RNA–Protein interactions for RNA: ENST00000553779.5

ACTN1-210, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 530 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-210ENST00000553779 POM121CA8CG34 1229 aa8.31□□□□□ -1.08
ACTN1-210ENST00000553779 F5H0A9 414 aaPredicted RBP8.31□□□□□ -1.08
ACTN1-210ENST00000553779 F5H5P2 479 aa8.31□□□□□ -1.08
ACTN1-210ENST00000553779 J3QW42 95 aa8.31□□□□□ -1.08
ACTN1-210ENST00000553779 CXCR6O00574 342 aa8.31□□□□□ -1.08
ACTN1-210ENST00000553779 RENP00797 406 aa8.31□□□□□ -1.08
ACTN1-210ENST00000553779 SERPINA1P01009 418 aa8.31□□□□□ -1.08
ACTN1-210ENST00000553779 KNG1P01042 644 aa8.31□□□□□ -1.08
ACTN1-210ENST00000553779 HLA-DQA2P01906 255 aa8.31□□□□□ -1.08
ACTN1-210ENST00000553779 SELEP16581 610 aa8.31□□□□□ -1.08
ACTN1-210ENST00000553779 OMGP23515 440 aa8.31□□□□□ -1.08
ACTN1-210ENST00000553779 FPR3P25089 353 aa8.31□□□□□ -1.08
ACTN1-210ENST00000553779 SDHAP31040 664 aa8.31□□□□□ -1.08
ACTN1-210ENST00000553779 RBMXP38159 391 aaKnown RBP8.31□□□□□ -1.08
ACTN1-210ENST00000553779 ERFP50548 548 aa8.31□□□□□ -1.08
ACTN1-210ENST00000553779 RPS6KA3P51812 740 aa8.31□□□□□ -1.08
ACTN1-210ENST00000553779 LSM6P62312 80 aaKnown RBP8.31□□□□□ -1.08
ACTN1-210ENST00000553779 DEFA6Q01524 100 aa8.31□□□□□ -1.08
ACTN1-210ENST00000553779 BNIP1Q12981 228 aa8.31□□□□□ -1.08
ACTN1-210ENST00000553779 DYNC1I2Q13409 638 aaKnown RBP8.31□□□□□ -1.08
ACTN1-210ENST00000553779 KRT72Q14CN4 511 aa8.31□□□□□ -1.08
ACTN1-210ENST00000553779 SLC9A3R2Q15599 337 aa8.31□□□□□ -1.08
ACTN1-210ENST00000553779 GPR139Q6DWJ6 353 aa8.31□□□□□ -1.08
ACTN1-210ENST00000553779 PGM2L1Q6PCE3 622 aa8.31□□□□□ -1.08
ACTN1-210ENST00000553779 BOLLQ8N9W6 283 aaKnown RBP8.31□□□□□ -1.08
ACTN1-210ENST00000553779 GJC3Q8NFK1 279 aa8.31□□□□□ -1.08
ACTN1-210ENST00000553779 OR8G5Q8NG78 346 aa8.31□□□□□ -1.08
ACTN1-210ENST00000553779 FANK1Q8TC84 345 aa8.31□□□□□ -1.08
ACTN1-210ENST00000553779 SPRYD4Q8WW59 207 aaPredicted RBP8.31□□□□□ -1.08
ACTN1-210ENST00000553779 RAB40AQ8WXH6 277 aa8.31□□□□□ -1.08
ACTN1-210ENST00000553779 NUDT16L1Q9BRJ7 211 aaKnown RBP8.31□□□□□ -1.08
ACTN1-210ENST00000553779 PCGF1Q9BSM1 259 aa8.31□□□□□ -1.08
ACTN1-210ENST00000553779 CDADC1Q9BWV3 514 aa8.31□□□□□ -1.08
ACTN1-210ENST00000553779 HDHD2Q9H0R4 259 aa8.31□□□□□ -1.08
ACTN1-210ENST00000553779 VCXQ9H320 206 aa8.31□□□□□ -1.08
ACTN1-210ENST00000553779 TMEM100Q9NV29 134 aa8.31□□□□□ -1.08
ACTN1-210ENST00000553779 FGFR1OP2Q9NVK5 253 aa8.31□□□□□ -1.08
ACTN1-210ENST00000553779 ETAA1Q9NY74 926 aa8.31□□□□□ -1.08
ACTN1-210ENST00000553779 ATPIF1Q9UII2 106 aa8.31□□□□□ -1.08
ACTN1-210ENST00000553779 RPS6KA6Q9UK32 745 aa8.31□□□□□ -1.08
ACTN1-210ENST00000553779 COA3Q9Y2R0 106 aaPredicted RBP8.31□□□□□ -1.08
ACTN1-210ENST00000553779 ARL2BPQ9Y2Y0 163 aa8.31□□□□□ -1.08
ACTN1-210ENST00000553779 POLR3KQ9Y2Y1 108 aaPredicted RBP8.31□□□□□ -1.08
ACTN1-210ENST00000553779 TET2Q6N021 2002 aaPredicted RBP8.3□□□□□ -1.08
ACTN1-210ENST00000553779 A0A087WUU8 490 aa8.3□□□□□ -1.08
ACTN1-210ENST00000553779 MDFIC2A0A1B0GVS7 189 aa8.3□□□□□ -1.08
ACTN1-210ENST00000553779 UNC119BA6NIH7 251 aa8.3□□□□□ -1.08
ACTN1-210ENST00000553779 CLDN34H7C241 214 aa8.3□□□□□ -1.08
ACTN1-210ENST00000553779 RER1O15258 196 aa8.3□□□□□ -1.08
ACTN1-210ENST00000553779 HOXA3O43365 443 aaPredicted RBP8.3□□□□□ -1.08
ACTN1-210ENST00000553779 ENSAO43768 121 aaKnown RBP8.3□□□□□ -1.08
ACTN1-210ENST00000553779 SNX3O60493 162 aa8.3□□□□□ -1.08
ACTN1-210ENST00000553779 SCG5P05408 212 aa8.3□□□□□ -1.08
ACTN1-210ENST00000553779 H1F0P07305 194 aaKnown RBP8.3□□□□□ -1.08
ACTN1-210ENST00000553779 DBHP09172 617 aa8.3□□□□□ -1.08
ACTN1-210ENST00000553779 MDKP21741 143 aaPredicted RBP8.3□□□□□ -1.08
ACTN1-210ENST00000553779 CPT2P23786 658 aa8.3□□□□□ -1.08
ACTN1-210ENST00000553779 CRABP1P29762 137 aa8.3□□□□□ -1.08
ACTN1-210ENST00000553779 CD80P33681 288 aa8.3□□□□□ -1.08
ACTN1-210ENST00000553779 LIPEQ05469 1076 aa8.3□□□□□ -1.08
ACTN1-210ENST00000553779 KCNJ8Q15842 424 aa8.3□□□□□ -1.08
ACTN1-210ENST00000553779 BRICD5Q6PL45 260 aa8.3□□□□□ -1.08
ACTN1-210ENST00000553779 TBPL2Q6SJ96 375 aa8.3□□□□□ -1.08
ACTN1-210ENST00000553779 BRD3OSQ6XYD6 125 aa8.3□□□□□ -1.08
ACTN1-210ENST00000553779 MRPL21Q7Z2W9 205 aaKnown RBP8.3□□□□□ -1.08
ACTN1-210ENST00000553779 POU5F2Q8N7G0 328 aa8.3□□□□□ -1.08
ACTN1-210ENST00000553779 LRRC75AQ8NAA5 344 aa8.3□□□□□ -1.08
ACTN1-210ENST00000553779 OR2AJ1Q8NGZ0 328 aa8.3□□□□□ -1.08
ACTN1-210ENST00000553779 OR4F5Q8NH21 305 aa8.3□□□□□ -1.08
ACTN1-210ENST00000553779 UBE2FQ969M7 185 aa8.3□□□□□ -1.08
ACTN1-210ENST00000553779 TMIGD2Q96BF3 282 aa8.3□□□□□ -1.08
ACTN1-210ENST00000553779 ZNF48Q96MX3 618 aaPredicted RBP8.3□□□□□ -1.08
ACTN1-210ENST00000553779 SIGLEC11Q96RL6 698 aa8.3□□□□□ -1.08
ACTN1-210ENST00000553779 PITX2Q99697 317 aa8.3□□□□□ -1.08
ACTN1-210ENST00000553779 KCTD14Q9BQ13 255 aaPredicted RBP8.3□□□□□ -1.08
ACTN1-210ENST00000553779 SLC30A2Q9BRI3 323 aa8.3□□□□□ -1.08
ACTN1-210ENST00000553779 TMEM246Q9BRR3 403 aa8.3□□□□□ -1.08
ACTN1-210ENST00000553779 WDR76Q9H967 626 aa8.3□□□□□ -1.08
ACTN1-210ENST00000553779 MARCH7Q9H992 704 aa8.3□□□□□ -1.08
ACTN1-210ENST00000553779 NMNAT1Q9HAN9 279 aaPredicted RBP8.3□□□□□ -1.08
ACTN1-210ENST00000553779 BEX1Q9HBH7 125 aa8.3□□□□□ -1.08
ACTN1-210ENST00000553779 SAR1AQ9NR31 198 aa8.3□□□□□ -1.08
ACTN1-210ENST00000553779 NOP16Q9Y3C1 178 aaKnown RBP8.3□□□□□ -1.08
ACTN1-210ENST00000553779 IER3IP1Q9Y5U9 82 aa8.3□□□□□ -1.08
ACTN1-210ENST00000553779 SNX13Q9Y5W8 968 aa8.3□□□□□ -1.08
ACTN1-210ENST00000553779 F5H5K5 113 aa8.29□□□□□ -1.08
ACTN1-210ENST00000553779 H0YL77 283 aa8.29□□□□□ -1.08
ACTN1-210ENST00000553779 CDC42EP2O14613 210 aa8.29□□□□□ -1.08
ACTN1-210ENST00000553779 PHYHO14832 338 aa8.29□□□□□ -1.08
ACTN1-210ENST00000553779 LCATP04180 440 aa8.29□□□□□ -1.08
ACTN1-210ENST00000553779 WNT2P09544 360 aa8.29□□□□□ -1.08
ACTN1-210ENST00000553779 PPIAL4GP0DN37 164 aa8.29□□□□□ -1.08
ACTN1-210ENST00000553779 NOS3P29474 1203 aa8.29□□□□□ -1.08
ACTN1-210ENST00000553779 SLC7A2P52569 658 aa8.29□□□□□ -1.08
ACTN1-210ENST00000553779 RAG2P55895 527 aa8.29□□□□□ -1.08
ACTN1-210ENST00000553779 FGF12P61328 243 aa8.29□□□□□ -1.08
ACTN1-210ENST00000553779 PAX8Q06710 450 aa8.29□□□□□ -1.08
ACTN1-210ENST00000553779 OR8G1Q15617 311 aa8.29□□□□□ -1.08
ACTN1-210ENST00000553779 OR8B8Q15620 311 aa8.29□□□□□ -1.08
ACTN1-210ENST00000553779 MEP1BQ16820 701 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms