RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 EGFEM1PQ0D2K5 195 aa11.26□□□□□ -0.61
PRPF39-204ENST00000553605 SCRN3Q0VDG4 424 aa11.26□□□□□ -0.61
PRPF39-204ENST00000553605 DCTN2Q13561 401 aaKnown RBP11.26□□□□□ -0.61
PRPF39-204ENST00000553605 ENTPD8Q5MY95 495 aa11.26□□□□□ -0.61
PRPF39-204ENST00000553605 INTS11Q5TA45 600 aaKnown RBP11.26□□□□□ -0.61
PRPF39-204ENST00000553605 PRAMEF6Q5VXH4 476 aa11.26□□□□□ -0.61
PRPF39-204ENST00000553605 CRIP3Q6Q6R5 217 aa11.26□□□□□ -0.61
PRPF39-204ENST00000553605 RNF144BQ7Z419 303 aa11.26□□□□□ -0.61
PRPF39-204ENST00000553605 CMTM4Q8IZR5 234 aa11.26□□□□□ -0.61
PRPF39-204ENST00000553605 PNKDQ8N490 385 aa11.26□□□□□ -0.61
PRPF39-204ENST00000553605 LY6G5BQ8NDX9 201 aa11.26□□□□□ -0.61
PRPF39-204ENST00000553605 SLC7A13Q8TCU3 470 aa11.26□□□□□ -0.61
PRPF39-204ENST00000553605 ST8SIA4Q92187 359 aa11.26□□□□□ -0.61
PRPF39-204ENST00000553605 ECSITQ9BQ95 431 aa11.26□□□□□ -0.61
PRPF39-204ENST00000553605 ALG12Q9BV10 488 aa11.26□□□□□ -0.61
PRPF39-204ENST00000553605 C20orf27Q9GZN8 174 aa11.26□□□□□ -0.61
PRPF39-204ENST00000553605 MEPEQ9NQ76 525 aaPredicted RBP11.26□□□□□ -0.61
PRPF39-204ENST00000553605 TRIM36Q9NQ86 728 aa11.26□□□□□ -0.61
PRPF39-204ENST00000553605 SERTAD4Q9NUC0 356 aa11.26□□□□□ -0.61
PRPF39-204ENST00000553605 SLC7A7Q9UM01 511 aa11.26□□□□□ -0.61
PRPF39-204ENST00000553605 OOEPA6NGQ2 149 aa11.25□□□□□ -0.61
PRPF39-204ENST00000553605 J3QW42 95 aa11.25□□□□□ -0.61
PRPF39-204ENST00000553605 SERPINB7O75635 380 aa11.25□□□□□ -0.61
PRPF39-204ENST00000553605 SCG5P05408 212 aa11.25□□□□□ -0.61
PRPF39-204ENST00000553605 HOXD3P31249 432 aaPredicted RBP11.25□□□□□ -0.61
PRPF39-204ENST00000553605 CD200P41217 278 aa11.25□□□□□ -0.61
PRPF39-204ENST00000553605 KLRD1Q13241 179 aa11.25□□□□□ -0.61
PRPF39-204ENST00000553605 GCNT6Q5T4J0 391 aa11.25□□□□□ -0.61
PRPF39-204ENST00000553605 ARMC8Q8IUR7 673 aa11.25□□□□□ -0.61
PRPF39-204ENST00000553605 MOSPD2Q8NHP6 518 aa11.25□□□□□ -0.61
PRPF39-204ENST00000553605 FNDC8Q8TC99 324 aa11.25□□□□□ -0.61
PRPF39-204ENST00000553605 ADAMTS16Q8TE57 1224 aa11.25□□□□□ -0.61
PRPF39-204ENST00000553605 UBLCP1Q8WVY7 318 aaPredicted RBP11.25□□□□□ -0.61
PRPF39-204ENST00000553605 MPP4Q96JB8 637 aa11.25□□□□□ -0.61
PRPF39-204ENST00000553605 NKX3-1Q99801 234 aaPredicted RBP11.25□□□□□ -0.61
PRPF39-204ENST00000553605 ZNF426Q9BUY5 554 aa11.25□□□□□ -0.61
PRPF39-204ENST00000553605 TXNIPQ9H3M7 391 aa11.25□□□□□ -0.61
PRPF39-204ENST00000553605 EMC7Q9NPA0 242 aa11.25□□□□□ -0.61
PRPF39-204ENST00000553605 POLE4Q9NR33 117 aa11.25□□□□□ -0.61
PRPF39-204ENST00000553605 C20orf141Q9NUB4 165 aa11.25□□□□□ -0.61
PRPF39-204ENST00000553605 LCE6AA0A183 80 aa11.24□□□□□ -0.61
PRPF39-204ENST00000553605 A0A1W2PRX2 142 aa11.24□□□□□ -0.61
PRPF39-204ENST00000553605 TLDC2A0PJX2 215 aa11.24□□□□□ -0.61
PRPF39-204ENST00000553605 NPIPB13A6NJU9 1138 aa11.24□□□□□ -0.61
PRPF39-204ENST00000553605 NPIPB4C9JG80 1138 aa11.24□□□□□ -0.61
PRPF39-204ENST00000553605 SERPINE1P05121 402 aa11.24□□□□□ -0.61
PRPF39-204ENST00000553605 PF4V1P10720 104 aa11.24□□□□□ -0.61
PRPF39-204ENST00000553605 BGNP21810 368 aa11.24□□□□□ -0.61
PRPF39-204ENST00000553605 AQP1P29972 269 aa11.24□□□□□ -0.61
PRPF39-204ENST00000553605 RGS6P49758 472 aa11.24□□□□□ -0.61
PRPF39-204ENST00000553605 UBE2E1P51965 193 aa11.24□□□□□ -0.61
PRPF39-204ENST00000553605 ACSM1Q08AH1 577 aa11.24□□□□□ -0.61
PRPF39-204ENST00000553605 HABP2Q14520 560 aaPredicted RBP11.24□□□□□ -0.61
PRPF39-204ENST00000553605 LAPTM4AQ15012 233 aa11.24□□□□□ -0.61
PRPF39-204ENST00000553605 NPTX1Q15818 432 aa11.24□□□□□ -0.61
PRPF39-204ENST00000553605 DMRTC1Q5HYR2 192 aa11.24□□□□□ -0.61
PRPF39-204ENST00000553605 MSANTD1Q6ZTZ1 278 aa11.24□□□□□ -0.61
PRPF39-204ENST00000553605 Q8N7P7 452 aa11.24□□□□□ -0.61
PRPF39-204ENST00000553605 SMYD1Q8NB12 490 aa11.24□□□□□ -0.61
PRPF39-204ENST00000553605 OR51G2Q8NGK0 314 aa11.24□□□□□ -0.61
PRPF39-204ENST00000553605 OR6T1Q8NGN1 323 aa11.24□□□□□ -0.61
PRPF39-204ENST00000553605 MUC7Q8TAX7 377 aa11.24□□□□□ -0.61
PRPF39-204ENST00000553605 WIPF2Q8TF74 440 aaPredicted RBP11.24□□□□□ -0.61
PRPF39-204ENST00000553605 RORBQ92753 470 aa11.24□□□□□ -0.61
PRPF39-204ENST00000553605 DMRTB1Q96MA1 342 aa11.24□□□□□ -0.61
PRPF39-204ENST00000553605 CPPED1Q9BRF8 314 aaPredicted RBP11.24□□□□□ -0.61
PRPF39-204ENST00000553605 PAIP1Q9H074 479 aaKnown RBP11.24□□□□□ -0.61
PRPF39-204ENST00000553605 TRAPPC13A5PLN9 417 aa11.23□□□□□ -0.61
PRPF39-204ENST00000553605 MEGF11A6BM72 1044 aa11.23□□□□□ -0.61
PRPF39-204ENST00000553605 SDHDO14521 159 aa11.23□□□□□ -0.61
PRPF39-204ENST00000553605 HDAC3O15379 428 aa11.23□□□□□ -0.61
PRPF39-204ENST00000553605 PEX14O75381 377 aa11.23□□□□□ -0.61
PRPF39-204ENST00000553605 OR7A10O76100 309 aa11.23□□□□□ -0.61
PRPF39-204ENST00000553605 PF4P02776 101 aa11.23□□□□□ -0.61
PRPF39-204ENST00000553605 DBHP09172 617 aa11.23□□□□□ -0.61
PRPF39-204ENST00000553605 TSPAN19P0C672 248 aa11.23□□□□□ -0.61
PRPF39-204ENST00000553605 POU4F2Q12837 409 aa11.23□□□□□ -0.61
PRPF39-204ENST00000553605 TOP3AQ13472 1001 aaPredicted RBP11.23□□□□□ -0.61
PRPF39-204ENST00000553605 SCARB2Q14108 478 aa11.23□□□□□ -0.61
PRPF39-204ENST00000553605 BEND6Q5SZJ8 279 aaPredicted RBP11.23□□□□□ -0.61
PRPF39-204ENST00000553605 C17orf53Q8N3J3 647 aaPredicted RBP11.23□□□□□ -0.61
PRPF39-204ENST00000553605 FGFRL1Q8N441 504 aa11.23□□□□□ -0.61
PRPF39-204ENST00000553605 MNS1Q8NEH6 495 aa11.23□□□□□ -0.61
PRPF39-204ENST00000553605 GTF2H4Q92759 462 aa11.23□□□□□ -0.61
PRPF39-204ENST00000553605 TNFRSF14Q92956 283 aa11.23□□□□□ -0.61
PRPF39-204ENST00000553605 APOBEC3DQ96AK3 386 aaPredicted RBP11.23□□□□□ -0.61
PRPF39-204ENST00000553605 PKNOX2Q96KN3 472 aa11.23□□□□□ -0.61
PRPF39-204ENST00000553605 DDOQ99489 341 aa11.23□□□□□ -0.61
PRPF39-204ENST00000553605 SORT1Q99523 831 aa11.23□□□□□ -0.61
PRPF39-204ENST00000553605 DCTN5Q9BTE1 182 aa11.23□□□□□ -0.61
PRPF39-204ENST00000553605 ZNF702PQ9H963 129 aa11.23□□□□□ -0.61
PRPF39-204ENST00000553605 WDR76Q9H967 626 aa11.23□□□□□ -0.61
PRPF39-204ENST00000553605 KAAG1Q9UBP8 84 aa11.23□□□□□ -0.61
PRPF39-204ENST00000553605 DNAH1Q9P2D7 4330 aa11.23□□□□□ -0.61
PRPF39-204ENST00000553605 CHST1O43916 411 aa11.22□□□□□ -0.61
PRPF39-204ENST00000553605 MT-ND1P03886 318 aa11.22□□□□□ -0.61
PRPF39-204ENST00000553605 SLC1A6P48664 564 aa11.22□□□□□ -0.61
PRPF39-204ENST00000553605 RPL27P61353 136 aaKnown RBP11.22□□□□□ -0.61
PRPF39-204ENST00000553605 DUSP7Q16829 419 aa11.22□□□□□ -0.61
PRPF39-204ENST00000553605 LRRC75BQ2VPJ9 315 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms