RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 ZNF799Q96GE5 643 aa12.52□□□□□ -0.41
SHOX2-206ENST00000554685 C4orf45Q96LM5 186 aa12.52□□□□□ -0.41
SHOX2-206ENST00000554685 DOK1Q99704 481 aa12.52□□□□□ -0.41
SHOX2-206ENST00000554685 ACTR6Q9GZN1 396 aa12.52□□□□□ -0.41
SHOX2-206ENST00000554685 KCNJ16Q9NPI9 418 aa12.52□□□□□ -0.41
SHOX2-206ENST00000554685 GTF2A1LQ9UNN4 478 aa12.52□□□□□ -0.41
SHOX2-206ENST00000554685 GRIP1Q9Y3R0 1128 aa12.52□□□□□ -0.41
SHOX2-206ENST00000554685 POLEQ07864 2286 aa12.51□□□□□ -0.41
SHOX2-206ENST00000554685 FAM90A27PA6NNH2 459 aa12.51□□□□□ -0.41
SHOX2-206ENST00000554685 F5H5K5 113 aa12.51□□□□□ -0.41
SHOX2-206ENST00000554685 SRSF10O75494 262 aaKnown RBP12.51□□□□□ -0.41
SHOX2-206ENST00000554685 C1QL1O75973 258 aa12.51□□□□□ -0.41
SHOX2-206ENST00000554685 SERPINA3P01011 423 aa12.51□□□□□ -0.41
SHOX2-206ENST00000554685 STOMP27105 288 aa12.51□□□□□ -0.41
SHOX2-206ENST00000554685 GABRA5P31644 462 aa12.51□□□□□ -0.41
SHOX2-206ENST00000554685 UGT2B10P36537 528 aa12.51□□□□□ -0.41
SHOX2-206ENST00000554685 SLC6A9P48067 706 aa12.51□□□□□ -0.41
SHOX2-206ENST00000554685 GTF2A1P52655 376 aaPredicted RBP12.51□□□□□ -0.41
SHOX2-206ENST00000554685 TUBA1BP68363 451 aa12.51□□□□□ -0.41
SHOX2-206ENST00000554685 SLC3A1Q07837 685 aa12.51□□□□□ -0.41
SHOX2-206ENST00000554685 FAM27E3Q08E93 113 aa12.51□□□□□ -0.41
SHOX2-206ENST00000554685 PPA1Q15181 289 aa12.51□□□□□ -0.41
SHOX2-206ENST00000554685 TBC1D28Q2M2D7 210 aa12.51□□□□□ -0.41
SHOX2-206ENST00000554685 KRTAP27-1Q3LI81 207 aa12.51□□□□□ -0.41
SHOX2-206ENST00000554685 TUBA1AQ71U36 451 aa12.51□□□□□ -0.41
SHOX2-206ENST00000554685 CATSPERDQ86XM0 798 aa12.51□□□□□ -0.41
SHOX2-206ENST00000554685 ZNF808Q8N4W9 903 aaPredicted RBP12.51□□□□□ -0.41
SHOX2-206ENST00000554685 ZNF676Q8N7Q3 588 aa12.51□□□□□ -0.41
SHOX2-206ENST00000554685 ZFP41Q8N8Y5 198 aa12.51□□□□□ -0.41
SHOX2-206ENST00000554685 OR5AK2Q8NH90 309 aa12.51□□□□□ -0.41
SHOX2-206ENST00000554685 RNASE6Q93091 150 aaKnown RBP12.51□□□□□ -0.41
SHOX2-206ENST00000554685 S100PBPQ96BU1 408 aa12.51□□□□□ -0.41
SHOX2-206ENST00000554685 BCL7BQ9BQE9 202 aa12.51□□□□□ -0.41
SHOX2-206ENST00000554685 FAM192AQ9GZU8 254 aa12.51□□□□□ -0.41
SHOX2-206ENST00000554685 FAM206AQ9NX38 181 aa12.51□□□□□ -0.41
SHOX2-206ENST00000554685 NUFIP1Q9UHK0 495 aaKnown RBP12.51□□□□□ -0.41
SHOX2-206ENST00000554685 OR52A1Q9UKL2 312 aa12.51□□□□□ -0.41
SHOX2-206ENST00000554685 SLC25A15Q9Y619 301 aa12.51□□□□□ -0.41
SHOX2-206ENST00000554685 IGSF10Q6WRI0 2623 aa12.5□□□□□ -0.41
SHOX2-206ENST00000554685 SPENQ96T58 3664 aaKnown RBP12.5□□□□□ -0.41
SHOX2-206ENST00000554685 PNMA8CA0A1B0GUJ8 204 aa12.5□□□□□ -0.41
SHOX2-206ENST00000554685 ZNF503-AS2A6NEH8 195 aa12.5□□□□□ -0.41
SHOX2-206ENST00000554685 J3QW42 95 aa12.5□□□□□ -0.41
SHOX2-206ENST00000554685 IGKV3-15P01624 115 aa12.5□□□□□ -0.41
SHOX2-206ENST00000554685 HLA-DPB1P04440 258 aa12.5□□□□□ -0.41
SHOX2-206ENST00000554685 ANXA2P07355 339 aaKnown RBP12.5□□□□□ -0.41
SHOX2-206ENST00000554685 UBCP0CG48 685 aaKnown RBP12.5□□□□□ -0.41
SHOX2-206ENST00000554685 GALP22466 123 aa12.5□□□□□ -0.41
SHOX2-206ENST00000554685 TGFBR2P37173 567 aa12.5□□□□□ -0.41
SHOX2-206ENST00000554685 ZNF121P58317 390 aaPredicted RBP12.5□□□□□ -0.41
SHOX2-206ENST00000554685 SSX1Q16384 188 aa12.5□□□□□ -0.41
SHOX2-206ENST00000554685 YIF1BQ5BJH7 314 aa12.5□□□□□ -0.41
SHOX2-206ENST00000554685 WDR38Q5JTN6 314 aa12.5□□□□□ -0.41
SHOX2-206ENST00000554685 TMEM244Q5VVB8 128 aa12.5□□□□□ -0.41
SHOX2-206ENST00000554685 UNQ6126/PRO20091Q6UXV3 157 aa12.5□□□□□ -0.41
SHOX2-206ENST00000554685 GDPGP1Q6ZNW5 385 aa12.5□□□□□ -0.41
SHOX2-206ENST00000554685 ANKRD13BQ86YJ7 626 aa12.5□□□□□ -0.41
SHOX2-206ENST00000554685 CLVS1Q8IUQ0 354 aaPredicted RBP12.5□□□□□ -0.41
SHOX2-206ENST00000554685 CPEB3Q8NE35 698 aaKnown RBP12.5□□□□□ -0.41
SHOX2-206ENST00000554685 SLC30A7Q8NEW0 376 aa12.5□□□□□ -0.41
SHOX2-206ENST00000554685 IL17RDQ8NFM7 739 aa12.5□□□□□ -0.41
SHOX2-206ENST00000554685 OR52H1Q8NGJ2 320 aa12.5□□□□□ -0.41
SHOX2-206ENST00000554685 ZNF420Q8TAQ5 688 aaPredicted RBP12.5□□□□□ -0.41
SHOX2-206ENST00000554685 GHSRQ92847 366 aa12.5□□□□□ -0.41
SHOX2-206ENST00000554685 PGAM5Q96HS1 289 aa12.5□□□□□ -0.41
SHOX2-206ENST00000554685 FUNDC2Q9BWH2 189 aa12.5□□□□□ -0.41
SHOX2-206ENST00000554685 PBOV1Q9GZY1 135 aa12.5□□□□□ -0.41
SHOX2-206ENST00000554685 OR10A2Q9H208 303 aa12.5□□□□□ -0.41
SHOX2-206ENST00000554685 NOX3Q9HBY0 568 aa12.5□□□□□ -0.41
SHOX2-206ENST00000554685 FRRS1LQ9P0K9 344 aa12.5□□□□□ -0.41
SHOX2-206ENST00000554685 CRNNQ9UBG3 495 aaPredicted RBP12.5□□□□□ -0.41
SHOX2-206ENST00000554685 ZNF391Q9UJN7 358 aa12.5□□□□□ -0.41
SHOX2-206ENST00000554685 STUB1Q9UNE7 303 aa12.5□□□□□ -0.41
SHOX2-206ENST00000554685 FREM1Q5H8C1 2179 aa12.5□□□□□ -0.41
SHOX2-206ENST00000554685 INTS1Q8N201 2190 aaKnown RBP12.5□□□□□ -0.41
SHOX2-206ENST00000554685 EPG5Q9HCE0 2579 aa12.49□□□□□ -0.41
SHOX2-206ENST00000554685 DPPA5A6NC42 116 aa12.49□□□□□ -0.41
SHOX2-206ENST00000554685 CCDC160A6NGH7 325 aa12.49□□□□□ -0.41
SHOX2-206ENST00000554685 OR4C45A6NMZ5 311 aa12.49□□□□□ -0.41
SHOX2-206ENST00000554685 PNPP00491 289 aa12.49□□□□□ -0.41
SHOX2-206ENST00000554685 ACSM4P0C7M7 580 aa12.49□□□□□ -0.41
SHOX2-206ENST00000554685 ZNF14P17017 642 aaPredicted RBP12.49□□□□□ -0.41
SHOX2-206ENST00000554685 APEX1P27695 318 aaKnown RBP12.49□□□□□ -0.41
SHOX2-206ENST00000554685 IDH3GP51553 393 aaPredicted RBP12.49□□□□□ -0.41
SHOX2-206ENST00000554685 TMBIM6P55061 237 aa12.49□□□□□ -0.41
SHOX2-206ENST00000554685 NANOS3P60323 173 aaKnown RBP12.49□□□□□ -0.41
SHOX2-206ENST00000554685 SORDQ00796 357 aa12.49□□□□□ -0.41
SHOX2-206ENST00000554685 MFGE8Q08431 387 aaPredicted RBP12.49□□□□□ -0.41
SHOX2-206ENST00000554685 DOC2BQ14184 412 aa12.49□□□□□ -0.41
SHOX2-206ENST00000554685 GPR107Q5VW38 600 aa12.49□□□□□ -0.41
SHOX2-206ENST00000554685 PAMR1Q6UXH9 720 aa12.49□□□□□ -0.41
SHOX2-206ENST00000554685 ELMOD2Q8IZ81 293 aa12.49□□□□□ -0.41
SHOX2-206ENST00000554685 CCDC54Q8NEL0 328 aa12.49□□□□□ -0.41
SHOX2-206ENST00000554685 RAB2BQ8WUD1 216 aa12.49□□□□□ -0.41
SHOX2-206ENST00000554685 RNF166Q96A37 237 aaPredicted RBP12.49□□□□□ -0.41
SHOX2-206ENST00000554685 POM121L2Q96KW2 1035 aa12.49□□□□□ -0.41
SHOX2-206ENST00000554685 PGLYRP3Q96LB9 341 aa12.49□□□□□ -0.41
SHOX2-206ENST00000554685 ZNF75AQ96N20 296 aa12.49□□□□□ -0.41
SHOX2-206ENST00000554685 CDH20Q9HBT6 801 aa12.49□□□□□ -0.41
SHOX2-206ENST00000554685 BRD7Q9NPI1 651 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms