RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 Q9UFV3 132 aa7.07□□□□□ -1.28
DEPDC4-207ENST00000549249 SH3BGRL2Q9UJC5 107 aa7.07□□□□□ -1.28
DEPDC4-207ENST00000549249 STUB1Q9UNE7 303 aa7.07□□□□□ -1.28
DEPDC4-207ENST00000549249 PROCRQ9UNN8 238 aa7.07□□□□□ -1.28
DEPDC4-207ENST00000549249 BOD1L1Q8NFC6 3051 aa7.07□□□□□ -1.28
DEPDC4-207ENST00000549249 NAV2Q8IVL1 2488 aa7.06□□□□□ -1.28
DEPDC4-207ENST00000549249 TRBV2A0A0J9YWF9 115 aa7.06□□□□□ -1.28
DEPDC4-207ENST00000549249 LOC100506127A0A0U1RQW1 187 aa7.06□□□□□ -1.28
DEPDC4-207ENST00000549249 A0A1W2PPW3 197 aa7.06□□□□□ -1.28
DEPDC4-207ENST00000549249 C5orf63A6NC05 138 aa7.06□□□□□ -1.28
DEPDC4-207ENST00000549249 OR4C45A6NMZ5 311 aa7.06□□□□□ -1.28
DEPDC4-207ENST00000549249 GABRPO00591 440 aa7.06□□□□□ -1.28
DEPDC4-207ENST00000549249 SGCEO43556 437 aa7.06□□□□□ -1.28
DEPDC4-207ENST00000549249 SYNGR3O43761 229 aa7.06□□□□□ -1.28
DEPDC4-207ENST00000549249 AIREO43918 545 aa7.06□□□□□ -1.28
DEPDC4-207ENST00000549249 DOK2O60496 412 aa7.06□□□□□ -1.28
DEPDC4-207ENST00000549249 ZNF254O75437 659 aa7.06□□□□□ -1.28
DEPDC4-207ENST00000549249 SC5DO75845 299 aa7.06□□□□□ -1.28
DEPDC4-207ENST00000549249 LYZL6O75951 148 aa7.06□□□□□ -1.28
DEPDC4-207ENST00000549249 ZFPL1O95159 310 aa7.06□□□□□ -1.28
DEPDC4-207ENST00000549249 CNOT4O95628 575 aaKnown RBP7.06□□□□□ -1.28
DEPDC4-207ENST00000549249 CD1AP06126 327 aa7.06□□□□□ -1.28
DEPDC4-207ENST00000549249 TACSTD2P09758 323 aa7.06□□□□□ -1.28
DEPDC4-207ENST00000549249 H2BFMP0C1H6 154 aa7.06□□□□□ -1.28
DEPDC4-207ENST00000549249 CD8BP10966 210 aa7.06□□□□□ -1.28
DEPDC4-207ENST00000549249 CRYGSP22914 178 aa7.06□□□□□ -1.28
DEPDC4-207ENST00000549249 CTSSP25774 331 aa7.06□□□□□ -1.28
DEPDC4-207ENST00000549249 PCSK6P29122 969 aa7.06□□□□□ -1.28
DEPDC4-207ENST00000549249 OTX1P32242 354 aaPredicted RBP7.06□□□□□ -1.28
DEPDC4-207ENST00000549249 SH3BGRP55822 239 aaPredicted RBP7.06□□□□□ -1.28
DEPDC4-207ENST00000549249 RPS11P62280 158 aaKnown RBP eCLIP7.06□□□□□ -1.28
DEPDC4-207ENST00000549249 TUBA1BP68363 451 aa7.06□□□□□ -1.28
DEPDC4-207ENST00000549249 PSG4Q00888 419 aa7.06□□□□□ -1.28
DEPDC4-207ENST00000549249 HGFACQ04756 655 aa7.06□□□□□ -1.28
DEPDC4-207ENST00000549249 RBPJQ06330 500 aa7.06□□□□□ -1.28
DEPDC4-207ENST00000549249 PMPCAQ10713 525 aa7.06□□□□□ -1.28
DEPDC4-207ENST00000549249 SPCS2Q15005 226 aa7.06□□□□□ -1.28
DEPDC4-207ENST00000549249 RAB35Q15286 201 aa7.06□□□□□ -1.28
DEPDC4-207ENST00000549249 TSC22D1Q15714 1073 aa7.06□□□□□ -1.28
DEPDC4-207ENST00000549249 EIF2S3LQ2VIR3 472 aaKnown RBP7.06□□□□□ -1.28
DEPDC4-207ENST00000549249 KRTAP27-1Q3LI81 207 aa7.06□□□□□ -1.28
DEPDC4-207ENST00000549249 CCDC58Q4VC31 144 aa7.06□□□□□ -1.28
DEPDC4-207ENST00000549249 ELFN2Q5R3F8 820 aa7.06□□□□□ -1.28
DEPDC4-207ENST00000549249 SFRP5Q5T4F7 317 aa7.06□□□□□ -1.28
DEPDC4-207ENST00000549249 ZNF774Q6NX45 483 aa7.06□□□□□ -1.28
DEPDC4-207ENST00000549249 RPL22L1Q6P5R6 122 aaKnown RBP7.06□□□□□ -1.28
DEPDC4-207ENST00000549249 ZNF474Q6S9Z5 364 aaPredicted RBP7.06□□□□□ -1.28
DEPDC4-207ENST00000549249 TMEM91Q6ZNR0 172 aa7.06□□□□□ -1.28
DEPDC4-207ENST00000549249 TUBA1AQ71U36 451 aa7.06□□□□□ -1.28
DEPDC4-207ENST00000549249 RHOUQ7L0Q8 258 aa7.06□□□□□ -1.28
DEPDC4-207ENST00000549249 SLC16A14Q7RTX9 510 aa7.06□□□□□ -1.28
DEPDC4-207ENST00000549249 CATSPERDQ86XM0 798 aa7.06□□□□□ -1.28
DEPDC4-207ENST00000549249 RELL2Q8NC24 303 aaPredicted RBP7.06□□□□□ -1.28
DEPDC4-207ENST00000549249 GJC3Q8NFK1 279 aa7.06□□□□□ -1.28
DEPDC4-207ENST00000549249 OR10AC1Q8NH08 325 aa7.06□□□□□ -1.28
DEPDC4-207ENST00000549249 AKR7LQ8NHP1 331 aa7.06□□□□□ -1.28
DEPDC4-207ENST00000549249 SLC7A6Q92536 515 aa7.06□□□□□ -1.28
DEPDC4-207ENST00000549249 MYCBPQ99417 103 aaPredicted RBP7.06□□□□□ -1.28
DEPDC4-207ENST00000549249 ATF6BQ99941 703 aa7.06□□□□□ -1.28
DEPDC4-207ENST00000549249 BCL7BQ9BQE9 202 aa7.06□□□□□ -1.28
DEPDC4-207ENST00000549249 TMED9Q9BVK6 235 aa7.06□□□□□ -1.28
DEPDC4-207ENST00000549249 SFXN3Q9BWM7 321 aa7.06□□□□□ -1.28
DEPDC4-207ENST00000549249 MROQ9BYG7 248 aa7.06□□□□□ -1.28
DEPDC4-207ENST00000549249 OR2H1Q9GZK4 316 aa7.06□□□□□ -1.28
DEPDC4-207ENST00000549249 FAM206AQ9NX38 181 aa7.06□□□□□ -1.28
DEPDC4-207ENST00000549249 SLC22A13Q9Y226 551 aa7.06□□□□□ -1.28
DEPDC4-207ENST00000549249 SLC5A6Q9Y289 635 aa7.06□□□□□ -1.28
DEPDC4-207ENST00000549249 R4GMQ9 66 aa7.06□□□□□ -1.28
DEPDC4-207ENST00000549249 ESPL1Q14674 2120 aa7.06□□□□□ -1.28
DEPDC4-207ENST00000549249 TRDV1A0A1B0GX56 115 aa7.05□□□□□ -1.28
DEPDC4-207ENST00000549249 SHISA3A0PJX4 238 aa7.05□□□□□ -1.28
DEPDC4-207ENST00000549249 OR6C6A6NF89 314 aa7.05□□□□□ -1.28
DEPDC4-207ENST00000549249 E9PLN8 166 aa7.05□□□□□ -1.28
DEPDC4-207ENST00000549249 FAM229AH3BQW9 127 aa7.05□□□□□ -1.28
DEPDC4-207ENST00000549249 RAD51DO75771 328 aa7.05□□□□□ -1.28
DEPDC4-207ENST00000549249 RGS9O75916 674 aaPredicted RBP7.05□□□□□ -1.28
DEPDC4-207ENST00000549249 FARS2O95363 451 aaKnown RBP7.05□□□□□ -1.28
DEPDC4-207ENST00000549249 HLA-HP01893 362 aa7.05□□□□□ -1.28
DEPDC4-207ENST00000549249 DBHP09172 617 aa7.05□□□□□ -1.28
DEPDC4-207ENST00000549249 CD53P19397 219 aa7.05□□□□□ -1.28
DEPDC4-207ENST00000549249 DCTDP32321 178 aa7.05□□□□□ -1.28
DEPDC4-207ENST00000549249 CA7P43166 264 aa7.05□□□□□ -1.28
DEPDC4-207ENST00000549249 MAGEB1P43366 347 aa7.05□□□□□ -1.28
DEPDC4-207ENST00000549249 PRKXP51817 358 aa7.05□□□□□ -1.28
DEPDC4-207ENST00000549249 GRB2P62993 217 aaKnown RBP7.05□□□□□ -1.28
DEPDC4-207ENST00000549249 TLE1Q04724 770 aa7.05□□□□□ -1.28
DEPDC4-207ENST00000549249 SCRN3Q0VDG4 424 aa7.05□□□□□ -1.28
DEPDC4-207ENST00000549249 MRPL28Q13084 256 aaKnown RBP7.05□□□□□ -1.28
DEPDC4-207ENST00000549249 MRPL49Q13405 166 aaKnown RBP7.05□□□□□ -1.28
DEPDC4-207ENST00000549249 GABRA6Q16445 453 aa7.05□□□□□ -1.28
DEPDC4-207ENST00000549249 TBRG1Q3YBR2 411 aa7.05□□□□□ -1.28
DEPDC4-207ENST00000549249 HIKESHIQ53FT3 197 aa7.05□□□□□ -1.28
DEPDC4-207ENST00000549249 PABPC1L2AQ5JQF8 200 aa7.05□□□□□ -1.28
DEPDC4-207ENST00000549249 FAM27D1Q5T7N8 215 aa7.05□□□□□ -1.28
DEPDC4-207ENST00000549249 C22orf42Q6IC83 251 aa7.05□□□□□ -1.28
DEPDC4-207ENST00000549249 ANKRD16Q6P6B7 361 aa7.05□□□□□ -1.28
DEPDC4-207ENST00000549249 C20orf204Q6ZNR8 217 aa7.05□□□□□ -1.28
DEPDC4-207ENST00000549249 PRSS45Q7RTY3 260 aa7.05□□□□□ -1.28
DEPDC4-207ENST00000549249 NAA40Q86UY6 237 aa7.05□□□□□ -1.28
DEPDC4-207ENST00000549249 LIX1LQ8IVB5 337 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms