RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 LCN1P1Q5VSP4 162 aa9.11□□□□□ -0.95
PTCH1-225ENST00000551845 NXNL2Q5VZ03 156 aa9.11□□□□□ -0.95
PTCH1-225ENST00000551845 MBNL2Q5VZF2 373 aaKnown RBP9.11□□□□□ -0.95
PTCH1-225ENST00000551845 RHOUQ7L0Q8 258 aa9.11□□□□□ -0.95
PTCH1-225ENST00000551845 MEPCEQ7L2J0 689 aaKnown RBP9.11□□□□□ -0.95
PTCH1-225ENST00000551845 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.11□□□□□ -0.95
PTCH1-225ENST00000551845 TIGD4Q8IY51 512 aa9.11□□□□□ -0.95
PTCH1-225ENST00000551845 BBS1Q8NFJ9 593 aa9.11□□□□□ -0.95
PTCH1-225ENST00000551845 OR8J1Q8NGP2 316 aa9.11□□□□□ -0.95
PTCH1-225ENST00000551845 SLAMF6Q96DU3 332 aa9.11□□□□□ -0.95
PTCH1-225ENST00000551845 KCNJ15Q99712 375 aa9.11□□□□□ -0.95
PTCH1-225ENST00000551845 PNRC2Q9NPJ4 139 aaKnown RBP9.11□□□□□ -0.95
PTCH1-225ENST00000551845 STARD10Q9Y365 291 aa9.11□□□□□ -0.95
PTCH1-225ENST00000551845 ROS1P08922 2347 aa9.11□□□□□ -0.95
PTCH1-225ENST00000551845 PLSCR5A0PG75 271 aa9.1□□□□□ -0.95
PTCH1-225ENST00000551845 SLC22A31A6NKX4 558 aa9.1□□□□□ -0.95
PTCH1-225ENST00000551845 H3BSA7 217 aa9.1□□□□□ -0.95
PTCH1-225ENST00000551845 LY6G6DO95868 133 aa9.1□□□□□ -0.95
PTCH1-225ENST00000551845 IGHV3-13P01766 116 aa9.1□□□□□ -0.95
PTCH1-225ENST00000551845 APOC1P02654 83 aa9.1□□□□□ -0.95
PTCH1-225ENST00000551845 LCATP04180 440 aa9.1□□□□□ -0.95
PTCH1-225ENST00000551845 LYNP07948 512 aa9.1□□□□□ -0.95
PTCH1-225ENST00000551845 ACSM4P0C7M7 580 aa9.1□□□□□ -0.95
PTCH1-225ENST00000551845 SLC2A5P22732 501 aa9.1□□□□□ -0.95
PTCH1-225ENST00000551845 ALDH3B1P43353 468 aa9.1□□□□□ -0.95
PTCH1-225ENST00000551845 GRB2P62993 217 aaKnown RBP9.1□□□□□ -0.95
PTCH1-225ENST00000551845 MALLQ13021 153 aa9.1□□□□□ -0.95
PTCH1-225ENST00000551845 AADACL4Q5VUY2 407 aa9.1□□□□□ -0.95
PTCH1-225ENST00000551845 DMRTA1Q5VZB9 504 aa9.1□□□□□ -0.95
PTCH1-225ENST00000551845 SLC16A9Q7RTY1 509 aa9.1□□□□□ -0.95
PTCH1-225ENST00000551845 NAA40Q86UY6 237 aa9.1□□□□□ -0.95
PTCH1-225ENST00000551845 ZCCHC24Q8N2G6 241 aaKnown RBP9.1□□□□□ -0.95
PTCH1-225ENST00000551845 OTOSQ8NHW6 89 aa9.1□□□□□ -0.95
PTCH1-225ENST00000551845 SNX33Q8WV41 574 aa9.1□□□□□ -0.95
PTCH1-225ENST00000551845 HAVCR1Q96D42 359 aa9.1□□□□□ -0.95
PTCH1-225ENST00000551845 CMBLQ96DG6 245 aa9.1□□□□□ -0.95
PTCH1-225ENST00000551845 HRASLS5Q96KN8 279 aa9.1□□□□□ -0.95
PTCH1-225ENST00000551845 Q96MF0 132 aa9.1□□□□□ -0.95
PTCH1-225ENST00000551845 RHNO1Q9BSD3 238 aa9.1□□□□□ -0.95
PTCH1-225ENST00000551845 COPS4Q9BT78 406 aa9.1□□□□□ -0.95
PTCH1-225ENST00000551845 ABHD6Q9BV23 337 aa9.1□□□□□ -0.95
PTCH1-225ENST00000551845 YIPF3Q9GZM5 350 aa9.1□□□□□ -0.95
PTCH1-225ENST00000551845 TOR3AQ9H497 397 aa9.1□□□□□ -0.95
PTCH1-225ENST00000551845 DCLRE1BQ9H816 532 aa9.1□□□□□ -0.95
PTCH1-225ENST00000551845 SP140LQ9H930 580 aa9.1□□□□□ -0.95
PTCH1-225ENST00000551845 C8orf4Q9NR00 106 aa9.1□□□□□ -0.95
PTCH1-225ENST00000551845 CYSLTR2Q9NS75 346 aa9.1□□□□□ -0.95
PTCH1-225ENST00000551845 DDX28Q9NUL7 540 aaKnown RBP9.1□□□□□ -0.95
PTCH1-225ENST00000551845 IMPAD1Q9NX62 359 aa9.1□□□□□ -0.95
PTCH1-225ENST00000551845 LAMP5Q9UJQ1 280 aa9.1□□□□□ -0.95
PTCH1-225ENST00000551845 TMEM14AQ9Y6G1 99 aa9.1□□□□□ -0.95
PTCH1-225ENST00000551845 AKAP6Q13023 2319 aa9.09□□□□□ -0.95
PTCH1-225ENST00000551845 ZNF878C9JN71 531 aa9.09□□□□□ -0.95
PTCH1-225ENST00000551845 M0R135 149 aa9.09□□□□□ -0.95
PTCH1-225ENST00000551845 SELENOFO60613 162 aa9.09□□□□□ -0.95
PTCH1-225ENST00000551845 H2BFMP0C1H6 154 aa9.09□□□□□ -0.95
PTCH1-225ENST00000551845 NAT2P11245 290 aa9.09□□□□□ -0.95
PTCH1-225ENST00000551845 RAC2P15153 192 aa9.09□□□□□ -0.95
PTCH1-225ENST00000551845 HSD11B1P28845 292 aa9.09□□□□□ -0.95
PTCH1-225ENST00000551845 ATP6V1E1P36543 226 aa9.09□□□□□ -0.95
PTCH1-225ENST00000551845 MPV17P39210 176 aa9.09□□□□□ -0.95
PTCH1-225ENST00000551845 NAA10P41227 235 aaPredicted RBP9.09□□□□□ -0.95
PTCH1-225ENST00000551845 SLC6A9P48067 706 aa9.09□□□□□ -0.95
PTCH1-225ENST00000551845 PRKXP51817 358 aa9.09□□□□□ -0.95
PTCH1-225ENST00000551845 PRSS12P56730 875 aa9.09□□□□□ -0.95
PTCH1-225ENST00000551845 ELF3P78545 371 aaPredicted RBP9.09□□□□□ -0.95
PTCH1-225ENST00000551845 PSG7Q13046 419 aa9.09□□□□□ -0.95
PTCH1-225ENST00000551845 RCN1Q15293 331 aa9.09□□□□□ -0.95
PTCH1-225ENST00000551845 TRIP10Q15642 601 aa9.09□□□□□ -0.95
PTCH1-225ENST00000551845 LRRC36Q1X8D7 754 aa9.09□□□□□ -0.95
PTCH1-225ENST00000551845 ALKBH6Q3KRA9 238 aa9.09□□□□□ -0.95
PTCH1-225ENST00000551845 KRTAP27-1Q3LI81 207 aa9.09□□□□□ -0.95
PTCH1-225ENST00000551845 KCTD18Q6PI47 426 aaPredicted RBP9.09□□□□□ -0.95
PTCH1-225ENST00000551845 DRAM2Q6UX65 266 aa9.09□□□□□ -0.95
PTCH1-225ENST00000551845 COLCA1Q6ZS62 124 aa9.09□□□□□ -0.95
PTCH1-225ENST00000551845 RFPL4BQ6ZWI9 263 aa9.09□□□□□ -0.95
PTCH1-225ENST00000551845 SPATC1Q76KD6 591 aa9.09□□□□□ -0.95
PTCH1-225ENST00000551845 BCDIN3DQ7Z5W3 292 aaKnown RBP9.09□□□□□ -0.95
PTCH1-225ENST00000551845 KRTAP1-3Q8IUG1 177 aa9.09□□□□□ -0.95
PTCH1-225ENST00000551845 GID4Q8IVV7 300 aa9.09□□□□□ -0.95
PTCH1-225ENST00000551845 GALNT4Q8N4A0 578 aa9.09□□□□□ -0.95
PTCH1-225ENST00000551845 ZNF283Q8N7M2 679 aa9.09□□□□□ -0.95
PTCH1-225ENST00000551845 ZNF555Q8NEP9 628 aa9.09□□□□□ -0.95
PTCH1-225ENST00000551845 OR10S1Q8NGN2 331 aa9.09□□□□□ -0.95
PTCH1-225ENST00000551845 FAM81AQ8TBF8 368 aa9.09□□□□□ -0.95
PTCH1-225ENST00000551845 ST7LQ8TDW4 575 aa9.09□□□□□ -0.95
PTCH1-225ENST00000551845 RFKQ969G6 155 aa9.09□□□□□ -0.95
PTCH1-225ENST00000551845 ZNF799Q96GE5 643 aa9.09□□□□□ -0.95
PTCH1-225ENST00000551845 SORCS2Q96PQ0 1159 aa9.09□□□□□ -0.95
PTCH1-225ENST00000551845 C1QTNF5Q9BXJ0 243 aa9.09□□□□□ -0.95
PTCH1-225ENST00000551845 MYOZ1Q9NP98 299 aaPredicted RBP9.09□□□□□ -0.95
PTCH1-225ENST00000551845 HAO2Q9NYQ3 351 aa9.09□□□□□ -0.95
PTCH1-225ENST00000551845 MYEF2Q9P2K5 600 aaKnown RBP9.09□□□□□ -0.95
PTCH1-225ENST00000551845 WARS2Q9UGM6 360 aaKnown RBP9.09□□□□□ -0.95
PTCH1-225ENST00000551845 N6AMT1Q9Y5N5 214 aa9.09□□□□□ -0.95
PTCH1-225ENST00000551845 GMPPBQ9Y5P6 360 aa9.09□□□□□ -0.95
PTCH1-225ENST00000551845 RTTNQ86VV8 2226 aa9.09□□□□□ -0.95
PTCH1-225ENST00000551845 HEATR1Q9H583 2144 aaKnown RBP9.08□□□□□ -0.96
PTCH1-225ENST00000551845 LOC100130705A0A1B0GUX0 176 aa9.08□□□□□ -0.96
PTCH1-225ENST00000551845 SNTNA6NMZ2 147 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms