RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 C1QL3Q5VWW1 255 aa10.99□□□□□ -0.65
SHMT2-207ENST00000553837 LIPNQ5VXI9 398 aa10.99□□□□□ -0.65
SHMT2-207ENST00000553837 CHRDL2Q6WN34 429 aa10.99□□□□□ -0.65
SHMT2-207ENST00000553837 TMED4Q7Z7H5 227 aa10.99□□□□□ -0.65
SHMT2-207ENST00000553837 TMPRSS12Q86WS5 348 aa10.99□□□□□ -0.65
SHMT2-207ENST00000553837 ZNF440Q8IYI8 595 aa10.99□□□□□ -0.65
SHMT2-207ENST00000553837 ZNF561Q8N587 486 aa10.99□□□□□ -0.65
SHMT2-207ENST00000553837 OR8S1Q8NH09 359 aa10.99□□□□□ -0.65
SHMT2-207ENST00000553837 OR1L3Q8NH93 324 aa10.99□□□□□ -0.65
SHMT2-207ENST00000553837 AKR7LQ8NHP1 331 aa10.99□□□□□ -0.65
SHMT2-207ENST00000553837 FAM174AQ8TBP5 190 aa10.99□□□□□ -0.65
SHMT2-207ENST00000553837 TAAR8Q969N4 342 aa10.99□□□□□ -0.65
SHMT2-207ENST00000553837 POTEKPQ9BYX7 375 aa10.99□□□□□ -0.65
SHMT2-207ENST00000553837 FOXQ1Q9C009 403 aa10.99□□□□□ -0.65
SHMT2-207ENST00000553837 CHRDQ9H2X0 955 aa10.99□□□□□ -0.65
SHMT2-207ENST00000553837 TMPRSS5Q9H3S3 457 aa10.99□□□□□ -0.65
SHMT2-207ENST00000553837 SDK1Q7Z5N4 2213 aa10.98□□□□□ -0.65
SHMT2-207ENST00000553837 SPAG17Q6Q759 2223 aa10.98□□□□□ -0.65
SHMT2-207ENST00000553837 A0A1B0GTH9 108 aa10.98□□□□□ -0.65
SHMT2-207ENST00000553837 SULT2B1O00204 365 aa10.98□□□□□ -0.65
SHMT2-207ENST00000553837 SCDO00767 359 aa10.98□□□□□ -0.65
SHMT2-207ENST00000553837 GPANK1O95872 356 aa10.98□□□□□ -0.65
SHMT2-207ENST00000553837 ANXA2P07355 339 aaKnown RBP10.98□□□□□ -0.65
SHMT2-207ENST00000553837 CD14P08571 375 aa10.98□□□□□ -0.65
SHMT2-207ENST00000553837 TACR3P29371 465 aa10.98□□□□□ -0.65
SHMT2-207ENST00000553837 CSNK1EP49674 416 aaKnown RBP10.98□□□□□ -0.65
SHMT2-207ENST00000553837 ACTBP60709 375 aa10.98□□□□□ -0.65
SHMT2-207ENST00000553837 ACTG1P63261 375 aa10.98□□□□□ -0.65
SHMT2-207ENST00000553837 ZNF117Q03924 483 aa10.98□□□□□ -0.65
SHMT2-207ENST00000553837 ZP2Q05996 745 aa10.98□□□□□ -0.65
SHMT2-207ENST00000553837 RPL18Q07020 188 aaKnown RBP10.98□□□□□ -0.65
SHMT2-207ENST00000553837 PJVKQ0ZLH3 352 aa10.98□□□□□ -0.65
SHMT2-207ENST00000553837 ATXN7L3Q14CW9 347 aaPredicted RBP10.98□□□□□ -0.65
SHMT2-207ENST00000553837 C21orf62-AS1Q17RA5 79 aa10.98□□□□□ -0.65
SHMT2-207ENST00000553837 PLEKHN1Q494U1 663 aaPredicted RBP10.98□□□□□ -0.65
SHMT2-207ENST00000553837 LRRC37A5PQ49AS3 106 aa10.98□□□□□ -0.65
SHMT2-207ENST00000553837 ALG10Q5BKT4 473 aa10.98□□□□□ -0.65
SHMT2-207ENST00000553837 OTPQ5XKR4 325 aa10.98□□□□□ -0.65
SHMT2-207ENST00000553837 UNQ6126/PRO20091Q6UXV3 157 aa10.98□□□□□ -0.65
SHMT2-207ENST00000553837 C9orf40Q8IXQ3 194 aa10.98□□□□□ -0.65
SHMT2-207ENST00000553837 DMRTC2Q8IXT2 367 aaPredicted RBP10.98□□□□□ -0.65
SHMT2-207ENST00000553837 PRSS58Q8IYP2 241 aa10.98□□□□□ -0.65
SHMT2-207ENST00000553837 TDHQ8IZJ6 230 aa10.98□□□□□ -0.65
SHMT2-207ENST00000553837 CLEC1AQ8NC01 280 aa10.98□□□□□ -0.65
SHMT2-207ENST00000553837 OR5AP2Q8NGF4 316 aa10.98□□□□□ -0.65
SHMT2-207ENST00000553837 PPP1R1CQ8WVI7 109 aa10.98□□□□□ -0.65
SHMT2-207ENST00000553837 LIPHQ8WWY8 451 aa10.98□□□□□ -0.65
SHMT2-207ENST00000553837 SLC46A1Q96NT5 459 aa10.98□□□□□ -0.65
SHMT2-207ENST00000553837 TSPAN32Q96QS1 320 aa10.98□□□□□ -0.65
SHMT2-207ENST00000553837 GAL3ST4Q96RP7 486 aa10.98□□□□□ -0.65
SHMT2-207ENST00000553837 WNT5BQ9H1J7 359 aa10.98□□□□□ -0.65
SHMT2-207ENST00000553837 STEAP1Q9UHE8 339 aa10.98□□□□□ -0.65
SHMT2-207ENST00000553837 FER1L5A0AVI2 2057 aa10.98□□□□□ -0.65
SHMT2-207ENST00000553837 TRAV18A0A075B6X5 111 aa10.97□□□□□ -0.65
SHMT2-207ENST00000553837 TMEM72A0PK05 275 aa10.97□□□□□ -0.65
SHMT2-207ENST00000553837 TVP23AA6NH52 213 aa10.97□□□□□ -0.65
SHMT2-207ENST00000553837 ZNF705EA8MWA4 302 aaPredicted RBP10.97□□□□□ -0.65
SHMT2-207ENST00000553837 IFNA10P01566 189 aa10.97□□□□□ -0.65
SHMT2-207ENST00000553837 HEXBP07686 556 aa10.97□□□□□ -0.65
SHMT2-207ENST00000553837 PNMTP11086 282 aa10.97□□□□□ -0.65
SHMT2-207ENST00000553837 FOLR1P15328 257 aa10.97□□□□□ -0.65
SHMT2-207ENST00000553837 ADRA2CP18825 462 aa10.97□□□□□ -0.65
SHMT2-207ENST00000553837 RPS27P42677 84 aaKnown RBP10.97□□□□□ -0.65
SHMT2-207ENST00000553837 GRK6P43250 576 aa10.97□□□□□ -0.65
SHMT2-207ENST00000553837 NXPH1P58417 271 aa10.97□□□□□ -0.65
SHMT2-207ENST00000553837 TAS2R19P59542 299 aa10.97□□□□□ -0.65
SHMT2-207ENST00000553837 GUCA2AQ02747 115 aa10.97□□□□□ -0.65
SHMT2-207ENST00000553837 TDGQ13569 410 aa10.97□□□□□ -0.65
SHMT2-207ENST00000553837 MESTQ5EB52 335 aa10.97□□□□□ -0.65
SHMT2-207ENST00000553837 C9orf152Q5JTZ5 239 aa10.97□□□□□ -0.65
SHMT2-207ENST00000553837 TMEM205Q6UW68 189 aa10.97□□□□□ -0.65
SHMT2-207ENST00000553837 MARCH3Q86UD3 253 aa10.97□□□□□ -0.65
SHMT2-207ENST00000553837 LRRTM1Q86UE6 522 aa10.97□□□□□ -0.65
SHMT2-207ENST00000553837 GABRG1Q8N1C3 465 aa10.97□□□□□ -0.65
SHMT2-207ENST00000553837 DVL3Q92997 716 aaPredicted RBP10.97□□□□□ -0.65
SHMT2-207ENST00000553837 PIK3IP1Q96FE7 263 aa10.97□□□□□ -0.65
SHMT2-207ENST00000553837 C14orf144Q96I85 54 aa10.97□□□□□ -0.65
SHMT2-207ENST00000553837 OCSTAMPQ9BR26 566 aa10.97□□□□□ -0.65
SHMT2-207ENST00000553837 CHRNA10Q9GZZ6 450 aa10.97□□□□□ -0.65
SHMT2-207ENST00000553837 TSPAN10Q9H1Z9 355 aaPredicted RBP10.97□□□□□ -0.65
SHMT2-207ENST00000553837 FKRPQ9H9S5 495 aa10.97□□□□□ -0.65
SHMT2-207ENST00000553837 SRA1Q9HD15 236 aaKnown RBP10.97□□□□□ -0.65
SHMT2-207ENST00000553837 RCC2Q9P258 522 aaKnown RBP10.97□□□□□ -0.65
SHMT2-207ENST00000553837 RP1P56715 2156 aa10.97□□□□□ -0.65
SHMT2-207ENST00000553837 FRG2CA6NGY1 282 aa10.97□□□□□ -0.65
SHMT2-207ENST00000553837 CTAG2O75638 210 aa10.97□□□□□ -0.65
SHMT2-207ENST00000553837 RPP14O95059 124 aaKnown RBP10.97□□□□□ -0.65
SHMT2-207ENST00000553837 RAB3DO95716 219 aa10.97□□□□□ -0.65
SHMT2-207ENST00000553837 TACSTD2P09758 323 aa10.97□□□□□ -0.65
SHMT2-207ENST00000553837 OR8G3PP0DMU2 310 aa10.97□□□□□ -0.65
SHMT2-207ENST00000553837 COX5BP10606 129 aa10.97□□□□□ -0.65
SHMT2-207ENST00000553837 HLA-GP17693 338 aa10.97□□□□□ -0.65
SHMT2-207ENST00000553837 PRKXP51817 358 aa10.97□□□□□ -0.65
SHMT2-207ENST00000553837 ATP1B3P54709 279 aa10.97□□□□□ -0.65
SHMT2-207ENST00000553837 RAB2AP61019 212 aa10.97□□□□□ -0.65
SHMT2-207ENST00000553837 NAAAQ02083 359 aa10.97□□□□□ -0.65
SHMT2-207ENST00000553837 YOD1Q5VVQ6 348 aaPredicted RBP10.97□□□□□ -0.65
SHMT2-207ENST00000553837 POMZP3Q6PJE2 187 aa10.97□□□□□ -0.65
SHMT2-207ENST00000553837 TMEM200AQ86VY9 491 aa10.97□□□□□ -0.65
SHMT2-207ENST00000553837 BAP18Q8IXM2 172 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms