RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 SLC7A6Q92536 515 aa8.33□□□□□ -1.08
ACTN1-208ENST00000553370 PTP4A1Q93096 173 aa8.33□□□□□ -1.08
ACTN1-208ENST00000553370 FAM162AQ96A26 154 aa8.33□□□□□ -1.08
ACTN1-208ENST00000553370 RASD2Q96D21 266 aa8.33□□□□□ -1.08
ACTN1-208ENST00000553370 NEIL1Q96FI4 390 aaPredicted RBP8.33□□□□□ -1.08
ACTN1-208ENST00000553370 Q96M85 177 aa8.33□□□□□ -1.08
ACTN1-208ENST00000553370 ZNF583Q96ND8 569 aa8.33□□□□□ -1.08
ACTN1-208ENST00000553370 HCAR1Q9BXC0 346 aa8.33□□□□□ -1.08
ACTN1-208ENST00000553370 SYT4Q9H2B2 425 aa8.33□□□□□ -1.08
ACTN1-208ENST00000553370 MIOXQ9UGB7 285 aa8.33□□□□□ -1.08
ACTN1-208ENST00000553370 A4GNTQ9UNA3 340 aa8.33□□□□□ -1.08
ACTN1-208ENST00000553370 AURKCQ9UQB9 309 aa8.33□□□□□ -1.08
ACTN1-208ENST00000553370 AP3M1Q9Y2T2 418 aa8.33□□□□□ -1.08
ACTN1-208ENST00000553370 STARD10Q9Y365 291 aa8.33□□□□□ -1.08
ACTN1-208ENST00000553370 FAM32AQ9Y421 112 aaKnown RBP8.33□□□□□ -1.08
ACTN1-208ENST00000553370 VWFP04275 2813 aa8.32□□□□□ -1.08
ACTN1-208ENST00000553370 IGHV2-70DA0A0C4DH43 119 aa8.32□□□□□ -1.08
ACTN1-208ENST00000553370 OR6C6A6NF89 314 aa8.32□□□□□ -1.08
ACTN1-208ENST00000553370 TMEM178BH3BS89 294 aa8.32□□□□□ -1.08
ACTN1-208ENST00000553370 J3KTA2 159 aa8.32□□□□□ -1.08
ACTN1-208ENST00000553370 FXYD1O00168 92 aa8.32□□□□□ -1.08
ACTN1-208ENST00000553370 SOCS2O14508 198 aa8.32□□□□□ -1.08
ACTN1-208ENST00000553370 KCNAB3O43448 404 aa8.32□□□□□ -1.08
ACTN1-208ENST00000553370 AHCYL1O43865 530 aa8.32□□□□□ -1.08
ACTN1-208ENST00000553370 GMNNO75496 209 aa8.32□□□□□ -1.08
ACTN1-208ENST00000553370 NDUFB2O95178 105 aa8.32□□□□□ -1.08
ACTN1-208ENST00000553370 IGHV4-38-2P0DP08 117 aa8.32□□□□□ -1.08
ACTN1-208ENST00000553370 RAC2P15153 192 aa8.32□□□□□ -1.08
ACTN1-208ENST00000553370 CTLA4P16410 223 aa8.32□□□□□ -1.08
ACTN1-208ENST00000553370 PITPNBP48739 271 aa8.32□□□□□ -1.08
ACTN1-208ENST00000553370 RAD23AP54725 363 aa8.32□□□□□ -1.08
ACTN1-208ENST00000553370 SUMO1P63165 101 aaKnown RBP8.32□□□□□ -1.08
ACTN1-208ENST00000553370 MALLQ13021 153 aa8.32□□□□□ -1.08
ACTN1-208ENST00000553370 KLF10Q13118 480 aa8.32□□□□□ -1.08
ACTN1-208ENST00000553370 MIDNQ504T8 468 aa8.32□□□□□ -1.08
ACTN1-208ENST00000553370 ANKRD39Q53RE8 183 aa8.32□□□□□ -1.08
ACTN1-208ENST00000553370 MESTQ5EB52 335 aa8.32□□□□□ -1.08
ACTN1-208ENST00000553370 KLF17Q5JT82 389 aaPredicted RBP8.32□□□□□ -1.08
ACTN1-208ENST00000553370 GPR157Q5UAW9 335 aa8.32□□□□□ -1.08
ACTN1-208ENST00000553370 OTPQ5XKR4 325 aa8.32□□□□□ -1.08
ACTN1-208ENST00000553370 OR2T2Q6IF00 324 aa8.32□□□□□ -1.08
ACTN1-208ENST00000553370 LEG1Q6P5S2 330 aa8.32□□□□□ -1.08
ACTN1-208ENST00000553370 Q6ZR03 302 aa8.32□□□□□ -1.08
ACTN1-208ENST00000553370 MBOAT2Q6ZWT7 520 aa8.32□□□□□ -1.08
ACTN1-208ENST00000553370 ADCK1Q86TW2 530 aa8.32□□□□□ -1.08
ACTN1-208ENST00000553370 KLBQ86Z14 1044 aa8.32□□□□□ -1.08
ACTN1-208ENST00000553370 RNF113BQ8IZP6 322 aaKnown RBP8.32□□□□□ -1.08
ACTN1-208ENST00000553370 BVESQ8NE79 360 aa8.32□□□□□ -1.08
ACTN1-208ENST00000553370 APOBEC3DQ96AK3 386 aaPredicted RBP8.32□□□□□ -1.08
ACTN1-208ENST00000553370 RCN3Q96D15 328 aa8.32□□□□□ -1.08
ACTN1-208ENST00000553370 HAVCR1Q96D42 359 aa8.32□□□□□ -1.08
ACTN1-208ENST00000553370 FAM46AQ96IP4 442 aaKnown RBP8.32□□□□□ -1.08
ACTN1-208ENST00000553370 MEGF10Q96KG7 1140 aa8.32□□□□□ -1.08
ACTN1-208ENST00000553370 CLUHP3Q96NS8 147 aa8.32□□□□□ -1.08
ACTN1-208ENST00000553370 TECTBQ96PL2 329 aa8.32□□□□□ -1.08
ACTN1-208ENST00000553370 GCM1Q9NP62 436 aa8.32□□□□□ -1.08
ACTN1-208ENST00000553370 CLN8Q9UBY8 286 aa8.32□□□□□ -1.08
ACTN1-208ENST00000553370 KLHL21Q9UJP4 597 aa8.32□□□□□ -1.08
ACTN1-208ENST00000553370 F5H0A9 414 aaPredicted RBP8.31□□□□□ -1.08
ACTN1-208ENST00000553370 F5H5P2 479 aa8.31□□□□□ -1.08
ACTN1-208ENST00000553370 CXCR6O00574 342 aa8.31□□□□□ -1.08
ACTN1-208ENST00000553370 PRODHO43272 600 aa8.31□□□□□ -1.08
ACTN1-208ENST00000553370 RENP00797 406 aa8.31□□□□□ -1.08
ACTN1-208ENST00000553370 SERPINA1P01009 418 aa8.31□□□□□ -1.08
ACTN1-208ENST00000553370 KNG1P01042 644 aa8.31□□□□□ -1.08
ACTN1-208ENST00000553370 HLA-DQA2P01906 255 aa8.31□□□□□ -1.08
ACTN1-208ENST00000553370 SELEP16581 610 aa8.31□□□□□ -1.08
ACTN1-208ENST00000553370 OMGP23515 440 aa8.31□□□□□ -1.08
ACTN1-208ENST00000553370 FPR3P25089 353 aa8.31□□□□□ -1.08
ACTN1-208ENST00000553370 SDHAP31040 664 aa8.31□□□□□ -1.08
ACTN1-208ENST00000553370 RBMXP38159 391 aaKnown RBP8.31□□□□□ -1.08
ACTN1-208ENST00000553370 ERFP50548 548 aa8.31□□□□□ -1.08
ACTN1-208ENST00000553370 RPS6KA3P51812 740 aa8.31□□□□□ -1.08
ACTN1-208ENST00000553370 LSM6P62312 80 aaKnown RBP8.31□□□□□ -1.08
ACTN1-208ENST00000553370 DEFA6Q01524 100 aa8.31□□□□□ -1.08
ACTN1-208ENST00000553370 KRT72Q14CN4 511 aa8.31□□□□□ -1.08
ACTN1-208ENST00000553370 SLC9A3R2Q15599 337 aa8.31□□□□□ -1.08
ACTN1-208ENST00000553370 GPR139Q6DWJ6 353 aa8.31□□□□□ -1.08
ACTN1-208ENST00000553370 FDX2Q6P4F2 183 aa8.31□□□□□ -1.08
ACTN1-208ENST00000553370 PGM2L1Q6PCE3 622 aa8.31□□□□□ -1.08
ACTN1-208ENST00000553370 BOLLQ8N9W6 283 aaKnown RBP8.31□□□□□ -1.08
ACTN1-208ENST00000553370 GJC3Q8NFK1 279 aa8.31□□□□□ -1.08
ACTN1-208ENST00000553370 OR8G5Q8NG78 346 aa8.31□□□□□ -1.08
ACTN1-208ENST00000553370 FANK1Q8TC84 345 aa8.31□□□□□ -1.08
ACTN1-208ENST00000553370 SPRYD4Q8WW59 207 aaPredicted RBP8.31□□□□□ -1.08
ACTN1-208ENST00000553370 RAB40AQ8WXH6 277 aa8.31□□□□□ -1.08
ACTN1-208ENST00000553370 RSRC1Q96IZ7 334 aaKnown RBP8.31□□□□□ -1.08
ACTN1-208ENST00000553370 NUDT16L1Q9BRJ7 211 aaKnown RBP8.31□□□□□ -1.08
ACTN1-208ENST00000553370 PCGF1Q9BSM1 259 aa8.31□□□□□ -1.08
ACTN1-208ENST00000553370 CDADC1Q9BWV3 514 aa8.31□□□□□ -1.08
ACTN1-208ENST00000553370 NSRP1Q9H0G5 558 aaKnown RBP8.31□□□□□ -1.08
ACTN1-208ENST00000553370 HDHD2Q9H0R4 259 aa8.31□□□□□ -1.08
ACTN1-208ENST00000553370 TMEM100Q9NV29 134 aa8.31□□□□□ -1.08
ACTN1-208ENST00000553370 FGFR1OP2Q9NVK5 253 aa8.31□□□□□ -1.08
ACTN1-208ENST00000553370 ATPIF1Q9UII2 106 aa8.31□□□□□ -1.08
ACTN1-208ENST00000553370 RPS6KA6Q9UK32 745 aa8.31□□□□□ -1.08
ACTN1-208ENST00000553370 COA3Q9Y2R0 106 aaPredicted RBP8.31□□□□□ -1.08
ACTN1-208ENST00000553370 TET2Q6N021 2002 aaPredicted RBP8.3□□□□□ -1.08
ACTN1-208ENST00000553370 A0A087WUU8 490 aa8.3□□□□□ -1.08
ACTN1-208ENST00000553370 MDFIC2A0A1B0GVS7 189 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms