RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 LRP5LA4QPB2 252 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 OR6C74A6NCV1 312 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 FAM166BA8MTA8 275 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 E7EQ34 232 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 K7N7A8 449 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 DFFAO00273 331 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 UBFD1O14562 309 aaKnown RBP1.07□□□□□ -2.24
PRPF39-208ENST00000554785 TAPBPO15533 448 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 PRKYO43930 277 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 CLDN11O75508 207 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 KLF7O75840 302 aaPredicted RBP1.07□□□□□ -2.24
PRPF39-208ENST00000554785 CLDN9O95484 217 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 TSPAN12O95859 305 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 ZNF19P17023 458 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 ZNF24P17028 368 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 NELFEP18615 380 aaKnown RBP1.07□□□□□ -2.24
PRPF39-208ENST00000554785 AQP1P29972 269 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 SPAM1P38567 509 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 PRPHP41219 470 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 PRKXP51817 358 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 HNRNPA3P51991 378 aaKnown RBP1.07□□□□□ -2.24
PRPF39-208ENST00000554785 PLK1P53350 603 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 CDH4P55283 916 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 ACTG1P63261 375 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 SPIBQ01892 262 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 ZNF45Q02386 682 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 RAD51Q06609 339 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 TFF3Q07654 80 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 XRCC4Q13426 336 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 GANABQ14697 944 aaKnown RBP1.07□□□□□ -2.24
PRPF39-208ENST00000554785 ZNF79Q15937 498 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 TRIM16LQ309B1 348 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 SLC25A52Q3SY17 297 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 TP53I3Q53FA7 332 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 SPATA46Q5T0L3 261 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 LRRC66Q68CR7 880 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 ZNF544Q6NX49 715 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 LRRC31Q6UY01 552 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 C12orf54Q6X4T0 127 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 FAM183BPQ6ZVS7 135 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 LUZP2Q86TE4 346 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 UNC93AQ86WB7 457 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 DOLPP1Q86YN1 238 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 CCDC50Q8IVM0 306 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 CCDC65Q8IXS2 484 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 ZNF100Q8IYN0 542 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 ZNF683Q8IZ20 524 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 CLEC4FQ8N1N0 589 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 SVOPLQ8N434 492 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 C2orf73Q8N5S3 287 aaPredicted RBP1.07□□□□□ -2.24
PRPF39-208ENST00000554785 ARL6IP6Q8N6S5 226 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 ZNF557Q8N988 423 aaPredicted RBP1.07□□□□□ -2.24
PRPF39-208ENST00000554785 BBS1Q8NFJ9 593 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 OR2L5Q8NG80 312 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 OR9A1PQ8NGU1 263 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 OR1F12Q8NHA8 337 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 MARC2Q969Z3 335 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 CXorf40BQ96DE9 158 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 ZNF514Q96K75 400 aaPredicted RBP1.07□□□□□ -2.24
PRPF39-208ENST00000554785 TECTBQ96PL2 329 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 CCL19Q99731 98 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 TXN2Q99757 166 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 SLC35A5Q9BS91 424 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 NIPSNAP3BQ9BS92 247 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 ZSCAN5AQ9BUG6 496 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 OR2AG1Q9H205 316 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 XKR8Q9H6D3 395 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 KCNJ16Q9NPI9 418 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 PLSCR3Q9NRY6 295 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 NUDT15Q9NV35 164 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 HRASLS2Q9NWW9 162 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 STMN3Q9NZ72 180 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 IL36GQ9NZH8 169 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 SLC23A2Q9UGH3 650 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 PCSK1NQ9UHG2 260 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 PHF11Q9UIL8 331 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 RASD1Q9Y272 281 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 ZNF256Q9Y2P7 627 aaPredicted RBP1.07□□□□□ -2.24
PRPF39-208ENST00000554785 AK6Q9Y3D8 172 aaKnown RBP1.07□□□□□ -2.24
PRPF39-208ENST00000554785 ANK2Q01484 3957 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 MED12LQ86YW9 2145 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 HEATR5BQ9P2D3 2071 aa1.07□□□□□ -2.24
PRPF39-208ENST00000554785 C15orf38-AP3S2A0A0A6YYH1 394 aa1.06□□□□□ -2.24
PRPF39-208ENST00000554785 NSG1A0A0A6YYJ2 146 aa1.06□□□□□ -2.24
PRPF39-208ENST00000554785 METTL21EPA6NDL7 271 aa1.06□□□□□ -2.24
PRPF39-208ENST00000554785 VSTM2BA6NLU5 285 aa1.06□□□□□ -2.24
PRPF39-208ENST00000554785 GPR89AB7ZAQ6 455 aa1.06□□□□□ -2.24
PRPF39-208ENST00000554785 ARPC3O15145 178 aa1.06□□□□□ -2.24
PRPF39-208ENST00000554785 ZNF264O43296 627 aa1.06□□□□□ -2.24
PRPF39-208ENST00000554785 OR10H3O60404 316 aa1.06□□□□□ -2.24
PRPF39-208ENST00000554785 DNAJB6O75190 326 aa1.06□□□□□ -2.24
PRPF39-208ENST00000554785 PALMO75781 387 aa1.06□□□□□ -2.24
PRPF39-208ENST00000554785 OR2B3O76000 313 aa1.06□□□□□ -2.24
PRPF39-208ENST00000554785 SLC25A14O95258 325 aaPredicted RBP1.06□□□□□ -2.24
PRPF39-208ENST00000554785 SOD1P00441 154 aa1.06□□□□□ -2.24
PRPF39-208ENST00000554785 IGHV3-48P01763 117 aa1.06□□□□□ -2.24
PRPF39-208ENST00000554785 CAPN1P07384 714 aa1.06□□□□□ -2.24
PRPF39-208ENST00000554785 GPR89BP0CG08 455 aa1.06□□□□□ -2.24
PRPF39-208ENST00000554785 PNMTP11086 282 aa1.06□□□□□ -2.24
PRPF39-208ENST00000554785 ZNF44P15621 663 aa1.06□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms