RNA–Protein interactions for RNA: ENST00000553570.5

ATXN3-222, Transcript of ataxin 3, human

TSL 1 (best)

Gene ATXN3, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-222	ENST00000553570	UPK3A	O75631	287 aa		4.07	□□□□□ -1.76
ATXN3-222	ENST00000553570	CTAG2	O75638	210 aa		4.07	□□□□□ -1.76
ATXN3-222	ENST00000553570	OR7A10	O76100	309 aa		4.07	□□□□□ -1.76
ATXN3-222	ENST00000553570	NDUFB4	O95168	129 aa		4.07	□□□□□ -1.76
ATXN3-222	ENST00000553570	OR5F1	O95221	314 aa		4.07	□□□□□ -1.76
ATXN3-222	ENST00000553570	GADD45G	O95257	159 aa		4.07	□□□□□ -1.76
ATXN3-222	ENST00000553570	BCL10	O95999	233 aa		4.07	□□□□□ -1.76
ATXN3-222	ENST00000553570	HPR	P00739	348 aa		4.07	□□□□□ -1.76
ATXN3-222	ENST00000553570	MT-ND1	P03886	318 aa		4.07	□□□□□ -1.76
ATXN3-222	ENST00000553570	H1F0	P07305	194 aa	Known RBP	4.07	□□□□□ -1.76
ATXN3-222	ENST00000553570	CD79A	P11912	226 aa		4.07	□□□□□ -1.76
ATXN3-222	ENST00000553570	HLA-DOB	P13765	273 aa		4.07	□□□□□ -1.76
ATXN3-222	ENST00000553570	ITGA2	P17301	1181 aa		4.07	□□□□□ -1.76
ATXN3-222	ENST00000553570	DNASE1	P24855	282 aa		4.07	□□□□□ -1.76
ATXN3-222	ENST00000553570	GCH1	P30793	250 aa		4.07	□□□□□ -1.76
ATXN3-222	ENST00000553570	AQP2	P41181	271 aa		4.07	□□□□□ -1.76
ATXN3-222	ENST00000553570	GPR4	P46093	362 aa		4.07	□□□□□ -1.76
ATXN3-222	ENST00000553570	CRYBA2	P53672	197 aa		4.07	□□□□□ -1.76
ATXN3-222	ENST00000553570	UGT2B15	P54855	530 aa		4.07	□□□□□ -1.76
ATXN3-222	ENST00000553570	LINC00205	P59089	165 aa		4.07	□□□□□ -1.76
ATXN3-222	ENST00000553570	UBE2N	P61088	152 aa	Known RBP	4.07	□□□□□ -1.76
ATXN3-222	ENST00000553570	TUBA1B	P68363	451 aa		4.07	□□□□□ -1.76
ATXN3-222	ENST00000553570	H3F3A	P84243	136 aa		4.07	□□□□□ -1.76
ATXN3-222	ENST00000553570	SPIB	Q01892	262 aa		4.07	□□□□□ -1.76
ATXN3-222	ENST00000553570	ROR2	Q01974	943 aa	Known RBP	4.07	□□□□□ -1.76
ATXN3-222	ENST00000553570	TGFBR3	Q03167	851 aa		4.07	□□□□□ -1.76
ATXN3-222	ENST00000553570	CHRNB3	Q05901	458 aa		4.07	□□□□□ -1.76
ATXN3-222	ENST00000553570	KEAP1	Q14145	624 aa		4.07	□□□□□ -1.76
ATXN3-222	ENST00000553570	HNF4G	Q14541	408 aa		4.07	□□□□□ -1.76
ATXN3-222	ENST00000553570	MELK	Q14680	651 aa		4.07	□□□□□ -1.76
ATXN3-222	ENST00000553570	SLC17A1	Q14916	467 aa		4.07	□□□□□ -1.76
ATXN3-222	ENST00000553570	P2RY6	Q15077	328 aa		4.07	□□□□□ -1.76
ATXN3-222	ENST00000553570	PDK3	Q15120	406 aa		4.07	□□□□□ -1.76
ATXN3-222	ENST00000553570	PPA1	Q15181	289 aa		4.07	□□□□□ -1.76
ATXN3-222	ENST00000553570	SGCA	Q16586	387 aa		4.07	□□□□□ -1.76
ATXN3-222	ENST00000553570	FBXL19-AS1	Q494R0	122 aa		4.07	□□□□□ -1.76
ATXN3-222	ENST00000553570	TFAP2E	Q6VUC0	442 aa		4.07	□□□□□ -1.76
ATXN3-222	ENST00000553570	WDR88	Q6ZMY6	472 aa		4.07	□□□□□ -1.76
ATXN3-222	ENST00000553570	COLCA1	Q6ZS62	124 aa		4.07	□□□□□ -1.76
ATXN3-222	ENST00000553570		Q6ZT83	130 aa		4.07	□□□□□ -1.76
ATXN3-222	ENST00000553570		Q6ZTK2	550 aa		4.07	□□□□□ -1.76
ATXN3-222	ENST00000553570	TUBA1A	Q71U36	451 aa		4.07	□□□□□ -1.76
ATXN3-222	ENST00000553570	SLC35D2	Q76EJ3	337 aa		4.07	□□□□□ -1.76
ATXN3-222	ENST00000553570	ABHD12B	Q7Z5M8	362 aa	Predicted RBP	4.07	□□□□□ -1.76
ATXN3-222	ENST00000553570	OAF	Q86UD1	273 aa		4.07	□□□□□ -1.76
ATXN3-222	ENST00000553570	CDC20B	Q86Y33	519 aa		4.07	□□□□□ -1.76
ATXN3-222	ENST00000553570	EPHX4	Q8IUS5	362 aa		4.07	□□□□□ -1.76
ATXN3-222	ENST00000553570	ZNF433	Q8N7K0	673 aa	Predicted RBP	4.07	□□□□□ -1.76
ATXN3-222	ENST00000553570	POMGNT2	Q8NAT1	580 aa		4.07	□□□□□ -1.76
ATXN3-222	ENST00000553570	SYT14	Q8NB59	555 aa		4.07	□□□□□ -1.76
ATXN3-222	ENST00000553570	SCCPDH	Q8NBX0	429 aa		4.07	□□□□□ -1.76
ATXN3-222	ENST00000553570	OR5J2	Q8NH18	312 aa		4.07	□□□□□ -1.76
ATXN3-222	ENST00000553570	GEMIN6	Q8WXD5	167 aa	Known RBP	4.07	□□□□□ -1.76
ATXN3-222	ENST00000553570	SGCD	Q92629	289 aa		4.07	□□□□□ -1.76
ATXN3-222	ENST00000553570	CCDC124	Q96CT7	223 aa	Known RBP	4.07	□□□□□ -1.76
ATXN3-222	ENST00000553570	BPIFA2	Q96DR5	249 aa		4.07	□□□□□ -1.76
ATXN3-222	ENST00000553570	ELMOD3	Q96FG2	381 aa		4.07	□□□□□ -1.76
ATXN3-222	ENST00000553570	PGAM5	Q96HS1	289 aa		4.07	□□□□□ -1.76
ATXN3-222	ENST00000553570	TNFRSF13C	Q96RJ3	184 aa		4.07	□□□□□ -1.76
ATXN3-222	ENST00000553570	KCNS3	Q9BQ31	491 aa		4.07	□□□□□ -1.76
ATXN3-222	ENST00000553570	SRSF8	Q9BRL6	282 aa	Known RBP	4.07	□□□□□ -1.76
ATXN3-222	ENST00000553570	TMEM43	Q9BTV4	400 aa		4.07	□□□□□ -1.76
ATXN3-222	ENST00000553570	SF3B5	Q9BWJ5	86 aa	Known RBP	4.07	□□□□□ -1.76
ATXN3-222	ENST00000553570	KCNN2	Q9H2S1	579 aa		4.07	□□□□□ -1.76
ATXN3-222	ENST00000553570	SLCO5A1	Q9H2Y9	848 aa		4.07	□□□□□ -1.76
ATXN3-222	ENST00000553570	RNF121	Q9H920	327 aa		4.07	□□□□□ -1.76
ATXN3-222	ENST00000553570	C12orf10	Q9HB07	376 aa		4.07	□□□□□ -1.76
ATXN3-222	ENST00000553570	DCAF13	Q9NV06	445 aa	Known RBP	4.07	□□□□□ -1.76
ATXN3-222	ENST00000553570	FBXL17	Q9UF56	701 aa		4.07	□□□□□ -1.76
ATXN3-222	ENST00000553570	B3GALT5	Q9Y2C3	310 aa		4.07	□□□□□ -1.76
ATXN3-222	ENST00000553570	PLEKHA6	Q9Y2H5	1048 aa		4.07	□□□□□ -1.76
ATXN3-222	ENST00000553570	ARFGEF3	Q5TH69	2177 aa		4.07	□□□□□ -1.76
ATXN3-222	ENST00000553570	DYSF	O75923	2080 aa		4.06	□□□□□ -1.76
ATXN3-222	ENST00000553570	ITPR2	Q14571	2701 aa		4.06	□□□□□ -1.76
ATXN3-222	ENST00000553570	IGKV3D-15	A0A087WSY6	115 aa		4.06	□□□□□ -1.76
ATXN3-222	ENST00000553570	TRAV27	A0A087WT01	109 aa		4.06	□□□□□ -1.76
ATXN3-222	ENST00000553570	FTCDNL1	E5RQL4	147 aa		4.06	□□□□□ -1.76
ATXN3-222	ENST00000553570	TIMM23	O14925	209 aa		4.06	□□□□□ -1.76
ATXN3-222	ENST00000553570	ARPC2	O15144	300 aa		4.06	□□□□□ -1.76
ATXN3-222	ENST00000553570	OR10H3	O60404	316 aa		4.06	□□□□□ -1.76
ATXN3-222	ENST00000553570	NPIPB7	O75200	414 aa		4.06	□□□□□ -1.76
ATXN3-222	ENST00000553570	LYPD3	O95274	346 aa		4.06	□□□□□ -1.76
ATXN3-222	ENST00000553570	MT-ATP6	P00846	226 aa		4.06	□□□□□ -1.76
ATXN3-222	ENST00000553570	THY1	P04216	161 aa		4.06	□□□□□ -1.76
ATXN3-222	ENST00000553570	FABP3	P05413	133 aa		4.06	□□□□□ -1.76
ATXN3-222	ENST00000553570	T-ENOL	P0DO92	83 aa		4.06	□□□□□ -1.76
ATXN3-222	ENST00000553570	PSG1	P11464	419 aa		4.06	□□□□□ -1.76
ATXN3-222	ENST00000553570	HSD17B1	P14061	328 aa		4.06	□□□□□ -1.76
ATXN3-222	ENST00000553570	RRM2	P31350	389 aa		4.06	□□□□□ -1.76
ATXN3-222	ENST00000553570	ACVR1B	P36896	505 aa		4.06	□□□□□ -1.76
ATXN3-222	ENST00000553570	GUCA1A	P43080	201 aa	Predicted RBP	4.06	□□□□□ -1.76
ATXN3-222	ENST00000553570	CSNK1A1	P48729	337 aa		4.06	□□□□□ -1.76
ATXN3-222	ENST00000553570	SMIM11A	P58511	58 aa		4.06	□□□□□ -1.76
ATXN3-222	ENST00000553570	PRPS1	P60891	318 aa		4.06	□□□□□ -1.76
ATXN3-222	ENST00000553570	ERVK-25	P63136	954 aa		4.06	□□□□□ -1.76
ATXN3-222	ENST00000553570	MS4A2	Q01362	244 aa		4.06	□□□□□ -1.76
ATXN3-222	ENST00000553570	PRKCD	Q05655	676 aa		4.06	□□□□□ -1.76
ATXN3-222	ENST00000553570	RPL18	Q07020	188 aa	Known RBP	4.06	□□□□□ -1.76
ATXN3-222	ENST00000553570	PUDP	Q08623	228 aa		4.06	□□□□□ -1.76
ATXN3-222	ENST00000553570	PPP1R8	Q12972	351 aa	Known RBP	4.06	□□□□□ -1.76

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