RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 ATXN7L1Q9ULK2 861 aaPredicted RBP11.5□□□□□ -0.57
SHMT2-205ENST00000553474 A0A087WZY1 265 aa11.49□□□□□ -0.57
SHMT2-205ENST00000553474 LOC102723996A0A087X1L8 192 aa11.49□□□□□ -0.57
SHMT2-205ENST00000553474 LY6G6EA0A0G2JKS1 128 aa11.49□□□□□ -0.57
SHMT2-205ENST00000553474 DCDC2BA2VCK2 349 aa11.49□□□□□ -0.57
SHMT2-205ENST00000553474 CPED1A4D0V7 1026 aa11.49□□□□□ -0.57
SHMT2-205ENST00000553474 ZNF878C9JN71 531 aa11.49□□□□□ -0.57
SHMT2-205ENST00000553474 H3BUI4 141 aa11.49□□□□□ -0.57
SHMT2-205ENST00000553474 L7N2F9 121 aa11.49□□□□□ -0.57
SHMT2-205ENST00000553474 TIAF1O95411 115 aa11.49□□□□□ -0.57
SHMT2-205ENST00000553474 RLN1P04808 185 aa11.49□□□□□ -0.57
SHMT2-205ENST00000553474 ACSM4P0C7M7 580 aa11.49□□□□□ -0.57
SHMT2-205ENST00000553474 VSIG10L2P0DP72 767 aa11.49□□□□□ -0.57
SHMT2-205ENST00000553474 FGF5P12034 268 aa11.49□□□□□ -0.57
SHMT2-205ENST00000553474 MYF5P13349 255 aa11.49□□□□□ -0.57
SHMT2-205ENST00000553474 TBPP20226 339 aa11.49□□□□□ -0.57
SHMT2-205ENST00000553474 AP2S1P53680 142 aaPredicted RBP11.49□□□□□ -0.57
SHMT2-205ENST00000553474 PMPCAQ10713 525 aa11.49□□□□□ -0.57
SHMT2-205ENST00000553474 CSRP2Q16527 193 aa11.49□□□□□ -0.57
SHMT2-205ENST00000553474 KCNMB1Q16558 191 aa11.49□□□□□ -0.57
SHMT2-205ENST00000553474 LPCAT3Q6P1A2 487 aa11.49□□□□□ -0.57
SHMT2-205ENST00000553474 MRPL14Q6P1L8 145 aaKnown RBP11.49□□□□□ -0.57
SHMT2-205ENST00000553474 ZNF529Q6P280 563 aa11.49□□□□□ -0.57
SHMT2-205ENST00000553474 C16orf47Q6ZP98 133 aaPredicted RBP11.49□□□□□ -0.57
SHMT2-205ENST00000553474 ASCL5Q7RTU5 278 aa11.49□□□□□ -0.57
SHMT2-205ENST00000553474 MDGA2Q7Z553 956 aa11.49□□□□□ -0.57
SHMT2-205ENST00000553474 CCDC28AQ8IWP9 274 aa11.49□□□□□ -0.57
SHMT2-205ENST00000553474 OR2M3Q8NG83 312 aa11.49□□□□□ -0.57
SHMT2-205ENST00000553474 C11orf40Q8WZ69 217 aa11.49□□□□□ -0.57
SHMT2-205ENST00000553474 PPP1R14AQ96A00 147 aa11.49□□□□□ -0.57
SHMT2-205ENST00000553474 OXGR1Q96P68 337 aa11.49□□□□□ -0.57
SHMT2-205ENST00000553474 DPCDQ9BVM2 203 aaPredicted RBP11.49□□□□□ -0.57
SHMT2-205ENST00000553474 GSX2Q9BZM3 304 aa11.49□□□□□ -0.57
SHMT2-205ENST00000553474 EXO5Q9H790 373 aa11.49□□□□□ -0.57
SHMT2-205ENST00000553474 CA10Q9NS85 328 aa11.49□□□□□ -0.57
SHMT2-205ENST00000553474 KIF25Q9UIL4 384 aa11.49□□□□□ -0.57
SHMT2-205ENST00000553474 U3KQA8 63 aa11.49□□□□□ -0.57
SHMT2-205ENST00000553474 FAM186AA6NE01 2351 aa11.49□□□□□ -0.57
SHMT2-205ENST00000553474 ZNF736B4DX44 427 aaPredicted RBP11.49□□□□□ -0.57
SHMT2-205ENST00000553474 H3BML4 177 aa11.49□□□□□ -0.57
SHMT2-205ENST00000553474 H3BSH0 61 aa11.49□□□□□ -0.57
SHMT2-205ENST00000553474 SYT7O43581 403 aa11.49□□□□□ -0.57
SHMT2-205ENST00000553474 RAD1O60671 282 aa11.49□□□□□ -0.57
SHMT2-205ENST00000553474 TOXO94900 526 aa11.49□□□□□ -0.57
SHMT2-205ENST00000553474 DKK1O94907 266 aa11.49□□□□□ -0.57
SHMT2-205ENST00000553474 MPC2O95563 127 aa11.49□□□□□ -0.57
SHMT2-205ENST00000553474 TTRP02766 147 aa11.49□□□□□ -0.57
SHMT2-205ENST00000553474 PGA4P0DJD7 388 aa11.49□□□□□ -0.57
SHMT2-205ENST00000553474 PGA3P0DJD8 388 aa11.49□□□□□ -0.57
SHMT2-205ENST00000553474 CLRN1P58418 232 aa11.49□□□□□ -0.57
SHMT2-205ENST00000553474 CCL7P80098 99 aa11.49□□□□□ -0.57
SHMT2-205ENST00000553474 GUCA2AQ02747 115 aa11.49□□□□□ -0.57
SHMT2-205ENST00000553474 OPCMLQ14982 345 aa11.49□□□□□ -0.57
SHMT2-205ENST00000553474 FAM69BQ5VUD6 431 aa11.49□□□□□ -0.57
SHMT2-205ENST00000553474 B3GNTL1Q67FW5 361 aaPredicted RBP11.49□□□□□ -0.57
SHMT2-205ENST00000553474 ZNF627Q7L945 461 aa11.49□□□□□ -0.57
SHMT2-205ENST00000553474 LINC00346Q8IVM7 164 aa11.49□□□□□ -0.57
SHMT2-205ENST00000553474 NAXDQ8IW45 347 aa11.49□□□□□ -0.57
SHMT2-205ENST00000553474 FADS6Q8N9I5 356 aa11.49□□□□□ -0.57
SHMT2-205ENST00000553474 OR2AJ1Q8NGZ0 328 aa11.49□□□□□ -0.57
SHMT2-205ENST00000553474 POC1BQ8TC44 478 aa11.49□□□□□ -0.57
SHMT2-205ENST00000553474 ELP5Q8TE02 316 aa11.49□□□□□ -0.57
SHMT2-205ENST00000553474 TNFAIP8L1Q8WVP5 186 aa11.49□□□□□ -0.57
SHMT2-205ENST00000553474 AQP3Q92482 292 aa11.49□□□□□ -0.57
SHMT2-205ENST00000553474 FAM46BQ96A09 425 aa11.49□□□□□ -0.57
SHMT2-205ENST00000553474 CCDC74BQ96LY2 380 aa11.49□□□□□ -0.57
SHMT2-205ENST00000553474 NPAS1Q99742 590 aa11.49□□□□□ -0.57
SHMT2-205ENST00000553474 PRRT1Q99946 306 aa11.49□□□□□ -0.57
SHMT2-205ENST00000553474 DEFB126Q9BYW3 111 aa11.49□□□□□ -0.57
SHMT2-205ENST00000553474 PBOV1Q9GZY1 135 aa11.49□□□□□ -0.57
SHMT2-205ENST00000553474 TMEM9BQ9NQ34 198 aa11.49□□□□□ -0.57
SHMT2-205ENST00000553474 CENPMQ9NSP4 180 aa11.49□□□□□ -0.57
SHMT2-205ENST00000553474 GDF2Q9UK05 429 aaPredicted RBP11.49□□□□□ -0.57
SHMT2-205ENST00000553474 SLC5A6Q9Y289 635 aa11.49□□□□□ -0.57
SHMT2-205ENST00000553474 IGKV1D-43A0A0B4J1Z2 117 aa11.48□□□□□ -0.57
SHMT2-205ENST00000553474 RPS10-NUDT3A0A1W2PQS6 291 aa11.48□□□□□ -0.57
SHMT2-205ENST00000553474 TMEM82A0PJX8 343 aa11.48□□□□□ -0.57
SHMT2-205ENST00000553474 C2orf72A6NCS6 295 aa11.48□□□□□ -0.57
SHMT2-205ENST00000553474 MCRIP1C9JLW8 97 aa11.48□□□□□ -0.57
SHMT2-205ENST00000553474 F5H5P2 479 aa11.48□□□□□ -0.57
SHMT2-205ENST00000553474 MEN1O00255 615 aa11.48□□□□□ -0.57
SHMT2-205ENST00000553474 SHOXO15266 292 aa11.48□□□□□ -0.57
SHMT2-205ENST00000553474 SIGLEC6O43699 453 aa11.48□□□□□ -0.57
SHMT2-205ENST00000553474 TLX3O43711 291 aaPredicted RBP11.48□□□□□ -0.57
SHMT2-205ENST00000553474 EFNA2O43921 213 aa11.48□□□□□ -0.57
SHMT2-205ENST00000553474 GDF9O60383 454 aa11.48□□□□□ -0.57
SHMT2-205ENST00000553474 LRP3O75074 770 aa11.48□□□□□ -0.57
SHMT2-205ENST00000553474 OR2J2O76002 312 aa11.48□□□□□ -0.57
SHMT2-205ENST00000553474 RAB3AP20336 220 aa11.48□□□□□ -0.57
SHMT2-205ENST00000553474 P2RY4P51582 365 aa11.48□□□□□ -0.57
SHMT2-205ENST00000553474 SEC61A1P61619 476 aaKnown RBP11.48□□□□□ -0.57
SHMT2-205ENST00000553474 SPOCK1Q08629 439 aa11.48□□□□□ -0.57
SHMT2-205ENST00000553474 TRA2AQ13595 282 aaKnown RBP eCLIP11.48□□□□□ -0.57
SHMT2-205ENST00000553474 HIST3H3Q16695 136 aa11.48□□□□□ -0.57
SHMT2-205ENST00000553474 PGAP1Q75T13 922 aa11.48□□□□□ -0.57
SHMT2-205ENST00000553474 OR2W3Q7Z3T1 314 aa11.48□□□□□ -0.57
SHMT2-205ENST00000553474 ZNF584Q8IVC4 421 aa11.48□□□□□ -0.57
SHMT2-205ENST00000553474 OR1M1Q8NGA1 313 aa11.48□□□□□ -0.57
SHMT2-205ENST00000553474 OR10G3Q8NGC4 313 aa11.48□□□□□ -0.57
SHMT2-205ENST00000553474 OR4D10Q8NGI6 311 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms