RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 ERVS71-1P61550 626 aa11.91□□□□□ -0.5
TUBB3-202ENST00000553656 ADARB1P78563 741 aaKnown RBP11.91□□□□□ -0.5
TUBB3-202ENST00000553656 MALLQ13021 153 aa11.91□□□□□ -0.5
TUBB3-202ENST00000553656 MOGQ16653 247 aa11.91□□□□□ -0.5
TUBB3-202ENST00000553656 KRTAP27-1Q3LI81 207 aa11.91□□□□□ -0.5
TUBB3-202ENST00000553656 SPATA46Q5T0L3 261 aa11.91□□□□□ -0.5
TUBB3-202ENST00000553656 C8orf59Q8N0T1 100 aaPredicted RBP11.91□□□□□ -0.5
TUBB3-202ENST00000553656 OR10H4Q8NGA5 316 aa11.91□□□□□ -0.5
TUBB3-202ENST00000553656 RHOXF1Q8NHV9 184 aa11.91□□□□□ -0.5
TUBB3-202ENST00000553656 SLC25A40Q8TBP6 338 aa11.91□□□□□ -0.5
TUBB3-202ENST00000553656 RNFT2Q96EX2 444 aa11.91□□□□□ -0.5
TUBB3-202ENST00000553656 CACNG6Q9BXT2 260 aa11.91□□□□□ -0.5
TUBB3-202ENST00000553656 MROQ9BYG7 248 aa11.91□□□□□ -0.5
TUBB3-202ENST00000553656 MRPL37Q9BZE1 423 aaKnown RBP11.91□□□□□ -0.5
TUBB3-202ENST00000553656 OR2J1Q9GZK6 312 aa11.91□□□□□ -0.5
TUBB3-202ENST00000553656 SP140LQ9H930 580 aa11.91□□□□□ -0.5
TUBB3-202ENST00000553656 SLCO1C1Q9NYB5 712 aa11.91□□□□□ -0.5
TUBB3-202ENST00000553656 IKZF2Q9UKS7 526 aa11.91□□□□□ -0.5
TUBB3-202ENST00000553656 KLHDC2Q9Y2U9 406 aa11.91□□□□□ -0.5
TUBB3-202ENST00000553656 DSCAMO60469 2012 aa11.91□□□□□ -0.5
TUBB3-202ENST00000553656 M0R233 179 aa11.9□□□□□ -0.5
TUBB3-202ENST00000553656 APOL3O95236 402 aa11.9□□□□□ -0.5
TUBB3-202ENST00000553656 CLIC3O95833 236 aa11.9□□□□□ -0.5
TUBB3-202ENST00000553656 NGFP01138 241 aa11.9□□□□□ -0.5
TUBB3-202ENST00000553656 MT-ND5P03915 603 aa11.9□□□□□ -0.5
TUBB3-202ENST00000553656 ANXA2P07355 339 aaKnown RBP11.9□□□□□ -0.5
TUBB3-202ENST00000553656 ERCC1P07992 297 aaPredicted RBP11.9□□□□□ -0.5
TUBB3-202ENST00000553656 OR2T7P0C7T2 308 aa11.9□□□□□ -0.5
TUBB3-202ENST00000553656 ZNF250P15622 560 aa11.9□□□□□ -0.5
TUBB3-202ENST00000553656 GABRB1P18505 474 aa11.9□□□□□ -0.5
TUBB3-202ENST00000553656 OPRL1P41146 370 aa11.9□□□□□ -0.5
TUBB3-202ENST00000553656 CX3CR1P49238 355 aa11.9□□□□□ -0.5
TUBB3-202ENST00000553656 EVX1P49640 407 aa11.9□□□□□ -0.5
TUBB3-202ENST00000553656 HCCSP53701 268 aa11.9□□□□□ -0.5
TUBB3-202ENST00000553656 AQP4P55087 323 aa11.9□□□□□ -0.5
TUBB3-202ENST00000553656 ACTC1P68032 377 aa11.9□□□□□ -0.5
TUBB3-202ENST00000553656 ACTA1P68133 377 aa11.9□□□□□ -0.5
TUBB3-202ENST00000553656 MAD2L1BPQ15013 274 aaPredicted RBP11.9□□□□□ -0.5
TUBB3-202ENST00000553656 NKPD1Q17RQ9 610 aa11.9□□□□□ -0.5
TUBB3-202ENST00000553656 C11orf71Q6IPW1 123 aa11.9□□□□□ -0.5
TUBB3-202ENST00000553656 OR2T27Q8NH04 317 aa11.9□□□□□ -0.5
TUBB3-202ENST00000553656 SNX33Q8WV41 574 aa11.9□□□□□ -0.5
TUBB3-202ENST00000553656 AMELYQ99218 206 aa11.9□□□□□ -0.5
TUBB3-202ENST00000553656 DOK1Q99704 481 aa11.9□□□□□ -0.5
TUBB3-202ENST00000553656 NIPAL2Q9H841 368 aa11.9□□□□□ -0.5
TUBB3-202ENST00000553656 PLCE1Q9P212 2302 aa11.9□□□□□ -0.5
TUBB3-202ENST00000553656 AASSQ9UDR5 926 aa11.9□□□□□ -0.5
TUBB3-202ENST00000553656 ITGB1BP2Q9UKP3 347 aa11.9□□□□□ -0.5
TUBB3-202ENST00000553656 RPL36Q9Y3U8 105 aaKnown RBP11.9□□□□□ -0.5
TUBB3-202ENST00000553656 PCDHGB1Q9Y5G3 927 aa11.9□□□□□ -0.5
TUBB3-202ENST00000553656 N6AMT1Q9Y5N5 214 aa11.9□□□□□ -0.5
TUBB3-202ENST00000553656 HSPE1-MOB4S4R3N1 261 aa11.9□□□□□ -0.5
TUBB3-202ENST00000553656 SETXQ7Z333 2677 aaKnown RBP11.9□□□□□ -0.5
TUBB3-202ENST00000553656 HRNRQ86YZ3 2850 aaPredicted RBP11.89□□□□□ -0.51
TUBB3-202ENST00000553656 CYSRT1A8MQ03 144 aa11.89□□□□□ -0.51
TUBB3-202ENST00000553656 ZNF254O75437 659 aa11.89□□□□□ -0.51
TUBB3-202ENST00000553656 CD8AP01732 235 aa11.89□□□□□ -0.51
TUBB3-202ENST00000553656 OTX1P32242 354 aaPredicted RBP11.89□□□□□ -0.51
TUBB3-202ENST00000553656 CDKN1AP38936 164 aa11.89□□□□□ -0.51
TUBB3-202ENST00000553656 HSPA13P48723 471 aa11.89□□□□□ -0.51
TUBB3-202ENST00000553656 CXCR4P61073 352 aa11.89□□□□□ -0.51
TUBB3-202ENST00000553656 ZNF91Q05481 1191 aa11.89□□□□□ -0.51
TUBB3-202ENST00000553656 EGR3Q06889 387 aa11.89□□□□□ -0.51
TUBB3-202ENST00000553656 SWI5Q1ZZU3 235 aa11.89□□□□□ -0.51
TUBB3-202ENST00000553656 MBNL2Q5VZF2 373 aaKnown RBP11.89□□□□□ -0.51
TUBB3-202ENST00000553656 DEGS2Q6QHC5 323 aa11.89□□□□□ -0.51
TUBB3-202ENST00000553656 ZNF322Q6U7Q0 402 aaPredicted RBP11.89□□□□□ -0.51
TUBB3-202ENST00000553656 LRRN1Q6UXK5 716 aa11.89□□□□□ -0.51
TUBB3-202ENST00000553656 IZUMO2Q6UXV1 221 aa11.89□□□□□ -0.51
TUBB3-202ENST00000553656 KLF14Q8TD94 323 aaPredicted RBP11.89□□□□□ -0.51
TUBB3-202ENST00000553656 IGFBPL1Q8WX77 278 aa11.89□□□□□ -0.51
TUBB3-202ENST00000553656 PERPQ96FX8 193 aa11.89□□□□□ -0.51
TUBB3-202ENST00000553656 MARS2Q96GW9 593 aaKnown RBP11.89□□□□□ -0.51
TUBB3-202ENST00000553656 TBX5Q99593 518 aa11.89□□□□□ -0.51
TUBB3-202ENST00000553656 VRK1Q99986 396 aaPredicted RBP11.89□□□□□ -0.51
TUBB3-202ENST00000553656 C1QTNF5Q9BXJ0 243 aa11.89□□□□□ -0.51
TUBB3-202ENST00000553656 TTTY10Q9BZA0 68 aa11.89□□□□□ -0.51
TUBB3-202ENST00000553656 PTTG3PQ9NZH4 202 aa11.89□□□□□ -0.51
TUBB3-202ENST00000553656 COPS3Q9UNS2 423 aa11.89□□□□□ -0.51
TUBB3-202ENST00000553656 STARD10Q9Y365 291 aa11.89□□□□□ -0.51
TUBB3-202ENST00000553656 AKAP6Q13023 2319 aa11.89□□□□□ -0.51
TUBB3-202ENST00000553656 APCP25054 2843 aa11.89□□□□□ -0.51
TUBB3-202ENST00000553656 NBPF19A0A087WUL8 3843 aa11.88□□□□□ -0.51
TUBB3-202ENST00000553656 ANKRD17O75179 2603 aaKnown RBP11.88□□□□□ -0.51
TUBB3-202ENST00000553656 PLSCR5A0PG75 271 aa11.88□□□□□ -0.51
TUBB3-202ENST00000553656 IRGMA1A4Y4 181 aa11.88□□□□□ -0.51
TUBB3-202ENST00000553656 H7C417 338 aa11.88□□□□□ -0.51
TUBB3-202ENST00000553656 OVOL3O00110 214 aa11.88□□□□□ -0.51
TUBB3-202ENST00000553656 PSMD9O00233 223 aa11.88□□□□□ -0.51
TUBB3-202ENST00000553656 TBX1O43435 398 aa11.88□□□□□ -0.51
TUBB3-202ENST00000553656 TIMM8AO60220 97 aaPredicted RBP11.88□□□□□ -0.51
TUBB3-202ENST00000553656 KRT8P05787 483 aa11.88□□□□□ -0.51
TUBB3-202ENST00000553656 DBTP11182 482 aaKnown RBP11.88□□□□□ -0.51
TUBB3-202ENST00000553656 VHLP40337 213 aa11.88□□□□□ -0.51
TUBB3-202ENST00000553656 PTH2RP49190 550 aa11.88□□□□□ -0.51
TUBB3-202ENST00000553656 PPOXP50336 477 aa11.88□□□□□ -0.51
TUBB3-202ENST00000553656 RIDAP52758 137 aaKnown RBP11.88□□□□□ -0.51
TUBB3-202ENST00000553656 ART1P52961 327 aa11.88□□□□□ -0.51
TUBB3-202ENST00000553656 ATP5J2P56134 94 aa11.88□□□□□ -0.51
TUBB3-202ENST00000553656 ZNF121P58317 390 aaPredicted RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms