RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 OR1J2Q8NGS2 313 aa12.39□□□□□ -0.43
RAB3IP-216ENST00000552199 OR51E1Q8TCB6 317 aa12.39□□□□□ -0.43
RAB3IP-216ENST00000552199 INTS12Q96CB8 462 aaKnown RBP12.39□□□□□ -0.43
RAB3IP-216ENST00000552199 ADAT3Q96EY9 351 aaPredicted RBP12.39□□□□□ -0.43
RAB3IP-216ENST00000552199 ZNF416Q9BWM5 594 aa12.39□□□□□ -0.43
RAB3IP-216ENST00000552199 C20orf85Q9H1P6 137 aa12.39□□□□□ -0.43
RAB3IP-216ENST00000552199 OR51J1Q9H342 316 aa12.39□□□□□ -0.43
RAB3IP-216ENST00000552199 STMN3Q9NZ72 180 aa12.39□□□□□ -0.43
RAB3IP-216ENST00000552199 MTFP1Q9UDX5 166 aa12.39□□□□□ -0.43
RAB3IP-216ENST00000552199 MRPS18CQ9Y3D5 142 aaKnown RBP12.39□□□□□ -0.43
RAB3IP-216ENST00000552199 RHBDD3Q9Y3P4 386 aa12.39□□□□□ -0.43
RAB3IP-216ENST00000552199 LDLRAD4O15165 306 aa12.39□□□□□ -0.43
RAB3IP-216ENST00000552199 SMAD9O15198 467 aaKnown RBP12.39□□□□□ -0.43
RAB3IP-216ENST00000552199 GABRA1P14867 456 aa12.39□□□□□ -0.43
RAB3IP-216ENST00000552199 CNR1P21554 472 aa12.39□□□□□ -0.43
RAB3IP-216ENST00000552199 STOMP27105 288 aa12.39□□□□□ -0.43
RAB3IP-216ENST00000552199 BDKRB2P30411 391 aa12.39□□□□□ -0.43
RAB3IP-216ENST00000552199 GNALP38405 381 aa12.39□□□□□ -0.43
RAB3IP-216ENST00000552199 ZNF121P58317 390 aaPredicted RBP12.39□□□□□ -0.43
RAB3IP-216ENST00000552199 GRB2P62993 217 aaKnown RBP12.39□□□□□ -0.43
RAB3IP-216ENST00000552199 OC90Q02509 493 aaPredicted RBP12.39□□□□□ -0.43
RAB3IP-216ENST00000552199 SF3B4Q15427 424 aaKnown RBP eCLIP12.39□□□□□ -0.43
RAB3IP-216ENST00000552199 FCN2Q15485 313 aa12.39□□□□□ -0.43
RAB3IP-216ENST00000552199 JMJD6Q6NYC1 403 aaPredicted RBP12.39□□□□□ -0.43
RAB3IP-216ENST00000552199 CDH24Q86UP0 819 aa12.39□□□□□ -0.43
RAB3IP-216ENST00000552199 GGNQ86UU5 652 aa12.39□□□□□ -0.43
RAB3IP-216ENST00000552199 OR1M1Q8NGA1 313 aa12.39□□□□□ -0.43
RAB3IP-216ENST00000552199 SORCS2Q96PQ0 1159 aa12.39□□□□□ -0.43
RAB3IP-216ENST00000552199 EDEM2Q9BV94 578 aa12.39□□□□□ -0.43
RAB3IP-216ENST00000552199 SF3B5Q9BWJ5 86 aaKnown RBP12.39□□□□□ -0.43
RAB3IP-216ENST00000552199 NELFAQ9H3P2 528 aa12.39□□□□□ -0.43
RAB3IP-216ENST00000552199 FOXD3Q9UJU5 478 aaPredicted RBP12.39□□□□□ -0.43
RAB3IP-216ENST00000552199 DHHO43323 396 aa12.38□□□□□ -0.43
RAB3IP-216ENST00000552199 C1QBP02746 253 aa12.38□□□□□ -0.43
RAB3IP-216ENST00000552199 ALDOBP05062 364 aa12.38□□□□□ -0.43
RAB3IP-216ENST00000552199 CTSSP25774 331 aa12.38□□□□□ -0.43
RAB3IP-216ENST00000552199 SELENOPP49908 381 aa12.38□□□□□ -0.43
RAB3IP-216ENST00000552199 CARD18P57730 90 aa12.38□□□□□ -0.43
RAB3IP-216ENST00000552199 ENDOGQ14249 297 aaKnown RBP12.38□□□□□ -0.43
RAB3IP-216ENST00000552199 CD276Q5ZPR3 534 aa12.38□□□□□ -0.43
RAB3IP-216ENST00000552199 ZNF529Q6P280 563 aa12.38□□□□□ -0.43
RAB3IP-216ENST00000552199 ADGRE4PQ86SQ3 457 aa12.38□□□□□ -0.43
RAB3IP-216ENST00000552199 OR8B12Q8NGG6 310 aa12.38□□□□□ -0.43
RAB3IP-216ENST00000552199 OR5D14Q8NGL3 314 aa12.38□□□□□ -0.43
RAB3IP-216ENST00000552199 GIMAP1Q8WWP7 306 aa12.38□□□□□ -0.43
RAB3IP-216ENST00000552199 DEDD2Q8WXF8 326 aa12.38□□□□□ -0.43
RAB3IP-216ENST00000552199 PTX4Q96A99 478 aa12.38□□□□□ -0.43
RAB3IP-216ENST00000552199 PNPLA2Q96AD5 504 aa12.38□□□□□ -0.43
RAB3IP-216ENST00000552199 NABP1Q96AH0 204 aa12.38□□□□□ -0.43
RAB3IP-216ENST00000552199 TMEM9BQ9NQ34 198 aa12.38□□□□□ -0.43
RAB3IP-216ENST00000552199 NKIRAS2Q9NYR9 191 aa12.38□□□□□ -0.43
RAB3IP-216ENST00000552199 RGS13O14921 159 aa12.37□□□□□ -0.43
RAB3IP-216ENST00000552199 PEX14O75381 377 aa12.37□□□□□ -0.43
RAB3IP-216ENST00000552199 TRAPPC6AO75865 159 aa12.37□□□□□ -0.43
RAB3IP-216ENST00000552199 SLC2A1P11166 492 aa12.37□□□□□ -0.43
RAB3IP-216ENST00000552199 ERP29P30040 261 aaKnown RBP12.37□□□□□ -0.43
RAB3IP-216ENST00000552199 PRSS3P35030 304 aa12.37□□□□□ -0.43
RAB3IP-216ENST00000552199 CX3CR1P49238 355 aa12.37□□□□□ -0.43
RAB3IP-216ENST00000552199 GZMKP49863 264 aa12.37□□□□□ -0.43
RAB3IP-216ENST00000552199 CAPZA1P52907 286 aa12.37□□□□□ -0.43
RAB3IP-216ENST00000552199 CDK10Q15131 360 aa12.37□□□□□ -0.43
RAB3IP-216ENST00000552199 WIPI1Q5MNZ9 446 aaPredicted RBP12.37□□□□□ -0.43
RAB3IP-216ENST00000552199 DHRS13Q6UX07 377 aa12.37□□□□□ -0.43
RAB3IP-216ENST00000552199 C20orf196Q8IYI0 205 aa12.37□□□□□ -0.43
RAB3IP-216ENST00000552199 ZNF283Q8N7M2 679 aa12.37□□□□□ -0.43
RAB3IP-216ENST00000552199 GJC3Q8NFK1 279 aa12.37□□□□□ -0.43
RAB3IP-216ENST00000552199 OR4D6Q8NGJ1 314 aa12.37□□□□□ -0.43
RAB3IP-216ENST00000552199 SLC39A7Q92504 469 aa12.37□□□□□ -0.43
RAB3IP-216ENST00000552199 SFXN2Q96NB2 322 aa12.37□□□□□ -0.43
RAB3IP-216ENST00000552199 TRAF4Q9BUZ4 470 aaPredicted RBP12.37□□□□□ -0.43
RAB3IP-216ENST00000552199 ZFP64Q9NPA5 681 aa12.37□□□□□ -0.43
RAB3IP-216ENST00000552199 TMEM138Q9NPI0 162 aa12.37□□□□□ -0.43
RAB3IP-216ENST00000552199 PAQR5Q9NXK6 330 aaPredicted RBP12.37□□□□□ -0.43
RAB3IP-216ENST00000552199 TAS2R8Q9NYW2 309 aa12.37□□□□□ -0.43
RAB3IP-216ENST00000552199 LRFN1Q9P244 771 aa12.37□□□□□ -0.43
RAB3IP-216ENST00000552199 ZNF319Q9P2F9 582 aa12.37□□□□□ -0.43
RAB3IP-216ENST00000552199 FLVCR2Q9UPI3 526 aa12.37□□□□□ -0.43
RAB3IP-216ENST00000552199 NCOA6Q14686 2063 aaPredicted RBP12.37□□□□□ -0.43
RAB3IP-216ENST00000552199 PINLYPA6NC86 204 aa12.37□□□□□ -0.43
RAB3IP-216ENST00000552199 FAM172BPA6NC97 362 aa12.37□□□□□ -0.43
RAB3IP-216ENST00000552199 F10P00742 488 aa12.37□□□□□ -0.43
RAB3IP-216ENST00000552199 CSF1P09603 554 aa12.37□□□□□ -0.43
RAB3IP-216ENST00000552199 RAB3AP20336 220 aa12.37□□□□□ -0.43
RAB3IP-216ENST00000552199 SDHBP21912 280 aa12.37□□□□□ -0.43
RAB3IP-216ENST00000552199 CD96P40200 585 aa12.37□□□□□ -0.43
RAB3IP-216ENST00000552199 HIST1H3AP68431 136 aa12.37□□□□□ -0.43
RAB3IP-216ENST00000552199 GUCA2AQ02747 115 aa12.37□□□□□ -0.43
RAB3IP-216ENST00000552199 FOXO1Q12778 655 aa12.37□□□□□ -0.43
RAB3IP-216ENST00000552199 FAPQ12884 760 aa12.37□□□□□ -0.43
RAB3IP-216ENST00000552199 ST3GAL2Q16842 350 aa12.37□□□□□ -0.43
RAB3IP-216ENST00000552199 PCGF3Q3KNV8 242 aa12.37□□□□□ -0.43
RAB3IP-216ENST00000552199 HIST2H3PS2Q5TEC6 136 aa12.37□□□□□ -0.43
RAB3IP-216ENST00000552199 SPINK14Q6IE38 97 aa12.37□□□□□ -0.43
RAB3IP-216ENST00000552199 HIST2H3AQ71DI3 136 aa12.37□□□□□ -0.43
RAB3IP-216ENST00000552199 OR52N4Q8NGI2 321 aa12.37□□□□□ -0.43
RAB3IP-216ENST00000552199 OR2V1Q8NHB1 315 aa12.37□□□□□ -0.43
RAB3IP-216ENST00000552199 RBM24Q9BX46 236 aaKnown RBP12.37□□□□□ -0.43
RAB3IP-216ENST00000552199 CNTD2Q9H8S5 307 aa12.37□□□□□ -0.43
RAB3IP-216ENST00000552199 BOLA1Q9Y3E2 137 aa12.37□□□□□ -0.43
RAB3IP-216ENST00000552199 PCDHGA1Q9Y5H4 931 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms