RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 TFPTP0C1Z6 253 aa1.67□□□□□ -2.14
VRK1-202ENST00000553683 OR4E1P0C645 316 aa1.67□□□□□ -2.14
VRK1-202ENST00000553683 ZNF14P17017 642 aaPredicted RBP1.67□□□□□ -2.14
VRK1-202ENST00000553683 SRMP19623 302 aa1.67□□□□□ -2.14
VRK1-202ENST00000553683 SYT1P21579 422 aa1.67□□□□□ -2.14
VRK1-202ENST00000553683 HMOX2P30519 316 aa1.67□□□□□ -2.14
VRK1-202ENST00000553683 GRIA1P42261 906 aa1.67□□□□□ -2.14
VRK1-202ENST00000553683 NPBWR2P48146 333 aa1.67□□□□□ -2.14
VRK1-202ENST00000553683 SERPINB9P50453 376 aa1.67□□□□□ -2.14
VRK1-202ENST00000553683 EMP2P54851 167 aa1.67□□□□□ -2.14
VRK1-202ENST00000553683 CDH4P55283 916 aa1.67□□□□□ -2.14
VRK1-202ENST00000553683 ACTBP60709 375 aa1.67□□□□□ -2.14
VRK1-202ENST00000553683 ACTG1P63261 375 aa1.67□□□□□ -2.14
VRK1-202ENST00000553683 ACTG2P63267 376 aa1.67□□□□□ -2.14
VRK1-202ENST00000553683 ACVR1Q04771 509 aa1.67□□□□□ -2.14
VRK1-202ENST00000553683 ZNF33AQ06730 810 aa1.67□□□□□ -2.14
VRK1-202ENST00000553683 CYP24A1Q07973 514 aa1.67□□□□□ -2.14
VRK1-202ENST00000553683 TGM3Q08188 693 aa1.67□□□□□ -2.14
VRK1-202ENST00000553683 DGUOKQ16854 277 aa1.67□□□□□ -2.14
VRK1-202ENST00000553683 COX19Q49B96 90 aa1.67□□□□□ -2.14
VRK1-202ENST00000553683 ARMC12Q5T9G4 340 aa1.67□□□□□ -2.14
VRK1-202ENST00000553683 LCN12Q6JVE5 192 aa1.67□□□□□ -2.14
VRK1-202ENST00000553683 ZNF880Q6PDB4 577 aa1.67□□□□□ -2.14
VRK1-202ENST00000553683 SHISA6Q6ZSJ9 500 aa1.67□□□□□ -2.14
VRK1-202ENST00000553683 TAC4Q86UU9 113 aa1.67□□□□□ -2.14
VRK1-202ENST00000553683 FAM228AQ86W67 206 aa1.67□□□□□ -2.14
VRK1-202ENST00000553683 NUDCD3Q8IVD9 361 aa1.67□□□□□ -2.14
VRK1-202ENST00000553683 IQCKQ8N0W5 287 aa1.67□□□□□ -2.14
VRK1-202ENST00000553683 TBC1D19Q8N5T2 526 aa1.67□□□□□ -2.14
VRK1-202ENST00000553683 SNX31Q8N9S9 440 aa1.67□□□□□ -2.14
VRK1-202ENST00000553683 OR52H1Q8NGJ2 320 aa1.67□□□□□ -2.14
VRK1-202ENST00000553683 OR5M1Q8NGP8 315 aa1.67□□□□□ -2.14
VRK1-202ENST00000553683 OR52N1Q8NH53 320 aa1.67□□□□□ -2.14
VRK1-202ENST00000553683 OR5W2Q8NH69 310 aa1.67□□□□□ -2.14
VRK1-202ENST00000553683 NDNFQ8TB73 568 aa1.67□□□□□ -2.14
VRK1-202ENST00000553683 TCP10LQ8TDR4 215 aa1.67□□□□□ -2.14
VRK1-202ENST00000553683 DTD1Q8TEA8 209 aa1.67□□□□□ -2.14
VRK1-202ENST00000553683 DYDC1Q8WWB3 177 aa1.67□□□□□ -2.14
VRK1-202ENST00000553683 CACNG8Q8WXS5 425 aa1.67□□□□□ -2.14
VRK1-202ENST00000553683 RGP1Q92546 391 aaPredicted RBP1.67□□□□□ -2.14
VRK1-202ENST00000553683 NTAN1Q96AB6 310 aa1.67□□□□□ -2.14
VRK1-202ENST00000553683 KIAA1143Q96AT1 154 aaPredicted RBP1.67□□□□□ -2.14
VRK1-202ENST00000553683 DNAJC19Q96DA6 116 aa1.67□□□□□ -2.14
VRK1-202ENST00000553683 OTUB2Q96DC9 234 aa1.67□□□□□ -2.14
VRK1-202ENST00000553683 CXorf40BQ96DE9 158 aa1.67□□□□□ -2.14
VRK1-202ENST00000553683 RMND5BQ96G75 393 aaPredicted RBP1.67□□□□□ -2.14
VRK1-202ENST00000553683 ZNF514Q96K75 400 aaPredicted RBP1.67□□□□□ -2.14
VRK1-202ENST00000553683 WFIKKN1Q96NZ8 548 aa1.67□□□□□ -2.14
VRK1-202ENST00000553683 KCTD14Q9BQ13 255 aaPredicted RBP1.67□□□□□ -2.14
VRK1-202ENST00000553683 GON7Q9BXV9 100 aa1.67□□□□□ -2.14
VRK1-202ENST00000553683 NDEL1Q9GZM8 345 aa1.67□□□□□ -2.14
VRK1-202ENST00000553683 C6orf62Q9GZU0 229 aaPredicted RBP1.67□□□□□ -2.14
VRK1-202ENST00000553683 RACGAP1Q9H0H5 632 aa1.67□□□□□ -2.14
VRK1-202ENST00000553683 BLZF1Q9H2G9 400 aa1.67□□□□□ -2.14
VRK1-202ENST00000553683 OR51B6Q9H340 312 aa1.67□□□□□ -2.14
VRK1-202ENST00000553683 CENPHQ9H3R5 247 aa1.67□□□□□ -2.14
VRK1-202ENST00000553683 TRIM45Q9H8W5 580 aaPredicted RBP1.67□□□□□ -2.14
VRK1-202ENST00000553683 PALMDQ9NP74 551 aa1.67□□□□□ -2.14
VRK1-202ENST00000553683 NT5MQ9NPB1 228 aa1.67□□□□□ -2.14
VRK1-202ENST00000553683 TREX1Q9NSU2 369 aa1.67□□□□□ -2.14
VRK1-202ENST00000553683 ARMC1Q9NVT9 282 aa1.67□□□□□ -2.14
VRK1-202ENST00000553683 SMOXQ9NWM0 555 aa1.67□□□□□ -2.14
VRK1-202ENST00000553683 BFARQ9NZS9 450 aa1.67□□□□□ -2.14
VRK1-202ENST00000553683 ZNRD1Q9P1U0 126 aa1.67□□□□□ -2.14
VRK1-202ENST00000553683 CYB5R1Q9UHQ9 305 aa1.67□□□□□ -2.14
VRK1-202ENST00000553683 ENPP5Q9UJA9 477 aa1.67□□□□□ -2.14
VRK1-202ENST00000553683 MRPS7Q9Y2R9 242 aaKnown RBP1.67□□□□□ -2.14
VRK1-202ENST00000553683 HEY1Q9Y5J3 304 aa1.67□□□□□ -2.14
VRK1-202ENST00000553683 CDK12Q9NYV4 1490 aaPredicted RBP1.67□□□□□ -2.14
VRK1-202ENST00000553683 RIMS1Q86UR5 1692 aaKnown RBP1.67□□□□□ -2.14
VRK1-202ENST00000553683 KMT2BQ9UMN6 2715 aaPredicted RBP1.67□□□□□ -2.14
VRK1-202ENST00000553683 PPIP5K1Q6PFW1 1433 aa1.66□□□□□ -2.14
VRK1-202ENST00000553683 CLASP1Q7Z460 1538 aa1.66□□□□□ -2.14
VRK1-202ENST00000553683 MYO15BQ96JP2 1530 aa1.66□□□□□ -2.14
VRK1-202ENST00000553683 MADDQ8WXG6 1647 aa1.66□□□□□ -2.14
VRK1-202ENST00000553683 A0A1B0GVX0 72 aa1.66□□□□□ -2.14
VRK1-202ENST00000553683 BTBD17A6NE02 478 aa1.66□□□□□ -2.14
VRK1-202ENST00000553683 EFCAB10A6NFE3 127 aa1.66□□□□□ -2.14
VRK1-202ENST00000553683 CENPBD1B2RD01 187 aa1.66□□□□□ -2.14
VRK1-202ENST00000553683 ZNF701M0R085 212 aaPredicted RBP1.66□□□□□ -2.14
VRK1-202ENST00000553683 PRRG1O14668 218 aa1.66□□□□□ -2.14
VRK1-202ENST00000553683 AIM2O14862 343 aa1.66□□□□□ -2.14
VRK1-202ENST00000553683 COCHO43405 550 aa1.66□□□□□ -2.14
VRK1-202ENST00000553683 CRYZL1O95825 349 aa1.66□□□□□ -2.14
VRK1-202ENST00000553683 AGTP01019 485 aa1.66□□□□□ -2.14
VRK1-202ENST00000553683 APOA1P02647 267 aa1.66□□□□□ -2.14
VRK1-202ENST00000553683 CTXN2P0C2S0 81 aa1.66□□□□□ -2.14
VRK1-202ENST00000553683 IGHV1-8P0DP01 117 aa1.66□□□□□ -2.14
VRK1-202ENST00000553683 CCL2P13500 99 aa1.66□□□□□ -2.14
VRK1-202ENST00000553683 NCF2P19878 526 aaPredicted RBP1.66□□□□□ -2.14
VRK1-202ENST00000553683 EIF2S2P20042 333 aaKnown RBP1.66□□□□□ -2.14
VRK1-202ENST00000553683 RAB4AP20338 218 aa1.66□□□□□ -2.14
VRK1-202ENST00000553683 ATP6V1C1P21283 382 aa1.66□□□□□ -2.14
VRK1-202ENST00000553683 CNR1P21554 472 aa1.66□□□□□ -2.14
VRK1-202ENST00000553683 NPY1RP25929 384 aa1.66□□□□□ -2.14
VRK1-202ENST00000553683 PSMB6P28072 239 aa1.66□□□□□ -2.14
VRK1-202ENST00000553683 IFNA8P32881 189 aa1.66□□□□□ -2.14
VRK1-202ENST00000553683 FDFT1P37268 417 aa1.66□□□□□ -2.14
VRK1-202ENST00000553683 CRATP43155 626 aa1.66□□□□□ -2.14
VRK1-202ENST00000553683 NAMPTP43490 491 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms