCKDHBP21953 392 aa9.31□□□□□ -0.92
EFCAB11-208ENST00000555872 PSMB5P28074 263 aa9.31□□□□□ -0.92
EFCAB11-208ENST00000555872 RAB7AP51149 207 aa9.31□□□□□ -0.92
EFCAB11-208ENST00000555872 ERVFC1-1P60608 527 aa9.31□□□□□ -0.92
EFCAB11-208ENST00000555872 ST8SIA6P61647 398 aa9.31□□□□□ -0.92
EFCAB11-208ENST00000555872 ZNF345Q14585 488 aa9.31□□□□□ -0.92
EFCAB11-208ENST00000555872 TMEM249Q2WGJ8 235 aa9.31□□□□□ -0.92
EFCAB11-208ENST00000555872 LDLRAD2Q5SZI1 272 aa9.31□□□□□ -0.92
EFCAB11-208ENST00000555872 C11orf87Q6NUJ2 197 aa9.31□□□□□ -0.92
EFCAB11-208ENST00000555872 NIPAL3Q6P499 406 aa9.31□□□□□ -0.92
EFCAB11-208ENST00000555872 AGTRAPQ6RW13 159 aa9.31□□□□□ -0.92
EFCAB11-208ENST00000555872 ACOT7LQ6ZUV0 252 aa9.31□□□□□ -0.92
EFCAB11-208ENST00000555872 HIST3H2BBQ8N257 126 aa9.31□□□□□ -0.92
EFCAB11-208ENST00000555872 STEAP2Q8NFT2 490 aa9.31□□□□□ -0.92
EFCAB11-208ENST00000555872 OR13C8Q8NGS7 320 aa9.31□□□□□ -0.92
EFCAB11-208ENST00000555872 NEIL2Q969S2 332 aa9.31□□□□□ -0.92
EFCAB11-208ENST00000555872 HRH4Q9H3N8 390 aa9.31□□□□□ -0.92
EFCAB11-208ENST00000555872 COMMD9Q9P000 198 aa9.31□□□□□ -0.92
EFCAB11-208ENST00000555872 TRAV34A0A0B4J273 112 aa9.31□□□□□ -0.92
EFCAB11-208ENST00000555872 PROB1E7EW31 1015 aa9.31□□□□□ -0.92
EFCAB11-208ENST00000555872 H7C417 338 aa9.31□□□□□ -0.92
EFCAB11-208ENST00000555872 PRICKLE3O43900 615 aaPredicted RBP9.31□□□□□ -0.92
EFCAB11-208ENST00000555872 SLCO2B1O94956 709 aa9.31□□□□□ -0.92
EFCAB11-208ENST00000555872 SFTA3P0C7M3 94 aa9.31□□□□□ -0.92
EFCAB11-208ENST00000555872 GZMBP10144 247 aa9.31□□□□□ -0.92
EFCAB11-208ENST00000555872 ACRP10323 421 aa9.31□□□□□ -0.92
EFCAB11-208ENST00000555872 FAUP35544 74 aaKnown RBP9.31□□□□□ -0.92
EFCAB11-208ENST00000555872 CASRP41180 1078 aa9.31□□□□□ -0.92
EFCAB11-208ENST00000555872 TAS2R43P59537 309 aa9.31□□□□□ -0.92
EFCAB11-208ENST00000555872 RHOAP61586 193 aa9.31□□□□□ -0.92
EFCAB11-208ENST00000555872 CSNK1G2P78368 415 aa9.31□□□□□ -0.92
EFCAB11-208ENST00000555872 PRRT3Q5FWE3 981 aa9.31□□□□□ -0.92
EFCAB11-208ENST00000555872 TMED4Q7Z7H5 227 aa9.31□□□□□ -0.92
EFCAB11-208ENST00000555872 PARGQ86W56 976 aa9.31□□□□□ -0.92
EFCAB11-208ENST00000555872 OR4S1Q8NGB4 309 aa9.31□□□□□ -0.92
EFCAB11-208ENST00000555872 PIGXQ8TBF5 258 aa9.31□□□□□ -0.92
EFCAB11-208ENST00000555872 TMED6Q8WW62 240 aa9.31□□□□□ -0.92
EFCAB11-208ENST00000555872 FAM110AQ9BQ89 295 aa9.31□□□□□ -0.92
EFCAB11-208ENST00000555872 APMAPQ9HDC9 416 aa9.31□□□□□ -0.92
EFCAB11-208ENST00000555872 MMP26Q9NRE1 261 aa9.31□□□□□ -0.92
EFCAB11-208ENST00000555872 SEMA4GQ9NTN9 838 aa9.31□□□□□ -0.92
EFCAB11-208ENST00000555872 RFNGQ9Y644 331 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms