RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 OR13G1Q8NGZ3 307 aa11.21□□□□□ -0.61
CPSF6-204ENST00000547486 ZNRF4Q8WWF5 429 aa11.21□□□□□ -0.61
CPSF6-204ENST00000547486 MEGF10Q96KG7 1140 aa11.21□□□□□ -0.61
CPSF6-204ENST00000547486 ZNF582Q96NG8 517 aaPredicted RBP11.21□□□□□ -0.61
CPSF6-204ENST00000547486 DDOQ99489 341 aa11.21□□□□□ -0.61
CPSF6-204ENST00000547486 SLC30A2Q9BRI3 323 aa11.21□□□□□ -0.61
CPSF6-204ENST00000547486 HDHD2Q9H0R4 259 aa11.21□□□□□ -0.61
CPSF6-204ENST00000547486 TMEM165Q9HC07 324 aa11.21□□□□□ -0.61
CPSF6-204ENST00000547486 IL1RAPQ9NPH3 570 aa11.21□□□□□ -0.61
CPSF6-204ENST00000547486 PNRC2Q9NPJ4 139 aaKnown RBP11.21□□□□□ -0.61
CPSF6-204ENST00000547486 MAGEL2Q9UJ55 1249 aa11.21□□□□□ -0.61
CPSF6-204ENST00000547486 POLR3KQ9Y2Y1 108 aaPredicted RBP11.21□□□□□ -0.61
CPSF6-204ENST00000547486 NBEAL1Q6ZS30 2694 aa11.21□□□□□ -0.62
CPSF6-204ENST00000547486 TMEM89A2RUT3 159 aa11.2□□□□□ -0.62
CPSF6-204ENST00000547486 IQCF6A8MYZ5 107 aa11.2□□□□□ -0.62
CPSF6-204ENST00000547486 F5H5P2 479 aa11.2□□□□□ -0.62
CPSF6-204ENST00000547486 SURF4O15260 269 aa11.2□□□□□ -0.62
CPSF6-204ENST00000547486 ATP8B1O43520 1251 aa11.2□□□□□ -0.62
CPSF6-204ENST00000547486 CYB5R3P00387 301 aaPredicted RBP11.2□□□□□ -0.62
CPSF6-204ENST00000547486 RENP00797 406 aa11.2□□□□□ -0.62
CPSF6-204ENST00000547486 HLA-DPB1P04440 258 aa11.2□□□□□ -0.62
CPSF6-204ENST00000547486 FABP3P05413 133 aa11.2□□□□□ -0.62
CPSF6-204ENST00000547486 WNT2P09544 360 aa11.2□□□□□ -0.62
CPSF6-204ENST00000547486 ACSM4P0C7M7 580 aa11.2□□□□□ -0.62
CPSF6-204ENST00000547486 SELEP16581 610 aa11.2□□□□□ -0.62
CPSF6-204ENST00000547486 ANOS1P23352 680 aa11.2□□□□□ -0.62
CPSF6-204ENST00000547486 COMPP49747 757 aaPredicted RBP11.2□□□□□ -0.62
CPSF6-204ENST00000547486 ZNF154Q13106 437 aa11.2□□□□□ -0.62
CPSF6-204ENST00000547486 TUSC1Q2TAM9 212 aa11.2□□□□□ -0.62
CPSF6-204ENST00000547486 SAMD4BQ5PRF9 694 aaKnown RBP11.2□□□□□ -0.62
CPSF6-204ENST00000547486 ZNF362Q5T0B9 420 aaPredicted RBP11.2□□□□□ -0.62
CPSF6-204ENST00000547486 PGBD2Q6P3X8 592 aa11.2□□□□□ -0.62
CPSF6-204ENST00000547486 PGM2L1Q6PCE3 622 aa11.2□□□□□ -0.62
CPSF6-204ENST00000547486 DNM1P34Q6PK57 102 aa11.2□□□□□ -0.62
CPSF6-204ENST00000547486 BHLHE23Q8NDY6 225 aa11.2□□□□□ -0.62
CPSF6-204ENST00000547486 SDR9C7Q8NEX9 313 aa11.2□□□□□ -0.62
CPSF6-204ENST00000547486 OR52E2Q8NGJ4 325 aa11.2□□□□□ -0.62
CPSF6-204ENST00000547486 GNPDA2Q8TDQ7 276 aa11.2□□□□□ -0.62
CPSF6-204ENST00000547486 NSMCE2Q96MF7 247 aa11.2□□□□□ -0.62
CPSF6-204ENST00000547486 SUCNR1Q9BXA5 334 aa11.2□□□□□ -0.62
CPSF6-204ENST00000547486 C1QTNF5Q9BXJ0 243 aa11.2□□□□□ -0.62
CPSF6-204ENST00000547486 EGLN3Q9H6Z9 239 aa11.2□□□□□ -0.62
CPSF6-204ENST00000547486 MRPL22Q9NWU5 206 aaKnown RBP11.2□□□□□ -0.62
CPSF6-204ENST00000547486 CYB5R1Q9UHQ9 305 aa11.2□□□□□ -0.62
CPSF6-204ENST00000547486 TAGLN3Q9UI15 199 aa11.2□□□□□ -0.62
CPSF6-204ENST00000547486 INSIG2Q9Y5U4 225 aa11.2□□□□□ -0.62
CPSF6-204ENST00000547486 DYSFO75923 2080 aa11.2□□□□□ -0.62
CPSF6-204ENST00000547486 TENM1Q9UKZ4 2725 aa11.19□□□□□ -0.62
CPSF6-204ENST00000547486 A0A1B0GWJ7 208 aa11.19□□□□□ -0.62
CPSF6-204ENST00000547486 CEACAM18A8MTB9 384 aa11.19□□□□□ -0.62
CPSF6-204ENST00000547486 F5H5K5 113 aa11.19□□□□□ -0.62
CPSF6-204ENST00000547486 TRIM77I1YAP6 450 aa11.19□□□□□ -0.62
CPSF6-204ENST00000547486 IDH3BO43837 385 aa11.19□□□□□ -0.62
CPSF6-204ENST00000547486 PSKH1P11801 424 aa11.19□□□□□ -0.62
CPSF6-204ENST00000547486 ZNF12P17014 697 aa11.19□□□□□ -0.62
CPSF6-204ENST00000547486 NOS3P29474 1203 aa11.19□□□□□ -0.62
CPSF6-204ENST00000547486 MDH2P40926 338 aaKnown RBP11.19□□□□□ -0.62
CPSF6-204ENST00000547486 RPS27P42677 84 aaKnown RBP11.19□□□□□ -0.62
CPSF6-204ENST00000547486 HMGA2P52926 109 aa11.19□□□□□ -0.62
CPSF6-204ENST00000547486 ACTG1P63261 375 aa11.19□□□□□ -0.62
CPSF6-204ENST00000547486 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.19□□□□□ -0.62
CPSF6-204ENST00000547486 TSPAN31Q12999 210 aa11.19□□□□□ -0.62
CPSF6-204ENST00000547486 GK2Q14410 553 aaPredicted RBP11.19□□□□□ -0.62
CPSF6-204ENST00000547486 FAM201AQ5SY85 155 aa11.19□□□□□ -0.62
CPSF6-204ENST00000547486 SLC27A4Q6P1M0 643 aa11.19□□□□□ -0.62
CPSF6-204ENST00000547486 ZNF620Q6ZNG0 422 aa11.19□□□□□ -0.62
CPSF6-204ENST00000547486 PIGWQ7Z7B1 504 aa11.19□□□□□ -0.62
CPSF6-204ENST00000547486 MOGAT3Q86VF5 341 aa11.19□□□□□ -0.62
CPSF6-204ENST00000547486 ZDHHC21Q8IVQ6 265 aa11.19□□□□□ -0.62
CPSF6-204ENST00000547486 DEFB107AQ8IZN7 70 aa11.19□□□□□ -0.62
CPSF6-204ENST00000547486 BCL6BQ8N143 479 aaPredicted RBP11.19□□□□□ -0.62
CPSF6-204ENST00000547486 BPIFB2Q8N4F0 458 aa11.19□□□□□ -0.62
CPSF6-204ENST00000547486 OR10S1Q8NGN2 331 aa11.19□□□□□ -0.62
CPSF6-204ENST00000547486 GCDHQ92947 438 aaPredicted RBP11.19□□□□□ -0.62
CPSF6-204ENST00000547486 MCUR1Q96AQ8 359 aa11.19□□□□□ -0.62
CPSF6-204ENST00000547486 MAP6Q96JE9 813 aa11.19□□□□□ -0.62
CPSF6-204ENST00000547486 PITX2Q99697 317 aa11.19□□□□□ -0.62
CPSF6-204ENST00000547486 CDADC1Q9BWV3 514 aa11.19□□□□□ -0.62
CPSF6-204ENST00000547486 TMEM100Q9NV29 134 aa11.19□□□□□ -0.62
CPSF6-204ENST00000547486 ZNF69Q9UC07 566 aa11.19□□□□□ -0.62
CPSF6-204ENST00000547486 TMCC3Q9ULS5 477 aa11.19□□□□□ -0.62
CPSF6-204ENST00000547486 AUP1Q9Y679 476 aa11.19□□□□□ -0.62
CPSF6-204ENST00000547486 TANC2Q9HCD6 1990 aa11.18□□□□□ -0.62
CPSF6-204ENST00000547486 C5orf63A6NC05 138 aa11.18□□□□□ -0.62
CPSF6-204ENST00000547486 A8MXK9 166 aa11.18□□□□□ -0.62
CPSF6-204ENST00000547486 GASTP01350 101 aa11.18□□□□□ -0.62
CPSF6-204ENST00000547486 HLA-DQA2P01906 255 aa11.18□□□□□ -0.62
CPSF6-204ENST00000547486 FPR2P25090 351 aa11.18□□□□□ -0.62
CPSF6-204ENST00000547486 PYCR1P32322 319 aa11.18□□□□□ -0.62
CPSF6-204ENST00000547486 CD80P33681 288 aa11.18□□□□□ -0.62
CPSF6-204ENST00000547486 IFNGR2P38484 337 aa11.18□□□□□ -0.62
CPSF6-204ENST00000547486 SRP9P49458 86 aaKnown RBP11.18□□□□□ -0.62
CPSF6-204ENST00000547486 PAX2Q02962 417 aa11.18□□□□□ -0.62
CPSF6-204ENST00000547486 PAX8Q06710 450 aa11.18□□□□□ -0.62
CPSF6-204ENST00000547486 TRAP1Q12931 704 aaKnown RBP11.18□□□□□ -0.62
CPSF6-204ENST00000547486 MAB21L1Q13394 359 aa11.18□□□□□ -0.62
CPSF6-204ENST00000547486 CLEC12AQ5QGZ9 265 aa11.18□□□□□ -0.62
CPSF6-204ENST00000547486 ZNF770Q6IQ21 691 aaPredicted RBP11.18□□□□□ -0.62
CPSF6-204ENST00000547486 SIGLECL1Q8N7X8 197 aa11.18□□□□□ -0.62
CPSF6-204ENST00000547486 CYB561A3Q8NBI2 242 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms