RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 KRTAP27-1Q3LI81 207 aa12.12□□□□□ -0.47
RTN3-214ENST00000545432 ANKDD1AQ495B1 522 aa12.12□□□□□ -0.47
RTN3-214ENST00000545432 HIST2H3PS2Q5TEC6 136 aa12.12□□□□□ -0.47
RTN3-214ENST00000545432 SLC35E4Q6ICL7 350 aa12.12□□□□□ -0.47
RTN3-214ENST00000545432 WDR93Q6P2C0 686 aa12.12□□□□□ -0.47
RTN3-214ENST00000545432 HIST2H3AQ71DI3 136 aa12.12□□□□□ -0.47
RTN3-214ENST00000545432 DPP10Q8N608 796 aa12.12□□□□□ -0.47
RTN3-214ENST00000545432 OR1F12Q8NHA8 337 aa12.12□□□□□ -0.47
RTN3-214ENST00000545432 LHX4Q969G2 390 aa12.12□□□□□ -0.47
RTN3-214ENST00000545432 APOBEC3DQ96AK3 386 aaPredicted RBP12.12□□□□□ -0.47
RTN3-214ENST00000545432 PAIP2Q9BPZ3 127 aaKnown RBP12.12□□□□□ -0.47
RTN3-214ENST00000545432 SMURF1Q9HCE7 757 aa12.12□□□□□ -0.47
RTN3-214ENST00000545432 CCDC167Q9P0B6 97 aa12.12□□□□□ -0.47
RTN3-214ENST00000545432 KAAG1Q9UBP8 84 aa12.12□□□□□ -0.47
RTN3-214ENST00000545432 MED31Q9Y3C7 131 aa12.12□□□□□ -0.47
RTN3-214ENST00000545432 KPTNQ9Y664 436 aa12.12□□□□□ -0.47
RTN3-214ENST00000545432 TENM3Q9P273 2699 aa12.12□□□□□ -0.47
RTN3-214ENST00000545432 DNAH9Q9NYC9 4486 aa12.11□□□□□ -0.47
RTN3-214ENST00000545432 FBP2O00757 339 aa12.11□□□□□ -0.47
RTN3-214ENST00000545432 POLR3GO15318 223 aaPredicted RBP12.11□□□□□ -0.47
RTN3-214ENST00000545432 FAM20BO75063 409 aa12.11□□□□□ -0.47
RTN3-214ENST00000545432 ECDO95905 644 aaPredicted RBP12.11□□□□□ -0.47
RTN3-214ENST00000545432 FPR3P25089 353 aa12.11□□□□□ -0.47
RTN3-214ENST00000545432 EFNB2P52799 333 aa12.11□□□□□ -0.47
RTN3-214ENST00000545432 TOP3AQ13472 1001 aaPredicted RBP12.11□□□□□ -0.47
RTN3-214ENST00000545432 PIN1Q13526 163 aaPredicted RBP12.11□□□□□ -0.47
RTN3-214ENST00000545432 SELPLGQ14242 412 aa12.11□□□□□ -0.47
RTN3-214ENST00000545432 KCNJ8Q15842 424 aa12.11□□□□□ -0.47
RTN3-214ENST00000545432 KCNMB1Q16558 191 aa12.11□□□□□ -0.47
RTN3-214ENST00000545432 DHRS7BQ6IAN0 325 aaPredicted RBP12.11□□□□□ -0.47
RTN3-214ENST00000545432 C11orf88Q6PI97 169 aa12.11□□□□□ -0.47
RTN3-214ENST00000545432 Q6ZTK2 550 aa12.11□□□□□ -0.47
RTN3-214ENST00000545432 PLPP7Q8NBV4 271 aa12.11□□□□□ -0.47
RTN3-214ENST00000545432 LY6G5BQ8NDX9 201 aa12.11□□□□□ -0.47
RTN3-214ENST00000545432 CGREF1Q99674 301 aa12.11□□□□□ -0.47
RTN3-214ENST00000545432 CNTD2Q9H8S5 307 aa12.11□□□□□ -0.47
RTN3-214ENST00000545432 NECAP2Q9NVZ3 263 aa12.11□□□□□ -0.47
RTN3-214ENST00000545432 PTTG3PQ9NZH4 202 aa12.11□□□□□ -0.47
RTN3-214ENST00000545432 TEX13CA0A0J9YWL9 993 aa12.1□□□□□ -0.47
RTN3-214ENST00000545432 IGHV3-64DA0A0J9YX35 117 aa12.1□□□□□ -0.47
RTN3-214ENST00000545432 DBHP09172 617 aa12.1□□□□□ -0.47
RTN3-214ENST00000545432 FBP1P09467 338 aa12.1□□□□□ -0.47
RTN3-214ENST00000545432 IRF2P14316 349 aa12.1□□□□□ -0.47
RTN3-214ENST00000545432 KIR2DS4P43632 304 aa12.1□□□□□ -0.47
RTN3-214ENST00000545432 ARF6P62330 175 aa12.1□□□□□ -0.47
RTN3-214ENST00000545432 MPPED2Q15777 294 aa12.1□□□□□ -0.47
RTN3-214ENST00000545432 CYP51A1Q16850 503 aa12.1□□□□□ -0.47
RTN3-214ENST00000545432 CDONQ4KMG0 1287 aa12.1□□□□□ -0.47
RTN3-214ENST00000545432 C1orf94Q6P1W5 598 aa12.1□□□□□ -0.47
RTN3-214ENST00000545432 C19orf18Q8NEA5 215 aa12.1□□□□□ -0.47
RTN3-214ENST00000545432 OR11L1Q8NGX0 322 aa12.1□□□□□ -0.47
RTN3-214ENST00000545432 TECTBQ96PL2 329 aa12.1□□□□□ -0.47
RTN3-214ENST00000545432 ECSITQ9BQ95 431 aa12.1□□□□□ -0.47
RTN3-214ENST00000545432 CCDC28BQ9BUN5 200 aa12.1□□□□□ -0.47
RTN3-214ENST00000545432 TRIM36Q9NQ86 728 aa12.1□□□□□ -0.47
RTN3-214ENST00000545432 AURKAIP1Q9NWT8 199 aaPredicted RBP12.1□□□□□ -0.47
RTN3-214ENST00000545432 RNF7Q9UBF6 113 aa12.1□□□□□ -0.47
RTN3-214ENST00000545432 CAB39Q9Y376 341 aaPredicted RBP12.1□□□□□ -0.47
RTN3-214ENST00000545432 TMEM120BA0PK00 339 aa12.09□□□□□ -0.47
RTN3-214ENST00000545432 HLA-DPB1P04440 258 aa12.09□□□□□ -0.47
RTN3-214ENST00000545432 CTLA4P16410 223 aa12.09□□□□□ -0.47
RTN3-214ENST00000545432 VMACQ2NL98 169 aa12.09□□□□□ -0.47
RTN3-214ENST00000545432 OXLD1Q5BKU9 147 aa12.09□□□□□ -0.47
RTN3-214ENST00000545432 BTN2A1Q7KYR7 527 aa12.09□□□□□ -0.47
RTN3-214ENST00000545432 FAM122BQ7Z309 247 aa12.09□□□□□ -0.47
RTN3-214ENST00000545432 ANKRD42Q8N9B4 389 aa12.09□□□□□ -0.47
RTN3-214ENST00000545432 SCCPDHQ8NBX0 429 aa12.09□□□□□ -0.47
RTN3-214ENST00000545432 OR5R1Q8NH85 324 aa12.09□□□□□ -0.47
RTN3-214ENST00000545432 BPIFA2Q96DR5 249 aa12.09□□□□□ -0.47
RTN3-214ENST00000545432 COQ7Q99807 217 aa12.09□□□□□ -0.47
RTN3-214ENST00000545432 SH3GLB1Q9Y371 365 aa12.09□□□□□ -0.47
RTN3-214ENST00000545432 A0A1B0GVI7 797 aa12.08□□□□□ -0.48
RTN3-214ENST00000545432 RER1O15258 196 aa12.08□□□□□ -0.48
RTN3-214ENST00000545432 ADAM20O43506 726 aa12.08□□□□□ -0.48
RTN3-214ENST00000545432 XPNPEP2O43895 674 aa12.08□□□□□ -0.48
RTN3-214ENST00000545432 LHBP01229 141 aa12.08□□□□□ -0.48
RTN3-214ENST00000545432 GABRA5P31644 462 aa12.08□□□□□ -0.48
RTN3-214ENST00000545432 IDH3AP50213 366 aa12.08□□□□□ -0.48
RTN3-214ENST00000545432 MTPNP58546 118 aa12.08□□□□□ -0.48
RTN3-214ENST00000545432 TAS2R41P59536 307 aa12.08□□□□□ -0.48
RTN3-214ENST00000545432 HOXA4Q00056 320 aaPredicted RBP12.08□□□□□ -0.48
RTN3-214ENST00000545432 SLC26A7Q8TE54 656 aa12.08□□□□□ -0.48
RTN3-214ENST00000545432 TNFRSF14Q92956 283 aa12.08□□□□□ -0.48
RTN3-214ENST00000545432 ZNF583Q96ND8 569 aa12.08□□□□□ -0.48
RTN3-214ENST00000545432 RASSF4Q9H2L5 321 aa12.08□□□□□ -0.48
RTN3-214ENST00000545432 RPUSD1Q9UJJ7 312 aaKnown RBP12.08□□□□□ -0.48
RTN3-214ENST00000545432 BAG5Q9UL15 447 aa12.08□□□□□ -0.48
RTN3-214ENST00000545432 FAM96BQ9Y3D0 163 aa12.08□□□□□ -0.48
RTN3-214ENST00000545432 TRAV38-1A0A0B4J264 116 aa12.07□□□□□ -0.48
RTN3-214ENST00000545432 PRSS37A4D1T9 235 aa12.07□□□□□ -0.48
RTN3-214ENST00000545432 OR10H3O60404 316 aa12.07□□□□□ -0.48
RTN3-214ENST00000545432 VSIG8P0DPA2 414 aa12.07□□□□□ -0.48
RTN3-214ENST00000545432 IFI30P13284 250 aa12.07□□□□□ -0.48
RTN3-214ENST00000545432 ZNF26P17031 533 aaPredicted RBP12.07□□□□□ -0.48
RTN3-214ENST00000545432 GK2Q14410 553 aaPredicted RBP12.07□□□□□ -0.48
RTN3-214ENST00000545432 AGKQ53H12 422 aa12.07□□□□□ -0.48
RTN3-214ENST00000545432 MESTQ5EB52 335 aa12.07□□□□□ -0.48
RTN3-214ENST00000545432 PRAMEF6Q5VXH4 476 aa12.07□□□□□ -0.48
RTN3-214ENST00000545432 TEX36Q5VZQ5 186 aa12.07□□□□□ -0.48
RTN3-214ENST00000545432 CRIP3Q6Q6R5 217 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms