RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 TAF9Q16594 264 aa11.32□□□□□ -0.6
CDX2-202ENST00000548877 OR2T5Q6IEZ7 315 aa11.32□□□□□ -0.6
CDX2-202ENST00000548877 FIP1L1Q6UN15 594 aaKnown RBP11.32□□□□□ -0.6
CDX2-202ENST00000548877 LRRC18Q8N456 261 aa11.32□□□□□ -0.6
CDX2-202ENST00000548877 OR10S1Q8NGN2 331 aa11.32□□□□□ -0.6
CDX2-202ENST00000548877 OR2T29Q8NH02 315 aa11.32□□□□□ -0.6
CDX2-202ENST00000548877 HSH2DQ96JZ2 352 aa11.32□□□□□ -0.6
CDX2-202ENST00000548877 SSBP3Q9BWW4 388 aaPredicted RBP11.32□□□□□ -0.6
CDX2-202ENST00000548877 CCNB1IP1Q9NPC3 277 aa11.32□□□□□ -0.6
CDX2-202ENST00000548877 MAN2C1Q9NTJ4 1040 aa11.32□□□□□ -0.6
CDX2-202ENST00000548877 SMPD3Q9NY59 655 aaPredicted RBP11.32□□□□□ -0.6
CDX2-202ENST00000548877 USE1Q9NZ43 259 aa11.32□□□□□ -0.6
CDX2-202ENST00000548877 H0YAE9 185 aa11.31□□□□□ -0.6
CDX2-202ENST00000548877 SOCS2O14508 198 aa11.31□□□□□ -0.6
CDX2-202ENST00000548877 TRMUO75648 421 aaKnown RBP11.31□□□□□ -0.6
CDX2-202ENST00000548877 ALX3O95076 343 aa11.31□□□□□ -0.6
CDX2-202ENST00000548877 CH25HO95992 272 aa11.31□□□□□ -0.6
CDX2-202ENST00000548877 SEMG1P04279 462 aa11.31□□□□□ -0.6
CDX2-202ENST00000548877 KITLGP21583 273 aa11.31□□□□□ -0.6
CDX2-202ENST00000548877 TNFSF4P23510 183 aa11.31□□□□□ -0.6
CDX2-202ENST00000548877 RAD23AP54725 363 aa11.31□□□□□ -0.6
CDX2-202ENST00000548877 PROK1P58294 105 aa11.31□□□□□ -0.6
CDX2-202ENST00000548877 FAM27BQ5VT28 67 aa11.31□□□□□ -0.6
CDX2-202ENST00000548877 HDDC2Q7Z4H3 204 aa11.31□□□□□ -0.6
CDX2-202ENST00000548877 DHRSXQ8N5I4 330 aa11.31□□□□□ -0.6
CDX2-202ENST00000548877 FAM86B1Q8N7N1 296 aa11.31□□□□□ -0.6
CDX2-202ENST00000548877 AKR7LQ8NHP1 331 aa11.31□□□□□ -0.6
CDX2-202ENST00000548877 VANGL1Q8TAA9 524 aaPredicted RBP11.31□□□□□ -0.6
CDX2-202ENST00000548877 ABHD4Q8TB40 342 aa11.31□□□□□ -0.6
CDX2-202ENST00000548877 ASB10Q8WXI3 467 aa11.31□□□□□ -0.6
CDX2-202ENST00000548877 UBE2FQ969M7 185 aa11.31□□□□□ -0.6
CDX2-202ENST00000548877 ZDHHC16Q969W1 377 aa11.31□□□□□ -0.6
CDX2-202ENST00000548877 TPD52L3Q96J77 140 aa11.31□□□□□ -0.6
CDX2-202ENST00000548877 FAM71F1Q96KD3 344 aaPredicted RBP11.31□□□□□ -0.6
CDX2-202ENST00000548877 MCHR1Q99705 422 aa11.31□□□□□ -0.6
CDX2-202ENST00000548877 CHIAQ9BZP6 476 aa11.31□□□□□ -0.6
CDX2-202ENST00000548877 REEP1Q9H902 201 aa11.31□□□□□ -0.6
CDX2-202ENST00000548877 ELOVL3Q9HB03 270 aa11.31□□□□□ -0.6
CDX2-202ENST00000548877 PPP1R3CQ9UQK1 317 aa11.31□□□□□ -0.6
CDX2-202ENST00000548877 FAM32AQ9Y421 112 aaKnown RBP11.31□□□□□ -0.6
CDX2-202ENST00000548877 NPIPB13A6NJU9 1138 aa11.3□□□□□ -0.6
CDX2-202ENST00000548877 NPIPB4C9JG80 1138 aa11.3□□□□□ -0.6
CDX2-202ENST00000548877 M0QX08 132 aa11.3□□□□□ -0.6
CDX2-202ENST00000548877 EI24O14681 340 aa11.3□□□□□ -0.6
CDX2-202ENST00000548877 TNFAIP8O95379 198 aa11.3□□□□□ -0.6
CDX2-202ENST00000548877 MT-ND1P03886 318 aa11.3□□□□□ -0.6
CDX2-202ENST00000548877 THY1P04216 161 aa11.3□□□□□ -0.6
CDX2-202ENST00000548877 TSPAN19P0C672 248 aa11.3□□□□□ -0.6
CDX2-202ENST00000548877 RPS6KA3P51812 740 aa11.3□□□□□ -0.6
CDX2-202ENST00000548877 UGT2B15P54855 530 aa11.3□□□□□ -0.6
CDX2-202ENST00000548877 BLMHQ13867 455 aa11.3□□□□□ -0.6
CDX2-202ENST00000548877 ARMC4Q5T2S8 1044 aa11.3□□□□□ -0.6
CDX2-202ENST00000548877 TTC33Q6PID6 262 aaPredicted RBP11.3□□□□□ -0.6
CDX2-202ENST00000548877 Q6ZR03 302 aa11.3□□□□□ -0.6
CDX2-202ENST00000548877 KLBQ86Z14 1044 aa11.3□□□□□ -0.6
CDX2-202ENST00000548877 LINC01006Q8NI28 216 aa11.3□□□□□ -0.6
CDX2-202ENST00000548877 MPP4Q96JB8 637 aa11.3□□□□□ -0.6
CDX2-202ENST00000548877 C4orf45Q96LM5 186 aa11.3□□□□□ -0.6
CDX2-202ENST00000548877 SLC29A1Q99808 456 aa11.3□□□□□ -0.6
CDX2-202ENST00000548877 SLC30A2Q9BRI3 323 aa11.3□□□□□ -0.6
CDX2-202ENST00000548877 ANKRD60Q9BZ19 345 aa11.3□□□□□ -0.6
CDX2-202ENST00000548877 OR2H1Q9GZK4 316 aa11.3□□□□□ -0.6
CDX2-202ENST00000548877 GABARAPL1Q9H0R8 117 aa11.3□□□□□ -0.6
CDX2-202ENST00000548877 WNT5BQ9H1J7 359 aa11.3□□□□□ -0.6
CDX2-202ENST00000548877 TMEM165Q9HC07 324 aa11.3□□□□□ -0.6
CDX2-202ENST00000548877 TBCCD1Q9NVR7 557 aa11.3□□□□□ -0.6
CDX2-202ENST00000548877 MIOXQ9UGB7 285 aa11.3□□□□□ -0.6
CDX2-202ENST00000548877 SLC13A4Q9UKG4 626 aa11.3□□□□□ -0.6
CDX2-202ENST00000548877 RNF114Q9Y508 228 aa11.3□□□□□ -0.6
CDX2-202ENST00000548877 TNFRSF13BO14836 293 aaPredicted RBP11.29□□□□□ -0.6
CDX2-202ENST00000548877 SURF4O15260 269 aa11.29□□□□□ -0.6
CDX2-202ENST00000548877 TIMM8AO60220 97 aaPredicted RBP11.29□□□□□ -0.6
CDX2-202ENST00000548877 TSPAN15O95858 294 aa11.29□□□□□ -0.6
CDX2-202ENST00000548877 HIST1H2ABP04908 130 aa11.29□□□□□ -0.6
CDX2-202ENST00000548877 ALPLP05186 524 aa11.29□□□□□ -0.6
CDX2-202ENST00000548877 MELTFP08582 738 aa11.29□□□□□ -0.6
CDX2-202ENST00000548877 CST2P09228 141 aa11.29□□□□□ -0.6
CDX2-202ENST00000548877 THRBP10828 461 aa11.29□□□□□ -0.6
CDX2-202ENST00000548877 AQP1P29972 269 aa11.29□□□□□ -0.6
CDX2-202ENST00000548877 CDAP32320 146 aa11.29□□□□□ -0.6
CDX2-202ENST00000548877 RBMXP38159 391 aaKnown RBP11.29□□□□□ -0.6
CDX2-202ENST00000548877 CAPGP40121 348 aa11.29□□□□□ -0.6
CDX2-202ENST00000548877 SMIM11AP58511 58 aa11.29□□□□□ -0.6
CDX2-202ENST00000548877 NPTX1Q15818 432 aa11.29□□□□□ -0.6
CDX2-202ENST00000548877 KPRPQ5T749 579 aaPredicted RBP11.29□□□□□ -0.6
CDX2-202ENST00000548877 TTC23Q5W5X9 447 aa11.29□□□□□ -0.6
CDX2-202ENST00000548877 BRD3OSQ6XYD6 125 aa11.29□□□□□ -0.6
CDX2-202ENST00000548877 ZNF620Q6ZNG0 422 aa11.29□□□□□ -0.6
CDX2-202ENST00000548877 FOXL2NBQ6ZUU3 175 aa11.29□□□□□ -0.6
CDX2-202ENST00000548877 HIST3H2AQ7L7L0 130 aa11.29□□□□□ -0.6
CDX2-202ENST00000548877 CYP4Z1Q86W10 505 aa11.29□□□□□ -0.6
CDX2-202ENST00000548877 ALDH16A1Q8IZ83 802 aa11.29□□□□□ -0.6
CDX2-202ENST00000548877 NPEPL1Q8NDH3 523 aa11.29□□□□□ -0.6
CDX2-202ENST00000548877 OR2Z1Q8NG97 314 aa11.29□□□□□ -0.6
CDX2-202ENST00000548877 ITLN1Q8WWA0 313 aa11.29□□□□□ -0.6
CDX2-202ENST00000548877 DYRK2Q92630 601 aa11.29□□□□□ -0.6
CDX2-202ENST00000548877 TFAP2CQ92754 450 aa11.29□□□□□ -0.6
CDX2-202ENST00000548877 HIST1H2ACQ93077 130 aa11.29□□□□□ -0.6
CDX2-202ENST00000548877 TAMM41Q96BW9 452 aa11.29□□□□□ -0.6
CDX2-202ENST00000548877 PLEKHA8Q96JA3 519 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms