RNA–Protein interactions for RNA: ENST00000555550.1

SCFD1-216, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-216ENST00000555550 TSPOAP1O95153 1857 aa1.41□□□□□ -2.18
SCFD1-216ENST00000555550 DENND4AQ7Z401 1863 aa1.41□□□□□ -2.18
SCFD1-216ENST00000555550 THADAQ6YHU6 1953 aa1.41□□□□□ -2.18
SCFD1-216ENST00000555550 H7C417 338 aa1.41□□□□□ -2.18
SCFD1-216ENST00000555550 KLHL41O60662 606 aa1.41□□□□□ -2.18
SCFD1-216ENST00000555550 IGLV7-43P04211 117 aa1.41□□□□□ -2.18
SCFD1-216ENST00000555550 ACSM4P0C7M7 580 aa1.41□□□□□ -2.18
SCFD1-216ENST00000555550 TCP1P17987 556 aaKnown RBP1.41□□□□□ -2.18
SCFD1-216ENST00000555550 GLRA2P23416 452 aa1.41□□□□□ -2.18
SCFD1-216ENST00000555550 TALDO1P37837 337 aa1.41□□□□□ -2.18
SCFD1-216ENST00000555550 PLP1P60201 277 aa1.41□□□□□ -2.18
SCFD1-216ENST00000555550 RPS23P62266 143 aaKnown RBP1.41□□□□□ -2.18
SCFD1-216ENST00000555550 TNFRSF9Q07011 255 aa1.41□□□□□ -2.18
SCFD1-216ENST00000555550 PPIDQ08752 370 aaKnown RBP1.41□□□□□ -2.18
SCFD1-216ENST00000555550 NIPA1Q7RTP0 329 aa1.41□□□□□ -2.18
SCFD1-216ENST00000555550 MRPL55Q7Z7F7 128 aaKnown RBP1.41□□□□□ -2.18
SCFD1-216ENST00000555550 EGFL6Q8IUX8 553 aa1.41□□□□□ -2.18
SCFD1-216ENST00000555550 OR1J4Q8NGS1 313 aa1.41□□□□□ -2.18
SCFD1-216ENST00000555550 GPR151Q8TDV0 419 aa1.41□□□□□ -2.18
SCFD1-216ENST00000555550 TBC1D31Q96DN5 1066 aa1.41□□□□□ -2.18
SCFD1-216ENST00000555550 GPR82Q96P67 336 aa1.41□□□□□ -2.18
SCFD1-216ENST00000555550 TMEM27Q9HBJ8 222 aa1.41□□□□□ -2.18
SCFD1-216ENST00000555550 PARP11Q9NR21 331 aa1.41□□□□□ -2.18
SCFD1-216ENST00000555550 MTFP1Q9UDX5 166 aa1.41□□□□□ -2.18
SCFD1-216ENST00000555550 SUN2Q9UH99 717 aa1.41□□□□□ -2.18
SCFD1-216ENST00000555550 TENM1Q9UKZ4 2725 aa1.41□□□□□ -2.18
SCFD1-216ENST00000555550 NDC80O14777 642 aa1.4□□□□□ -2.19
SCFD1-216ENST00000555550 FKBP6O75344 327 aa1.4□□□□□ -2.19
SCFD1-216ENST00000555550 ZNF35P13682 527 aa1.4□□□□□ -2.19
SCFD1-216ENST00000555550 HRES1P13985 223 aa1.4□□□□□ -2.19
SCFD1-216ENST00000555550 MX1P20591 662 aa1.4□□□□□ -2.19
SCFD1-216ENST00000555550 NTF3P20783 257 aa1.4□□□□□ -2.19
SCFD1-216ENST00000555550 U2AF2P26368 475 aaKnown RBP eCLIP1.4□□□□□ -2.19
SCFD1-216ENST00000555550 FOXN2P32314 431 aa1.4□□□□□ -2.19
SCFD1-216ENST00000555550 UBE2E1P51965 193 aa1.4□□□□□ -2.19
SCFD1-216ENST00000555550 CRISP1P54107 249 aa1.4□□□□□ -2.19
SCFD1-216ENST00000555550 VPS26BQ4G0F5 336 aa1.4□□□□□ -2.19
SCFD1-216ENST00000555550 SOHLH1Q5JUK2 328 aa1.4□□□□□ -2.19
SCFD1-216ENST00000555550 MBOAT1Q6ZNC8 495 aa1.4□□□□□ -2.19
SCFD1-216ENST00000555550 NT5DC3Q86UY8 548 aa1.4□□□□□ -2.19
SCFD1-216ENST00000555550 ZNF645Q8N7E2 425 aa1.4□□□□□ -2.19
SCFD1-216ENST00000555550 SPATA4Q8NEY3 305 aa1.4□□□□□ -2.19
SCFD1-216ENST00000555550 OR52M1Q8NGK5 317 aa1.4□□□□□ -2.19
SCFD1-216ENST00000555550 OR10G6Q8NH81 332 aa1.4□□□□□ -2.19
SCFD1-216ENST00000555550 EEF1AKMT3Q96AZ1 226 aa1.4□□□□□ -2.19
SCFD1-216ENST00000555550 TMEM159Q96B96 161 aa1.4□□□□□ -2.19
SCFD1-216ENST00000555550 GON7Q9BXV9 100 aa1.4□□□□□ -2.19
SCFD1-216ENST00000555550 TAS2R1Q9NYW7 299 aa1.4□□□□□ -2.19
SCFD1-216ENST00000555550 CACNA1DQ01668 2161 aa1.4□□□□□ -2.19
SCFD1-216ENST00000555550 KANK1Q14678 1352 aa1.39□□□□□ -2.19
SCFD1-216ENST00000555550 SMIM26A0A096LP01 95 aa1.39□□□□□ -2.19
SCFD1-216ENST00000555550 IGKV1-8A0A0C4DH67 115 aa1.39□□□□□ -2.19
SCFD1-216ENST00000555550 C4orf51C9J302 202 aa1.39□□□□□ -2.19
SCFD1-216ENST00000555550 PRAMEF26H0Y7S4 382 aa1.39□□□□□ -2.19
SCFD1-216ENST00000555550 NSG1P42857 185 aa1.39□□□□□ -2.19
SCFD1-216ENST00000555550 ARFIP1P53367 373 aa1.39□□□□□ -2.19
SCFD1-216ENST00000555550 CDH6P55285 790 aa1.39□□□□□ -2.19
SCFD1-216ENST00000555550 PRR3P79522 188 aaKnown RBP1.39□□□□□ -2.19
SCFD1-216ENST00000555550 SIGLEC14Q08ET2 396 aa1.39□□□□□ -2.19
SCFD1-216ENST00000555550 BIKQ13323 160 aa1.39□□□□□ -2.19
SCFD1-216ENST00000555550 ZNF726P1Q15940 193 aa1.39□□□□□ -2.19
SCFD1-216ENST00000555550 PYDC2Q56P42 97 aa1.39□□□□□ -2.19
SCFD1-216ENST00000555550 UBE2UQ5VVX9 321 aa1.39□□□□□ -2.19
SCFD1-216ENST00000555550 DEGS2Q6QHC5 323 aa1.39□□□□□ -2.19
SCFD1-216ENST00000555550 TBPL2Q6SJ96 375 aa1.39□□□□□ -2.19
SCFD1-216ENST00000555550 ERO1BQ86YB8 467 aa1.39□□□□□ -2.19
SCFD1-216ENST00000555550 STK40Q8N2I9 435 aa1.39□□□□□ -2.19
SCFD1-216ENST00000555550 GTPBP8Q8N3Z3 284 aaPredicted RBP1.39□□□□□ -2.19
SCFD1-216ENST00000555550 NPWQ8N729 165 aa1.39□□□□□ -2.19
SCFD1-216ENST00000555550 OR4M1Q8NGD0 313 aa1.39□□□□□ -2.19
SCFD1-216ENST00000555550 CPNE4Q96A23 557 aaPredicted RBP1.39□□□□□ -2.19
SCFD1-216ENST00000555550 UXTQ9UBK9 157 aaPredicted RBP1.39□□□□□ -2.19
SCFD1-216ENST00000555550 BLOC1S6Q9UL45 172 aa1.39□□□□□ -2.19
SCFD1-216ENST00000555550 GPR98Q8WXG9 6306 aa1.38□□□□□ -2.19
SCFD1-216ENST00000555550 IGHV1-69DA0A0B4J2H0 117 aa1.38□□□□□ -2.19
SCFD1-216ENST00000555550 A0A1B0GUH1 482 aa1.38□□□□□ -2.19
SCFD1-216ENST00000555550 SPAG6O75602 509 aa1.38□□□□□ -2.19
SCFD1-216ENST00000555550 RPN2P04844 631 aa1.38□□□□□ -2.19
SCFD1-216ENST00000555550 TNNI1P19237 187 aa1.38□□□□□ -2.19
SCFD1-216ENST00000555550 HNRNPH3P31942 346 aaKnown RBP1.38□□□□□ -2.19
SCFD1-216ENST00000555550 TMED10P49755 219 aaKnown RBP1.38□□□□□ -2.19
SCFD1-216ENST00000555550 STXBP1P61764 594 aaKnown RBP1.38□□□□□ -2.19
SCFD1-216ENST00000555550 UBE2HP62256 183 aa1.38□□□□□ -2.19
SCFD1-216ENST00000555550 BST2Q10589 180 aaKnown RBP1.38□□□□□ -2.19
SCFD1-216ENST00000555550 IL24Q13007 206 aa1.38□□□□□ -2.19
SCFD1-216ENST00000555550 DGCR6Q14129 220 aa1.38□□□□□ -2.19
SCFD1-216ENST00000555550 ZNF266Q14584 549 aa1.38□□□□□ -2.19
SCFD1-216ENST00000555550 NCF4Q15080 339 aa1.38□□□□□ -2.19
SCFD1-216ENST00000555550 RUFY3Q7L099 469 aa1.38□□□□□ -2.19
SCFD1-216ENST00000555550 CBR4Q8N4T8 237 aa1.38□□□□□ -2.19
SCFD1-216ENST00000555550 PRELID2Q8N945 189 aa1.38□□□□□ -2.19
SCFD1-216ENST00000555550 CMTM2Q8TAZ6 248 aa1.38□□□□□ -2.19
SCFD1-216ENST00000555550 APH1BQ8WW43 257 aa1.38□□□□□ -2.19
SCFD1-216ENST00000555550 PKMYT1Q99640 499 aa1.38□□□□□ -2.19
SCFD1-216ENST00000555550 SLC29A1Q99808 456 aa1.38□□□□□ -2.19
SCFD1-216ENST00000555550 MYOZ1Q9NP98 299 aaPredicted RBP1.38□□□□□ -2.19
SCFD1-216ENST00000555550 MED4Q9NPJ6 270 aa1.38□□□□□ -2.19
SCFD1-216ENST00000555550 HRASLS2Q9NWW9 162 aa1.38□□□□□ -2.19
SCFD1-216ENST00000555550 BAZ2AQ9UIF9 1905 aaKnown RBP1.38□□□□□ -2.19
SCFD1-216ENST00000555550 A0A0J9YXV3 536 aa1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms