RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 CPEB3Q8NE35 698 aaKnown RBP13.78□□□□□ -0.2
TRAFD1-203ENST00000547063 ZNF799Q96GE5 643 aa13.78□□□□□ -0.2
TRAFD1-203ENST00000547063 DOK1Q99704 481 aa13.78□□□□□ -0.2
TRAFD1-203ENST00000547063 TRBV2A0A0J9YWF9 115 aa13.77□□□□□ -0.21
TRAFD1-203ENST00000547063 A0A1W2PR80 420 aa13.77□□□□□ -0.21
TRAFD1-203ENST00000547063 CCRL2O00421 344 aa13.77□□□□□ -0.21
TRAFD1-203ENST00000547063 OGG1O15527 345 aa13.77□□□□□ -0.21
TRAFD1-203ENST00000547063 CPEP16870 476 aa13.77□□□□□ -0.21
TRAFD1-203ENST00000547063 CELP19835 753 aa13.77□□□□□ -0.21
TRAFD1-203ENST00000547063 CCKARP32238 428 aa13.77□□□□□ -0.21
TRAFD1-203ENST00000547063 SLC6A9P48067 706 aa13.77□□□□□ -0.21
TRAFD1-203ENST00000547063 IDH3GP51553 393 aaPredicted RBP13.77□□□□□ -0.21
TRAFD1-203ENST00000547063 ALKBH1Q13686 389 aaKnown RBP13.77□□□□□ -0.21
TRAFD1-203ENST00000547063 CDK5R1Q15078 307 aa13.77□□□□□ -0.21
TRAFD1-203ENST00000547063 KRTAP27-1Q3LI81 207 aa13.77□□□□□ -0.21
TRAFD1-203ENST00000547063 UNQ6126/PRO20091Q6UXV3 157 aa13.77□□□□□ -0.21
TRAFD1-203ENST00000547063 SLC30A7Q8NEW0 376 aa13.77□□□□□ -0.21
TRAFD1-203ENST00000547063 OR52H1Q8NGJ2 320 aa13.77□□□□□ -0.21
TRAFD1-203ENST00000547063 OR2G2Q8NGZ5 317 aa13.77□□□□□ -0.21
TRAFD1-203ENST00000547063 SMIM19Q96E16 107 aa13.77□□□□□ -0.21
TRAFD1-203ENST00000547063 POM121L2Q96KW2 1035 aa13.77□□□□□ -0.21
TRAFD1-203ENST00000547063 ZNF75AQ96N20 296 aa13.77□□□□□ -0.21
TRAFD1-203ENST00000547063 OPALINQ96PE5 141 aa13.77□□□□□ -0.21
TRAFD1-203ENST00000547063 MED18Q9BUE0 208 aa13.77□□□□□ -0.21
TRAFD1-203ENST00000547063 COMMD4Q9H0A8 199 aa13.77□□□□□ -0.21
TRAFD1-203ENST00000547063 CDH20Q9HBT6 801 aa13.77□□□□□ -0.21
TRAFD1-203ENST00000547063 NOX3Q9HBY0 568 aa13.77□□□□□ -0.21
TRAFD1-203ENST00000547063 C5orf49A4QMS7 147 aa13.76□□□□□ -0.21
TRAFD1-203ENST00000547063 TMEM212A6NML5 194 aa13.76□□□□□ -0.21
TRAFD1-203ENST00000547063 J3QW42 95 aa13.76□□□□□ -0.21
TRAFD1-203ENST00000547063 PLPP2O43688 288 aa13.76□□□□□ -0.21
TRAFD1-203ENST00000547063 GPRIN2O60269 458 aa13.76□□□□□ -0.21
TRAFD1-203ENST00000547063 SRSF10O75494 262 aaKnown RBP13.76□□□□□ -0.21
TRAFD1-203ENST00000547063 IGLV1-44P01699 117 aa13.76□□□□□ -0.21
TRAFD1-203ENST00000547063 ACSM4P0C7M7 580 aa13.76□□□□□ -0.21
TRAFD1-203ENST00000547063 PSMA1P25786 263 aaKnown RBP13.76□□□□□ -0.21
TRAFD1-203ENST00000547063 PSMB10P40306 273 aa13.76□□□□□ -0.21
TRAFD1-203ENST00000547063 GP2P55259 537 aaKnown RBP13.76□□□□□ -0.21
TRAFD1-203ENST00000547063 ZNF121P58317 390 aaPredicted RBP13.76□□□□□ -0.21
TRAFD1-203ENST00000547063 TRAM1Q15629 374 aa13.76□□□□□ -0.21
TRAFD1-203ENST00000547063 TSTQ16762 297 aaKnown RBP13.76□□□□□ -0.21
TRAFD1-203ENST00000547063 BCL2L15Q5TBC7 163 aa13.76□□□□□ -0.21
TRAFD1-203ENST00000547063 DMKNQ6E0U4 476 aaPredicted RBP13.76□□□□□ -0.21
TRAFD1-203ENST00000547063 ZNF704Q6ZNC4 412 aaPredicted RBP13.76□□□□□ -0.21
TRAFD1-203ENST00000547063 CATSPERDQ86XM0 798 aa13.76□□□□□ -0.21
TRAFD1-203ENST00000547063 OR13F1Q8NGS4 319 aa13.76□□□□□ -0.21
TRAFD1-203ENST00000547063 FAM206AQ9NX38 181 aa13.76□□□□□ -0.21
TRAFD1-203ENST00000547063 EIF3KQ9UBQ5 218 aaKnown RBP13.76□□□□□ -0.21
TRAFD1-203ENST00000547063 NUFIP1Q9UHK0 495 aaKnown RBP13.76□□□□□ -0.21
TRAFD1-203ENST00000547063 ZNF391Q9UJN7 358 aa13.76□□□□□ -0.21
TRAFD1-203ENST00000547063 OR52A1Q9UKL2 312 aa13.76□□□□□ -0.21
TRAFD1-203ENST00000547063 GTF2A1LQ9UNN4 478 aa13.76□□□□□ -0.21
TRAFD1-203ENST00000547063 ZNF462Q96JM2 2506 aa13.75□□□□□ -0.21
TRAFD1-203ENST00000547063 E9PI62 339 aa13.75□□□□□ -0.21
TRAFD1-203ENST00000547063 AGFG2O95081 481 aa13.75□□□□□ -0.21
TRAFD1-203ENST00000547063 LALBAP00709 142 aa13.75□□□□□ -0.21
TRAFD1-203ENST00000547063 ANXA2P07355 339 aaKnown RBP13.75□□□□□ -0.21
TRAFD1-203ENST00000547063 GTF2A1P52655 376 aaPredicted RBP13.75□□□□□ -0.21
TRAFD1-203ENST00000547063 RSPO1Q2MKA7 263 aaPredicted RBP13.75□□□□□ -0.21
TRAFD1-203ENST00000547063 TIMM50Q3ZCQ8 353 aa13.75□□□□□ -0.21
TRAFD1-203ENST00000547063 LIPKQ5VXJ0 399 aa13.75□□□□□ -0.21
TRAFD1-203ENST00000547063 ZNF584Q8IVC4 421 aa13.75□□□□□ -0.21
TRAFD1-203ENST00000547063 PHC2Q8IXK0 858 aa13.75□□□□□ -0.21
TRAFD1-203ENST00000547063 C1orf174Q8IYL3 243 aa13.75□□□□□ -0.21
TRAFD1-203ENST00000547063 MS4A15Q8N5U1 240 aa13.75□□□□□ -0.21
TRAFD1-203ENST00000547063 OR5AK2Q8NH90 309 aa13.75□□□□□ -0.21
TRAFD1-203ENST00000547063 RPS4Y2Q8TD47 263 aa13.75□□□□□ -0.21
TRAFD1-203ENST00000547063 THRSPQ92748 146 aa13.75□□□□□ -0.21
TRAFD1-203ENST00000547063 APOBEC3DQ96AK3 386 aaPredicted RBP13.75□□□□□ -0.21
TRAFD1-203ENST00000547063 C4orf45Q96LM5 186 aa13.75□□□□□ -0.21
TRAFD1-203ENST00000547063 KCNS3Q9BQ31 491 aa13.75□□□□□ -0.21
TRAFD1-203ENST00000547063 OR10A2Q9H208 303 aa13.75□□□□□ -0.21
TRAFD1-203ENST00000547063 NDUFB11Q9NX14 153 aa13.75□□□□□ -0.21
TRAFD1-203ENST00000547063 FRRS1LQ9P0K9 344 aa13.75□□□□□ -0.21
TRAFD1-203ENST00000547063 ST6GALNAC2Q9UJ37 374 aa13.75□□□□□ -0.21
TRAFD1-203ENST00000547063 GRIP1Q9Y3R0 1128 aa13.75□□□□□ -0.21
TRAFD1-203ENST00000547063 SPENQ96T58 3664 aaKnown RBP13.75□□□□□ -0.21
TRAFD1-203ENST00000547063 LOC100509620A0A075B734 347 aa13.74□□□□□ -0.21
TRAFD1-203ENST00000547063 PNPP00491 289 aa13.74□□□□□ -0.21
TRAFD1-203ENST00000547063 SERPINA3P01011 423 aa13.74□□□□□ -0.21
TRAFD1-203ENST00000547063 LCATP04180 440 aa13.74□□□□□ -0.21
TRAFD1-203ENST00000547063 DBHP09172 617 aa13.74□□□□□ -0.21
TRAFD1-203ENST00000547063 UBCP0CG48 685 aaKnown RBP13.74□□□□□ -0.21
TRAFD1-203ENST00000547063 CCNOP22674 350 aa13.74□□□□□ -0.21
TRAFD1-203ENST00000547063 GABRA5P31644 462 aa13.74□□□□□ -0.21
TRAFD1-203ENST00000547063 TFF3Q07654 80 aa13.74□□□□□ -0.21
TRAFD1-203ENST00000547063 MFGE8Q08431 387 aaPredicted RBP13.74□□□□□ -0.21
TRAFD1-203ENST00000547063 WDR38Q5JTN6 314 aa13.74□□□□□ -0.21
TRAFD1-203ENST00000547063 TMEM244Q5VVB8 128 aa13.74□□□□□ -0.21
TRAFD1-203ENST00000547063 TMEM108Q6UXF1 575 aa13.74□□□□□ -0.21
TRAFD1-203ENST00000547063 ELMOD2Q8IZ81 293 aa13.74□□□□□ -0.21
TRAFD1-203ENST00000547063 ZNF676Q8N7Q3 588 aa13.74□□□□□ -0.21
TRAFD1-203ENST00000547063 OR5L1Q8NGL2 311 aa13.74□□□□□ -0.21
TRAFD1-203ENST00000547063 SLC7A6Q92536 515 aa13.74□□□□□ -0.21
TRAFD1-203ENST00000547063 ITFG2Q969R8 447 aa13.74□□□□□ -0.21
TRAFD1-203ENST00000547063 MS4A3Q96HJ5 214 aa13.74□□□□□ -0.21
TRAFD1-203ENST00000547063 PGAM5Q96HS1 289 aa13.74□□□□□ -0.21
TRAFD1-203ENST00000547063 C1QTNF6Q9BXI9 259 aa13.74□□□□□ -0.21
TRAFD1-203ENST00000547063 C1QTNF5Q9BXJ0 243 aa13.74□□□□□ -0.21
TRAFD1-203ENST00000547063 PBOV1Q9GZY1 135 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms