RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 MMP28Q9H239 520 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 PRO1933Q9H354 126 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 SLC32A1Q9H598 525 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 ZNF160Q9HCG1 818 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 UBE2TQ9NPD8 197 aaPredicted RBP3.93□□□□□ -1.78
ATXN3-227ENST00000554491 ASIC5Q9NY37 505 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 SEMA5BQ9P283 1151 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 CD84Q9UIB8 345 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 UBQLN1Q9UMX0 589 aaKnown RBP3.93□□□□□ -1.78
ATXN3-227ENST00000554491 TMED3Q9Y3Q3 217 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 PKP3Q9Y446 797 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 PLXND1Q9Y4D7 1925 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 PCDH15Q96QU1 1955 aa3.93□□□□□ -1.78
ATXN3-227ENST00000554491 NUP210Q8TEM1 1887 aaPredicted RBP3.92□□□□□ -1.78
ATXN3-227ENST00000554491 BAZ2BQ9UIF8 2168 aaKnown RBP3.92□□□□□ -1.78
ATXN3-227ENST00000554491 PTPRDP23468 1912 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 NOTCH2Q04721 2471 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 A0A087WV48 116 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 TRAV39A0A0B4J263 110 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 FAM237BA0A1B0GVD1 139 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 FAM240BA0A1B0GVZ2 78 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 TMEM269A0A1B0GVZ9 245 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 A0A1W2PP18 115 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 TCRBV3S1A0A5B6 114 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 ELOVL7A1L3X0 281 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 LRIT2A6NDA9 550 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 GLOD5A6NK44 160 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 EFCAB9A8MZ26 197 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 ANKRD63C9JTQ0 380 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 RNASEK-C17orf49H0YIS7 233 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 TRAPPC2LH3BP13 241 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 DLGAP1O14490 977 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 UBFD1O14562 309 aaKnown RBP3.92□□□□□ -1.78
ATXN3-227ENST00000554491 CDX4O14627 284 aaPredicted RBP3.92□□□□□ -1.78
ATXN3-227ENST00000554491 EI24O14681 340 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 SNNO75324 88 aaPredicted RBP3.92□□□□□ -1.78
ATXN3-227ENST00000554491 RAD51DO75771 328 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 MT-CO2P00403 227 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 EGFP01133 1207 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 GCGP01275 180 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 THY1P04216 161 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 APODP05090 189 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 UCHL1P09936 223 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 KITP10721 976 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 IRF2P14316 349 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 UGT2B7P16662 529 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 CD22P20273 847 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 ACP1P24666 158 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 MPZP25189 248 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 BRS3P32247 399 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 SSTR5P35346 364 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 VIPR2P41587 438 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 RBM34P42696 430 aaKnown RBP3.92□□□□□ -1.78
ATXN3-227ENST00000554491 MTNR1AP48039 350 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 TTPAP49638 278 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 RGS4P49798 205 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 PPT1P50897 306 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 AQP5P55064 265 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 ATP5J2P56134 94 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 FMO1Q01740 532 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 CFHR1Q03591 330 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 MXD1Q05195 221 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 CDH18Q13634 790 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 VAMP3Q15836 100 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 PCK2Q16822 640 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 HYAL4Q2M3T9 481 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 ALKBH6Q3KRA9 238 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 MIDNQ504T8 468 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 CYBRD1Q53TN4 286 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 SYPL2Q5VXT5 272 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 NSUN5P2Q63ZY6 315 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 GLYATQ6IB77 296 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 OR52W1Q6IF63 320 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 STEAP1BQ6NZ63 245 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 TMEM88Q6PEY1 159 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 SMARCD3Q6STE5 483 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 PAMR1Q6UXH9 720 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 Q6ZPB1 254 aaPredicted RBP3.92□□□□□ -1.78
ATXN3-227ENST00000554491 Q6ZS52 159 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 CDHR3Q6ZTQ4 885 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 H1FNTQ75WM6 255 aaPredicted RBP3.92□□□□□ -1.78
ATXN3-227ENST00000554491 MEPCEQ7L2J0 689 aaKnown RBP3.92□□□□□ -1.78
ATXN3-227ENST00000554491 NUFIP2Q7Z417 695 aaKnown RBP3.92□□□□□ -1.78
ATXN3-227ENST00000554491 BCDIN3DQ7Z5W3 292 aaKnown RBP3.92□□□□□ -1.78
ATXN3-227ENST00000554491 ZNF546Q86UE3 836 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 SERPINA9Q86WD7 417 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 FUNDC1Q8IVP5 155 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 H1FOOQ8IZA3 346 aaPredicted RBP3.92□□□□□ -1.78
ATXN3-227ENST00000554491 LYG1Q8N1E2 194 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 Q8N402 240 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 C11orf42Q8N5U0 333 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 CCNYQ8ND76 341 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 OR9A4Q8NGU2 314 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 OR1S1Q8NH92 325 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 ZNF564Q8TBZ8 553 aaPredicted RBP3.92□□□□□ -1.78
ATXN3-227ENST00000554491 BRIX1Q8TDN6 353 aaKnown RBP3.92□□□□□ -1.78
ATXN3-227ENST00000554491 RNASEH2CQ8TDP1 164 aaKnown RBP3.92□□□□□ -1.78
ATXN3-227ENST00000554491 FAM3CQ92520 227 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 FCGR1BQ92637 280 aa3.92□□□□□ -1.78
ATXN3-227ENST00000554491 FGF13Q92913 245 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms