RNA–Protein interactions for RNA: ENST00000546588.1

VPS29-203, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-203ENST00000546588 ARHGEF9O43307 516 aa7.43□□□□□ -1.22
VPS29-203ENST00000546588 PLPP2O43688 288 aa7.43□□□□□ -1.22
VPS29-203ENST00000546588 SSX5O60225 188 aa7.43□□□□□ -1.22
VPS29-203ENST00000546588 DOK2O60496 412 aa7.43□□□□□ -1.22
VPS29-203ENST00000546588 SC5DO75845 299 aa7.43□□□□□ -1.22
VPS29-203ENST00000546588 SULT1C4O75897 302 aa7.43□□□□□ -1.22
VPS29-203ENST00000546588 ABHD16AO95870 558 aa7.43□□□□□ -1.22
VPS29-203ENST00000546588 OPN1LWP04000 364 aa7.43□□□□□ -1.22
VPS29-203ENST00000546588 ZNF43P17038 809 aa7.43□□□□□ -1.22
VPS29-203ENST00000546588 MALP21145 153 aa7.43□□□□□ -1.22
VPS29-203ENST00000546588 AHCYP23526 432 aa7.43□□□□□ -1.22
VPS29-203ENST00000546588 PTBP1P26599 531 aaKnown RBP eCLIP7.43□□□□□ -1.22
VPS29-203ENST00000546588 LIPAP38571 399 aa7.43□□□□□ -1.22
VPS29-203ENST00000546588 MAP2K4P45985 399 aa7.43□□□□□ -1.22
VPS29-203ENST00000546588 RGS6P49758 472 aa7.43□□□□□ -1.22
VPS29-203ENST00000546588 TAS2R43P59537 309 aa7.43□□□□□ -1.22
VPS29-203ENST00000546588 RPS3AP61247 264 aaKnown RBP7.43□□□□□ -1.22
VPS29-203ENST00000546588 GLO1Q04760 184 aa7.43□□□□□ -1.22
VPS29-203ENST00000546588 C1DQ13901 141 aaKnown RBP7.43□□□□□ -1.22
VPS29-203ENST00000546588 HABP2Q14520 560 aaPredicted RBP7.43□□□□□ -1.22
VPS29-203ENST00000546588 RNPS1Q15287 305 aaKnown RBP7.43□□□□□ -1.22
VPS29-203ENST00000546588 SSX1Q16384 188 aa7.43□□□□□ -1.22
VPS29-203ENST00000546588 TIGD6Q17RP2 521 aa7.43□□□□□ -1.22
VPS29-203ENST00000546588 MST1LQ2TV78 715 aa7.43□□□□□ -1.22
VPS29-203ENST00000546588 CCDC58Q4VC31 144 aa7.43□□□□□ -1.22
VPS29-203ENST00000546588 KLHL24Q6TFL4 600 aa7.43□□□□□ -1.22
VPS29-203ENST00000546588 ZNF322Q6U7Q0 402 aaPredicted RBP7.43□□□□□ -1.22
VPS29-203ENST00000546588 GDPGP1Q6ZNW5 385 aa7.43□□□□□ -1.22
VPS29-203ENST00000546588 KCTD20Q7Z5Y7 419 aa7.43□□□□□ -1.22
VPS29-203ENST00000546588 KLHL36Q8N4N3 616 aa7.43□□□□□ -1.22
VPS29-203ENST00000546588 OR51G2Q8NGK0 314 aa7.43□□□□□ -1.22
VPS29-203ENST00000546588 OR9Q1Q8NGQ5 310 aa7.43□□□□□ -1.22
VPS29-203ENST00000546588 OTOSQ8NHW6 89 aa7.43□□□□□ -1.22
VPS29-203ENST00000546588 ABTB1Q969K4 478 aaPredicted RBP7.43□□□□□ -1.22
VPS29-203ENST00000546588 ISOC1Q96CN7 298 aa7.43□□□□□ -1.22
VPS29-203ENST00000546588 WDYHV1Q96HA8 205 aa7.43□□□□□ -1.22
VPS29-203ENST00000546588 BOD1Q96IK1 185 aa7.43□□□□□ -1.22
VPS29-203ENST00000546588 OR2M2Q96R28 347 aa7.43□□□□□ -1.22
VPS29-203ENST00000546588 WACQ9BTA9 647 aa7.43□□□□□ -1.22
VPS29-203ENST00000546588 FUNDC2Q9BWH2 189 aa7.43□□□□□ -1.22
VPS29-203ENST00000546588 CCDC90BQ9GZT6 254 aa7.43□□□□□ -1.22
VPS29-203ENST00000546588 C6orf62Q9GZU0 229 aaPredicted RBP7.43□□□□□ -1.22
VPS29-203ENST00000546588 SLC6A15Q9H2J7 730 aa7.43□□□□□ -1.22
VPS29-203ENST00000546588 MED29Q9NX70 200 aa7.43□□□□□ -1.22
VPS29-203ENST00000546588 PTTG2Q9NZH5 202 aa7.43□□□□□ -1.22
VPS29-203ENST00000546588 SPRR3Q9UBC9 169 aa7.43□□□□□ -1.22
VPS29-203ENST00000546588 CLCF1Q9UBD9 225 aa7.43□□□□□ -1.22
VPS29-203ENST00000546588 B3GNT3Q9Y2A9 372 aa7.43□□□□□ -1.22
VPS29-203ENST00000546588 LIPGQ9Y5X9 500 aa7.43□□□□□ -1.22
VPS29-203ENST00000546588 TMEM14AQ9Y6G1 99 aa7.43□□□□□ -1.22
VPS29-203ENST00000546588 GTF3C1Q12789 2109 aa7.42□□□□□ -1.22
VPS29-203ENST00000546588 A0A1W2PPH5 198 aa7.42□□□□□ -1.22
VPS29-203ENST00000546588 A0A1W2PQL4 384 aaPredicted RBP7.42□□□□□ -1.22
VPS29-203ENST00000546588 FAM166BA8MTA8 275 aa7.42□□□□□ -1.22
VPS29-203ENST00000546588 H3BMQ9 156 aa7.42□□□□□ -1.22
VPS29-203ENST00000546588 H3BSA7 217 aa7.42□□□□□ -1.22
VPS29-203ENST00000546588 GPR171O14626 319 aa7.42□□□□□ -1.22
VPS29-203ENST00000546588 SLC22A1O15245 554 aa7.42□□□□□ -1.22
VPS29-203ENST00000546588 KHDRBS3O75525 346 aaKnown RBP7.42□□□□□ -1.22
VPS29-203ENST00000546588 TRAPPC6AO75865 159 aa7.42□□□□□ -1.22
VPS29-203ENST00000546588 GYPBP06028 91 aa7.42□□□□□ -1.22
VPS29-203ENST00000546588 FCGR2AP12318 317 aa7.42□□□□□ -1.22
VPS29-203ENST00000546588 KLK2P20151 261 aa7.42□□□□□ -1.22
VPS29-203ENST00000546588 ALOX5APP20292 161 aa7.42□□□□□ -1.22
VPS29-203ENST00000546588 FGF9P31371 208 aaPredicted RBP7.42□□□□□ -1.22
VPS29-203ENST00000546588 DCTDP32321 178 aa7.42□□□□□ -1.22
VPS29-203ENST00000546588 WNT5AP41221 380 aa7.42□□□□□ -1.22
VPS29-203ENST00000546588 TGM4P49221 684 aa7.42□□□□□ -1.22
VPS29-203ENST00000546588 BIDP55957 195 aa7.42□□□□□ -1.22
VPS29-203ENST00000546588 PLGLB1Q02325 96 aa7.42□□□□□ -1.22
VPS29-203ENST00000546588 MELKQ14680 651 aa7.42□□□□□ -1.22
VPS29-203ENST00000546588 TBR1Q16650 682 aa7.42□□□□□ -1.22
VPS29-203ENST00000546588 C2orf76Q3KRA6 126 aa7.42□□□□□ -1.22
VPS29-203ENST00000546588 TIMM50Q3ZCQ8 353 aa7.42□□□□□ -1.22
VPS29-203ENST00000546588 KLHL12Q53G59 568 aa7.42□□□□□ -1.22
VPS29-203ENST00000546588 ARMCX4Q5H9R4 360 aa7.42□□□□□ -1.22
VPS29-203ENST00000546588 TMEM200BQ69YZ2 307 aa7.42□□□□□ -1.22
VPS29-203ENST00000546588 TMEM225Q6GV28 225 aa7.42□□□□□ -1.22
VPS29-203ENST00000546588 DEGS2Q6QHC5 323 aa7.42□□□□□ -1.22
VPS29-203ENST00000546588 LINC00299Q6ZSB3 139 aa7.42□□□□□ -1.22
VPS29-203ENST00000546588 FCRLAQ7L513 359 aa7.42□□□□□ -1.22
VPS29-203ENST00000546588 P2RY8Q86VZ1 359 aa7.42□□□□□ -1.22
VPS29-203ENST00000546588 PHC2Q8IXK0 858 aa7.42□□□□□ -1.22
VPS29-203ENST00000546588 SLC35F2Q8IXU6 374 aa7.42□□□□□ -1.22
VPS29-203ENST00000546588 C20orf196Q8IYI0 205 aa7.42□□□□□ -1.22
VPS29-203ENST00000546588 BCL6BQ8N143 479 aaPredicted RBP7.42□□□□□ -1.22
VPS29-203ENST00000546588 SLC24A4Q8NFF2 622 aa7.42□□□□□ -1.22
VPS29-203ENST00000546588 PNPLA2Q96AD5 504 aa7.42□□□□□ -1.22
VPS29-203ENST00000546588 ZMYND19Q96E35 227 aaPredicted RBP7.42□□□□□ -1.22
VPS29-203ENST00000546588 MRPL48Q96GC5 212 aaKnown RBP7.42□□□□□ -1.22
VPS29-203ENST00000546588 TXNDC15Q96J42 360 aa7.42□□□□□ -1.22
VPS29-203ENST00000546588 TSSK2Q96PF2 358 aa7.42□□□□□ -1.22
VPS29-203ENST00000546588 ZNF385AQ96PM9 386 aaKnown RBP7.42□□□□□ -1.22
VPS29-203ENST00000546588 TAAR6Q96RI8 345 aa7.42□□□□□ -1.22
VPS29-203ENST00000546588 INTS14Q96SY0 518 aa7.42□□□□□ -1.22
VPS29-203ENST00000546588 ALG8Q9BVK2 526 aa7.42□□□□□ -1.22
VPS29-203ENST00000546588 OR51V1Q9H2C8 321 aa7.42□□□□□ -1.22
VPS29-203ENST00000546588 WDR76Q9H967 626 aa7.42□□□□□ -1.22
VPS29-203ENST00000546588 SIAEQ9HAT2 523 aa7.42□□□□□ -1.22
VPS29-203ENST00000546588 COQ3Q9NZJ6 369 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms