RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 KLK1P06870 262 aa8.58□□□□□ -1.04
SIX4-202ENST00000554079 FOLR1P15328 257 aa8.58□□□□□ -1.04
SIX4-202ENST00000554079 PTNP21246 168 aa8.58□□□□□ -1.04
SIX4-202ENST00000554079 CFPP27918 469 aa8.58□□□□□ -1.04
SIX4-202ENST00000554079 TFPI2P48307 235 aa8.58□□□□□ -1.04
SIX4-202ENST00000554079 TNFSF10P50591 281 aa8.58□□□□□ -1.04
SIX4-202ENST00000554079 NOVA1P51513 510 aaKnown RBP8.58□□□□□ -1.04
SIX4-202ENST00000554079 RND2P52198 227 aa8.58□□□□□ -1.04
SIX4-202ENST00000554079 NANOS3P60323 173 aaKnown RBP8.58□□□□□ -1.04
SIX4-202ENST00000554079 B4GALNT1Q00973 533 aa8.58□□□□□ -1.04
SIX4-202ENST00000554079 SPOCK1Q08629 439 aa8.58□□□□□ -1.04
SIX4-202ENST00000554079 FOXF1Q12946 379 aa8.58□□□□□ -1.04
SIX4-202ENST00000554079 HSPB3Q12988 150 aa8.58□□□□□ -1.04
SIX4-202ENST00000554079 SHHQ15465 462 aa8.58□□□□□ -1.04
SIX4-202ENST00000554079 FAM189A2Q15884 450 aa8.58□□□□□ -1.04
SIX4-202ENST00000554079 RPUSD3Q6P087 351 aaKnown RBP8.58□□□□□ -1.04
SIX4-202ENST00000554079 THSD4Q6ZMP0 1018 aa8.58□□□□□ -1.04
SIX4-202ENST00000554079 C1orf87Q8N0U7 546 aa8.58□□□□□ -1.04
SIX4-202ENST00000554079 TMEM104Q8NE00 496 aa8.58□□□□□ -1.04
SIX4-202ENST00000554079 NOXO1Q8NFA2 376 aa8.58□□□□□ -1.04
SIX4-202ENST00000554079 OR52L1Q8NGH7 329 aa8.58□□□□□ -1.04
SIX4-202ENST00000554079 SUN3Q8TAQ9 357 aa8.58□□□□□ -1.04
SIX4-202ENST00000554079 CMBLQ96DG6 245 aa8.58□□□□□ -1.04
SIX4-202ENST00000554079 CCDC74BQ96LY2 380 aa8.58□□□□□ -1.04
SIX4-202ENST00000554079 ELOVL1Q9BW60 279 aa8.58□□□□□ -1.04
SIX4-202ENST00000554079 SMDT1Q9H4I9 107 aa8.58□□□□□ -1.04
SIX4-202ENST00000554079 NEUROD4Q9HD90 331 aa8.58□□□□□ -1.04
SIX4-202ENST00000554079 MSRAQ9UJ68 235 aa8.58□□□□□ -1.04
SIX4-202ENST00000554079 OSGIN2Q9Y236 505 aa8.58□□□□□ -1.04
SIX4-202ENST00000554079 COL4A3Q01955 1670 aa8.57□□□□□ -1.04
SIX4-202ENST00000554079 LOC105371242A0A075B767 164 aa8.57□□□□□ -1.04
SIX4-202ENST00000554079 C20orf202A1L168 122 aa8.57□□□□□ -1.04
SIX4-202ENST00000554079 OR4C45A6NMZ5 311 aa8.57□□□□□ -1.04
SIX4-202ENST00000554079 SLC38A8A6NNN8 435 aa8.57□□□□□ -1.04
SIX4-202ENST00000554079 ZNF736B4DX44 427 aaPredicted RBP8.57□□□□□ -1.04
SIX4-202ENST00000554079 MASP2O00187 686 aa8.57□□□□□ -1.04
SIX4-202ENST00000554079 ZFPL1O95159 310 aa8.57□□□□□ -1.04
SIX4-202ENST00000554079 UMODP07911 640 aa8.57□□□□□ -1.04
SIX4-202ENST00000554079 OR2T7P0C7T2 308 aa8.57□□□□□ -1.04
SIX4-202ENST00000554079 BCKDHBP21953 392 aa8.57□□□□□ -1.04
SIX4-202ENST00000554079 CHRNB4P30926 498 aa8.57□□□□□ -1.04
SIX4-202ENST00000554079 FRKP42685 505 aaPredicted RBP8.57□□□□□ -1.04
SIX4-202ENST00000554079 GABRA4P48169 554 aa8.57□□□□□ -1.04
SIX4-202ENST00000554079 PDLIM4P50479 330 aa8.57□□□□□ -1.04
SIX4-202ENST00000554079 MANFP55145 182 aaKnown RBP8.57□□□□□ -1.04
SIX4-202ENST00000554079 SLC35A1P78382 337 aa8.57□□□□□ -1.04
SIX4-202ENST00000554079 H3F3AP84243 136 aa8.57□□□□□ -1.04
SIX4-202ENST00000554079 PSG6Q00889 435 aa8.57□□□□□ -1.04
SIX4-202ENST00000554079 ZNF616Q08AN1 781 aa8.57□□□□□ -1.04
SIX4-202ENST00000554079 COL5A1-AS1Q5SY13 56 aa8.57□□□□□ -1.04
SIX4-202ENST00000554079 LHFPL4Q7Z7J7 247 aa8.57□□□□□ -1.04
SIX4-202ENST00000554079 C9orf40Q8IXQ3 194 aa8.57□□□□□ -1.04
SIX4-202ENST00000554079 SLC35F2Q8IXU6 374 aa8.57□□□□□ -1.04
SIX4-202ENST00000554079 CYB561A3Q8NBI2 242 aa8.57□□□□□ -1.04
SIX4-202ENST00000554079 AGBL5Q8NDL9 886 aa8.57□□□□□ -1.04
SIX4-202ENST00000554079 CHST13Q8NET6 341 aa8.57□□□□□ -1.04
SIX4-202ENST00000554079 OR51D1Q8NGF3 324 aa8.57□□□□□ -1.04
SIX4-202ENST00000554079 OR2T27Q8NH04 317 aa8.57□□□□□ -1.04
SIX4-202ENST00000554079 OR4X1Q8NH49 305 aa8.57□□□□□ -1.04
SIX4-202ENST00000554079 SKA2Q8WVK7 121 aaPredicted RBP8.57□□□□□ -1.04
SIX4-202ENST00000554079 SMARCD2Q92925 531 aa8.57□□□□□ -1.04
SIX4-202ENST00000554079 LMF1Q96S06 567 aa8.57□□□□□ -1.04
SIX4-202ENST00000554079 SPATC1LQ9H0A9 340 aa8.57□□□□□ -1.04
SIX4-202ENST00000554079 ELP3Q9H9T3 547 aa8.57□□□□□ -1.04
SIX4-202ENST00000554079 SLC17A5Q9NRA2 495 aa8.57□□□□□ -1.04
SIX4-202ENST00000554079 PLSCR2Q9NRY7 297 aa8.57□□□□□ -1.04
SIX4-202ENST00000554079 WSB2Q9NYS7 404 aaPredicted RBP8.57□□□□□ -1.04
SIX4-202ENST00000554079 KLK13Q9UKR3 277 aa8.57□□□□□ -1.04
SIX4-202ENST00000554079 PAPPA2Q9BXP8 1791 aa8.57□□□□□ -1.04
SIX4-202ENST00000554079 DOCK3Q8IZD9 2030 aa8.56□□□□□ -1.04
SIX4-202ENST00000554079 TRAV8-7A0A075B6U6 113 aa8.56□□□□□ -1.04
SIX4-202ENST00000554079 TRBV5-5A0A0J9YX44 114 aa8.56□□□□□ -1.04
SIX4-202ENST00000554079 A8MVM7 634 aa8.56□□□□□ -1.04
SIX4-202ENST00000554079 H0YL77 283 aa8.56□□□□□ -1.04
SIX4-202ENST00000554079 LEFTY2O00292 366 aa8.56□□□□□ -1.04
SIX4-202ENST00000554079 ETV2O00321 342 aaPredicted RBP8.56□□□□□ -1.04
SIX4-202ENST00000554079 TBX19O60806 448 aa8.56□□□□□ -1.04
SIX4-202ENST00000554079 PQBP1O60828 265 aaKnown RBP8.56□□□□□ -1.04
SIX4-202ENST00000554079 LEFTY1O75610 366 aa8.56□□□□□ -1.04
SIX4-202ENST00000554079 IGHEP01854 428 aa8.56□□□□□ -1.04
SIX4-202ENST00000554079 ERCC1P07992 297 aaPredicted RBP8.56□□□□□ -1.04
SIX4-202ENST00000554079 CTSHP09668 335 aa8.56□□□□□ -1.04
SIX4-202ENST00000554079 KLK2P20151 261 aa8.56□□□□□ -1.04
SIX4-202ENST00000554079 MAKP20794 623 aa8.56□□□□□ -1.04
SIX4-202ENST00000554079 TACR2P21452 398 aa8.56□□□□□ -1.04
SIX4-202ENST00000554079 BMI1P35226 326 aa8.56□□□□□ -1.04
SIX4-202ENST00000554079 ARRB1P49407 418 aaPredicted RBP8.56□□□□□ -1.04
SIX4-202ENST00000554079 LBX1P52954 281 aa8.56□□□□□ -1.04
SIX4-202ENST00000554079 IL15RAQ13261 267 aa8.56□□□□□ -1.04
SIX4-202ENST00000554079 RAB32Q13637 225 aa8.56□□□□□ -1.04
SIX4-202ENST00000554079 GGTLC2Q14390 218 aa8.56□□□□□ -1.04
SIX4-202ENST00000554079 ATP6V1FQ16864 119 aa8.56□□□□□ -1.04
SIX4-202ENST00000554079 RNF151Q2KHN1 245 aa8.56□□□□□ -1.04
SIX4-202ENST00000554079 OPN5Q6U736 354 aa8.56□□□□□ -1.04
SIX4-202ENST00000554079 SLCO4C1Q6ZQN7 724 aa8.56□□□□□ -1.04
SIX4-202ENST00000554079 FAM185AQ8N0U4 392 aa8.56□□□□□ -1.04
SIX4-202ENST00000554079 LYG1Q8N1E2 194 aa8.56□□□□□ -1.04
SIX4-202ENST00000554079 FBXO22Q8NEZ5 403 aa8.56□□□□□ -1.04
SIX4-202ENST00000554079 OR51A2Q8NGJ7 313 aa8.56□□□□□ -1.04
SIX4-202ENST00000554079 MFSD8Q8NHS3 518 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms