RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 RNF138Q8WVD3 245 aa3.38□□□□□ -1.87
SCFD1-209ENST00000553280 DYNLL2Q96FJ2 89 aa3.38□□□□□ -1.87
SCFD1-209ENST00000553280 RNF145Q96MT1 663 aa3.38□□□□□ -1.87
SCFD1-209ENST00000553280 TAAR1Q96RJ0 339 aa3.38□□□□□ -1.87
SCFD1-209ENST00000553280 TM6SF2Q9BZW4 377 aa3.38□□□□□ -1.87
SCFD1-209ENST00000553280 MROH7Q68CQ1 1323 aa3.38□□□□□ -1.87
SCFD1-209ENST00000553280 LTBP1Q14766 1721 aa3.37□□□□□ -1.87
SCFD1-209ENST00000553280 IGHV3-74A0A0B4J1X5 117 aa3.37□□□□□ -1.87
SCFD1-209ENST00000553280 ERICH4A6NGS2 130 aa3.37□□□□□ -1.87
SCFD1-209ENST00000553280 H7C417 338 aa3.37□□□□□ -1.87
SCFD1-209ENST00000553280 GABRPO00591 440 aa3.37□□□□□ -1.87
SCFD1-209ENST00000553280 POLR1CO15160 346 aaPredicted RBP3.37□□□□□ -1.87
SCFD1-209ENST00000553280 RDH16O75452 317 aa3.37□□□□□ -1.87
SCFD1-209ENST00000553280 SLC25A27O95847 323 aa3.37□□□□□ -1.87
SCFD1-209ENST00000553280 HOXC4P09017 264 aaPredicted RBP3.37□□□□□ -1.87
SCFD1-209ENST00000553280 PGA5P0DJD9 388 aa3.37□□□□□ -1.87
SCFD1-209ENST00000553280 GABRG2P18507 467 aa3.37□□□□□ -1.87
SCFD1-209ENST00000553280 RAB3AP20336 220 aa3.37□□□□□ -1.87
SCFD1-209ENST00000553280 IVDP26440 423 aa3.37□□□□□ -1.87
SCFD1-209ENST00000553280 HOXA9P31269 272 aa3.37□□□□□ -1.87
SCFD1-209ENST00000553280 P2RX1P51575 399 aa3.37□□□□□ -1.87
SCFD1-209ENST00000553280 PPP1CBP62140 327 aa3.37□□□□□ -1.87
SCFD1-209ENST00000553280 PSMC5P62195 406 aa3.37□□□□□ -1.87
SCFD1-209ENST00000553280 GINS1Q14691 196 aa3.37□□□□□ -1.87
SCFD1-209ENST00000553280 PON2Q15165 354 aa3.37□□□□□ -1.87
SCFD1-209ENST00000553280 RGNQ15493 299 aa3.37□□□□□ -1.87
SCFD1-209ENST00000553280 METTL21CQ5VZV1 264 aa3.37□□□□□ -1.87
SCFD1-209ENST00000553280 C16orf87Q6PH81 154 aa3.37□□□□□ -1.87
SCFD1-209ENST00000553280 PLET1Q6UQ28 207 aa3.37□□□□□ -1.87
SCFD1-209ENST00000553280 ARRDC1Q8N5I2 433 aa3.37□□□□□ -1.87
SCFD1-209ENST00000553280 SPERTQ8NA61 448 aa3.37□□□□□ -1.87
SCFD1-209ENST00000553280 C11orf72Q8NBR9 251 aa3.37□□□□□ -1.87
SCFD1-209ENST00000553280 DUSP18Q8NEJ0 188 aa3.37□□□□□ -1.87
SCFD1-209ENST00000553280 MSANTD3Q96H12 275 aa3.37□□□□□ -1.87
SCFD1-209ENST00000553280 BTN2A3PQ96KV6 586 aa3.37□□□□□ -1.87
SCFD1-209ENST00000553280 ZNF681Q96N22 645 aa3.37□□□□□ -1.87
SCFD1-209ENST00000553280 MTFP1Q9UDX5 166 aa3.37□□□□□ -1.87
SCFD1-209ENST00000553280 MAP3K15Q6ZN16 1313 aa3.37□□□□□ -1.87
SCFD1-209ENST00000553280 LOC100506127A0A0U1RQW1 187 aa3.36□□□□□ -1.87
SCFD1-209ENST00000553280 ZNF879B4DU55 563 aa3.36□□□□□ -1.87
SCFD1-209ENST00000553280 ANKRD65E5RJM6 399 aa3.36□□□□□ -1.87
SCFD1-209ENST00000553280 H7C1H1 209 aa3.36□□□□□ -1.87
SCFD1-209ENST00000553280 PSMD11O00231 422 aa3.36□□□□□ -1.87
SCFD1-209ENST00000553280 CDC40O60508 579 aaKnown RBP eCLIP3.36□□□□□ -1.87
SCFD1-209ENST00000553280 NEMFO60524 1076 aa3.36□□□□□ -1.87
SCFD1-209ENST00000553280 GMDSO60547 372 aa3.36□□□□□ -1.87
SCFD1-209ENST00000553280 CA11O75493 328 aa3.36□□□□□ -1.87
SCFD1-209ENST00000553280 CATP04040 527 aaKnown RBP3.36□□□□□ -1.87
SCFD1-209ENST00000553280 HLA-DPB1P04440 258 aa3.36□□□□□ -1.87
SCFD1-209ENST00000553280 CD3GP09693 182 aa3.36□□□□□ -1.87
SCFD1-209ENST00000553280 PGA4P0DJD7 388 aa3.36□□□□□ -1.87
SCFD1-209ENST00000553280 PGA3P0DJD8 388 aa3.36□□□□□ -1.87
SCFD1-209ENST00000553280 PRPS2P11908 318 aa3.36□□□□□ -1.87
SCFD1-209ENST00000553280 CSNK1A1P48729 337 aa3.36□□□□□ -1.87
SCFD1-209ENST00000553280 RAB7AP51149 207 aa3.36□□□□□ -1.87
SCFD1-209ENST00000553280 TAS2R39P59534 338 aa3.36□□□□□ -1.87
SCFD1-209ENST00000553280 RPS23P62266 143 aaKnown RBP3.36□□□□□ -1.87
SCFD1-209ENST00000553280 KIR2DS1Q14954 304 aa3.36□□□□□ -1.87
SCFD1-209ENST00000553280 Q3ZCU0 254 aa3.36□□□□□ -1.87
SCFD1-209ENST00000553280 LIN9Q5TKA1 542 aa3.36□□□□□ -1.87
SCFD1-209ENST00000553280 PCP2Q8IVA1 136 aa3.36□□□□□ -1.87
SCFD1-209ENST00000553280 Q8N976 141 aa3.36□□□□□ -1.87
SCFD1-209ENST00000553280 ZFP90Q8TF47 636 aa3.36□□□□□ -1.87
SCFD1-209ENST00000553280 LRRC29Q8WV35 223 aa3.36□□□□□ -1.87
SCFD1-209ENST00000553280 BAALCQ8WXS3 180 aa3.36□□□□□ -1.87
SCFD1-209ENST00000553280 NTAN1Q96AB6 310 aa3.36□□□□□ -1.87
SCFD1-209ENST00000553280 FAM131CQ96AQ9 280 aa3.36□□□□□ -1.87
SCFD1-209ENST00000553280 EXOSC8Q96B26 276 aaKnown RBP3.36□□□□□ -1.87
SCFD1-209ENST00000553280 ZIM3Q96PE6 472 aa3.36□□□□□ -1.87
SCFD1-209ENST00000553280 CHAC1Q9BUX1 264 aa3.36□□□□□ -1.87
SCFD1-209ENST00000553280 CHID1Q9BWS9 393 aa3.36□□□□□ -1.87
SCFD1-209ENST00000553280 ARMC7Q9H6L4 198 aa3.36□□□□□ -1.87
SCFD1-209ENST00000553280 TRMT112Q9UI30 125 aaKnown RBP3.36□□□□□ -1.87
SCFD1-209ENST00000553280 PRG3Q9Y2Y8 225 aaPredicted RBP3.36□□□□□ -1.87
SCFD1-209ENST00000553280 MN1Q10571 1320 aaPredicted RBP3.36□□□□□ -1.87
SCFD1-209ENST00000553280 SBNO1A3KN83 1393 aa3.36□□□□□ -1.87
SCFD1-209ENST00000553280 AQRO60306 1485 aaKnown RBP eCLIP3.35□□□□□ -1.87
SCFD1-209ENST00000553280 IGHV3-66A0A0C4DH42 116 aa3.35□□□□□ -1.87
SCFD1-209ENST00000553280 PINLYPA6NC86 204 aa3.35□□□□□ -1.87
SCFD1-209ENST00000553280 SYCE1LA8MT33 242 aa3.35□□□□□ -1.87
SCFD1-209ENST00000553280 NVLO15381 856 aaKnown RBP3.35□□□□□ -1.87
SCFD1-209ENST00000553280 GABARAPO95166 117 aa3.35□□□□□ -1.87
SCFD1-209ENST00000553280 CTSLP07711 333 aa3.35□□□□□ -1.87
SCFD1-209ENST00000553280 ADRB3P13945 408 aa3.35□□□□□ -1.87
SCFD1-209ENST00000553280 TCP1P17987 556 aaKnown RBP3.35□□□□□ -1.87
SCFD1-209ENST00000553280 PFN2P35080 140 aa3.35□□□□□ -1.87
SCFD1-209ENST00000553280 HCAR3P49019 387 aa3.35□□□□□ -1.87
SCFD1-209ENST00000553280 UBE2AP49459 152 aa3.35□□□□□ -1.87
SCFD1-209ENST00000553280 CCR6P51684 374 aa3.35□□□□□ -1.87
SCFD1-209ENST00000553280 AP1S2P56377 157 aa3.35□□□□□ -1.87
SCFD1-209ENST00000553280 UBE2NP61088 152 aaKnown RBP3.35□□□□□ -1.87
SCFD1-209ENST00000553280 CKAP4Q07065 602 aaKnown RBP3.35□□□□□ -1.87
SCFD1-209ENST00000553280 SLAQ13239 276 aa3.35□□□□□ -1.87
SCFD1-209ENST00000553280 DGCR6Q14129 220 aa3.35□□□□□ -1.87
SCFD1-209ENST00000553280 ZNF266Q14584 549 aa3.35□□□□□ -1.87
SCFD1-209ENST00000553280 RNF175Q8N4F7 328 aa3.35□□□□□ -1.87
SCFD1-209ENST00000553280 METTL13Q8N6R0 699 aa3.35□□□□□ -1.87
SCFD1-209ENST00000553280 OR10W1Q8NGF6 305 aa3.35□□□□□ -1.87
SCFD1-209ENST00000553280 RGP1Q92546 391 aaPredicted RBP3.35□□□□□ -1.87
SCFD1-209ENST00000553280 TFGQ92734 400 aaPredicted RBP3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms